RNA–Protein interactions for RNA: ENST00000439724.7

SMAD3-202, Transcript of SMAD family member 3, humanhuman

TSL 1 (best) BASIC

Gene SMAD3, Length 1,530 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-202ENST00000439724 YY1AP1Q9H869 796 aa11.31□□□□□ -0.6
SMAD3-202ENST00000439724 PRM3Q9NNZ6 103 aa11.31□□□□□ -0.6
SMAD3-202ENST00000439724 FZD3Q9NPG1 666 aa11.31□□□□□ -0.6
SMAD3-202ENST00000439724 OLAHQ9NV23 265 aa11.31□□□□□ -0.6
SMAD3-202ENST00000439724 ZNF639Q9UID6 485 aa11.31□□□□□ -0.6
SMAD3-202ENST00000439724 SUFUQ9UMX1 484 aa11.31□□□□□ -0.6
SMAD3-202ENST00000439724 KCNK6Q9Y257 313 aa11.31□□□□□ -0.6
SMAD3-202ENST00000439724 BTBD3Q9Y2F9 522 aa11.31□□□□□ -0.6
SMAD3-202ENST00000439724 F5P12259 2224 aa11.31□□□□□ -0.6
SMAD3-202ENST00000439724 ARHGAP10A1A4S6 786 aa11.3□□□□□ -0.6
SMAD3-202ENST00000439724 DPPA5A6NC42 116 aa11.3□□□□□ -0.6
SMAD3-202ENST00000439724 CCDC85CA6NKD9 419 aa11.3□□□□□ -0.6
SMAD3-202ENST00000439724 CLIC1O00299 241 aa11.3□□□□□ -0.6
SMAD3-202ENST00000439724 RNASET2O00584 256 aaKnown RBP11.3□□□□□ -0.6
SMAD3-202ENST00000439724 ACOX3O15254 700 aa11.3□□□□□ -0.6
SMAD3-202ENST00000439724 YY2O15391 372 aa11.3□□□□□ -0.6
SMAD3-202ENST00000439724 SLC31A1O15431 190 aa11.3□□□□□ -0.6
SMAD3-202ENST00000439724 DEAF1O75398 565 aaPredicted RBP11.3□□□□□ -0.6
SMAD3-202ENST00000439724 CREG1O75629 220 aa11.3□□□□□ -0.6
SMAD3-202ENST00000439724 PRSS23O95084 383 aa11.3□□□□□ -0.6
SMAD3-202ENST00000439724 RASAL1O95294 804 aa11.3□□□□□ -0.6
SMAD3-202ENST00000439724 GLULP15104 373 aa11.3□□□□□ -0.6
SMAD3-202ENST00000439724 PKLRP30613 574 aa11.3□□□□□ -0.6
SMAD3-202ENST00000439724 MAT2AP31153 395 aaKnown RBP11.3□□□□□ -0.6
SMAD3-202ENST00000439724 RAB28P51157 221 aa11.3□□□□□ -0.6
SMAD3-202ENST00000439724 CCR8P51685 355 aa11.3□□□□□ -0.6
SMAD3-202ENST00000439724 SLC14A1Q13336 389 aa11.3□□□□□ -0.6
SMAD3-202ENST00000439724 UAP1L1Q3KQV9 507 aa11.3□□□□□ -0.6
SMAD3-202ENST00000439724 C6orf52Q5T4I8 152 aa11.3□□□□□ -0.6
SMAD3-202ENST00000439724 ERICH5Q6P6B1 374 aa11.3□□□□□ -0.6
SMAD3-202ENST00000439724 IKBIPQ70UQ0 350 aa11.3□□□□□ -0.6
SMAD3-202ENST00000439724 R3HCC1LQ7Z5L2 792 aaKnown RBP11.3□□□□□ -0.6
SMAD3-202ENST00000439724 CLECL1Q8IZS7 167 aa11.3□□□□□ -0.6
SMAD3-202ENST00000439724 C10orf111Q8N326 155 aa11.3□□□□□ -0.6
SMAD3-202ENST00000439724 SLC44A3Q8N4M1 653 aa11.3□□□□□ -0.6
SMAD3-202ENST00000439724 CBR4Q8N4T8 237 aa11.3□□□□□ -0.6
SMAD3-202ENST00000439724 C2orf73Q8N5S3 287 aaPredicted RBP11.3□□□□□ -0.6
SMAD3-202ENST00000439724 LINC01555Q8NAE3 123 aa11.3□□□□□ -0.6
SMAD3-202ENST00000439724 OR2L8Q8NGY9 312 aa11.3□□□□□ -0.6
SMAD3-202ENST00000439724 SH3KBP1Q96B97 665 aa11.3□□□□□ -0.6
SMAD3-202ENST00000439724 MTERF3Q96E29 417 aa11.3□□□□□ -0.6
SMAD3-202ENST00000439724 MSANTD3Q96H12 275 aa11.3□□□□□ -0.6
SMAD3-202ENST00000439724 OR2M4Q96R27 311 aa11.3□□□□□ -0.6
SMAD3-202ENST00000439724 BDH2Q9BUT1 245 aa11.3□□□□□ -0.6
SMAD3-202ENST00000439724 ACAT2Q9BWD1 397 aa11.3□□□□□ -0.6
SMAD3-202ENST00000439724 MS4A8Q9BY19 250 aa11.3□□□□□ -0.6
SMAD3-202ENST00000439724 MAGIXQ9H6Y5 334 aa11.3□□□□□ -0.6
SMAD3-202ENST00000439724 FGF22Q9HCT0 170 aa11.3□□□□□ -0.6
SMAD3-202ENST00000439724 DCAF13Q9NV06 445 aaKnown RBP11.3□□□□□ -0.6
SMAD3-202ENST00000439724 CUEDC1Q9NWM3 386 aaPredicted RBP11.3□□□□□ -0.6
SMAD3-202ENST00000439724 UBAP1Q9NZ09 502 aa11.3□□□□□ -0.6
SMAD3-202ENST00000439724 AHSPQ9NZD4 102 aa11.3□□□□□ -0.6
SMAD3-202ENST00000439724 LIMD1Q9UGP4 676 aa11.3□□□□□ -0.6
SMAD3-202ENST00000439724 OAZ3Q9UMX2 235 aa11.3□□□□□ -0.6
SMAD3-202ENST00000439724 EXO1Q9UQ84 846 aaKnown RBP11.3□□□□□ -0.6
SMAD3-202ENST00000439724 AK5Q9Y6K8 562 aa11.3□□□□□ -0.6
SMAD3-202ENST00000439724 V9GYQ6 96 aa11.3□□□□□ -0.6
SMAD3-202ENST00000439724 C1orf226A1L170 272 aa11.3□□□□□ -0.6
SMAD3-202ENST00000439724 PRSS38A1L453 326 aa11.3□□□□□ -0.6
SMAD3-202ENST00000439724 CLOCKO15516 846 aa11.3□□□□□ -0.6
SMAD3-202ENST00000439724 KLHL18O94889 574 aa11.3□□□□□ -0.6
SMAD3-202ENST00000439724 FURINP09958 794 aa11.3□□□□□ -0.6
SMAD3-202ENST00000439724 ACADMP11310 421 aa11.3□□□□□ -0.6
SMAD3-202ENST00000439724 ENGP17813 658 aa11.3□□□□□ -0.6
SMAD3-202ENST00000439724 NDUFV2P19404 249 aa11.3□□□□□ -0.6
SMAD3-202ENST00000439724 PPIBP23284 216 aaKnown RBP11.3□□□□□ -0.6
SMAD3-202ENST00000439724 NFATC4Q14934 902 aa11.3□□□□□ -0.6
SMAD3-202ENST00000439724 CLCA4Q14CN2 919 aa11.3□□□□□ -0.6
SMAD3-202ENST00000439724 RBBP5Q15291 538 aaKnown RBP11.3□□□□□ -0.6
SMAD3-202ENST00000439724 ZNF385BQ569K4 471 aa11.3□□□□□ -0.6
SMAD3-202ENST00000439724 CPZQ66K79 652 aa11.3□□□□□ -0.6
SMAD3-202ENST00000439724 FAM71E1Q6IPT2 247 aa11.3□□□□□ -0.6
SMAD3-202ENST00000439724 ANKRD26P1Q6NSI1 321 aa11.3□□□□□ -0.6
SMAD3-202ENST00000439724 ZNF621Q6ZSS3 439 aa11.3□□□□□ -0.6
SMAD3-202ENST00000439724 ZNF551Q7Z340 670 aaPredicted RBP11.3□□□□□ -0.6
SMAD3-202ENST00000439724 SLC9B2Q86UD5 537 aa11.3□□□□□ -0.6
SMAD3-202ENST00000439724 FAM124AQ86V42 546 aa11.3□□□□□ -0.6
SMAD3-202ENST00000439724 PGBD3Q8N328 593 aa11.3□□□□□ -0.6
SMAD3-202ENST00000439724 GOT1L1Q8NHS2 421 aaPredicted RBP11.3□□□□□ -0.6
SMAD3-202ENST00000439724 WDR48Q8TAF3 677 aa11.3□□□□□ -0.6
SMAD3-202ENST00000439724 C16orf78Q8WTQ4 265 aa11.3□□□□□ -0.6
SMAD3-202ENST00000439724 SNX19Q92543 992 aa11.3□□□□□ -0.6
SMAD3-202ENST00000439724 NCLNQ969V3 563 aa11.3□□□□□ -0.6
SMAD3-202ENST00000439724 NRTNQ99748 197 aa11.3□□□□□ -0.6
SMAD3-202ENST00000439724 SPATA9Q9BWV2 254 aa11.3□□□□□ -0.6
SMAD3-202ENST00000439724 CARS2Q9HA77 564 aaKnown RBP11.3□□□□□ -0.6
SMAD3-202ENST00000439724 KCNK12Q9HB15 430 aa11.3□□□□□ -0.6
SMAD3-202ENST00000439724 IMP3Q9NV31 184 aaKnown RBP11.3□□□□□ -0.6
SMAD3-202ENST00000439724 ATAD3AQ9NVI7 634 aa11.3□□□□□ -0.6
SMAD3-202ENST00000439724 MOSPD1Q9UJG1 213 aa11.3□□□□□ -0.6
SMAD3-202ENST00000439724 CORO2BQ9UQ03 480 aa11.3□□□□□ -0.6
SMAD3-202ENST00000439724 ERVK-11Q9UQG0 969 aa11.3□□□□□ -0.6
SMAD3-202ENST00000439724 PLEKHM1Q9Y4G2 1056 aa11.3□□□□□ -0.6
SMAD3-202ENST00000439724 GPSM3Q9Y4H4 160 aa11.3□□□□□ -0.6
SMAD3-202ENST00000439724 PCDHB11Q9Y5F2 797 aa11.3□□□□□ -0.6
SMAD3-202ENST00000439724 ANKDD1BA6NHY2 528 aa11.29□□□□□ -0.6
SMAD3-202ENST00000439724 LATO43561 262 aa11.29□□□□□ -0.6
SMAD3-202ENST00000439724 CPSF4O95639 269 aaKnown RBP11.29□□□□□ -0.6
SMAD3-202ENST00000439724 TBX6O95947 436 aaPredicted RBP11.29□□□□□ -0.6
SMAD3-202ENST00000439724 ABCB1P08183 1280 aaPredicted RBP11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms