RNA–Protein interactions for RNA: ENST00000439717.2

HSPG2-206, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 637 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-206ENST00000439717 PRKAR1AP10644 381 aa11.24□□□□□ -0.61
HSPG2-206ENST00000439717 PYGBP11216 843 aa11.24□□□□□ -0.61
HSPG2-206ENST00000439717 EPB42P16452 691 aa11.24□□□□□ -0.61
HSPG2-206ENST00000439717 KRT15P19012 456 aa11.24□□□□□ -0.61
HSPG2-206ENST00000439717 EPORP19235 508 aa11.24□□□□□ -0.61
HSPG2-206ENST00000439717 VARSP26640 1264 aaKnown RBP11.24□□□□□ -0.61
HSPG2-206ENST00000439717 SLCO1A2P46721 670 aa11.24□□□□□ -0.61
HSPG2-206ENST00000439717 OR1D4P47884 311 aa11.24□□□□□ -0.61
HSPG2-206ENST00000439717 AVPR1BP47901 424 aa11.24□□□□□ -0.61
HSPG2-206ENST00000439717 PIK3CGP48736 1102 aa11.24□□□□□ -0.61
HSPG2-206ENST00000439717 AGTR2P50052 363 aa11.24□□□□□ -0.61
HSPG2-206ENST00000439717 RPS18P62269 152 aaKnown RBP11.24□□□□□ -0.61
HSPG2-206ENST00000439717 CYP4F2P78329 520 aa11.24□□□□□ -0.61
HSPG2-206ENST00000439717 RGS1Q08116 209 aa11.24□□□□□ -0.61
HSPG2-206ENST00000439717 IFFO1Q0D2I5 559 aa11.24□□□□□ -0.61
HSPG2-206ENST00000439717 DSG2Q14126 1118 aa11.24□□□□□ -0.61
HSPG2-206ENST00000439717 E2F2Q14209 437 aa11.24□□□□□ -0.61
HSPG2-206ENST00000439717 ERV3-1Q14264 604 aa11.24□□□□□ -0.61
HSPG2-206ENST00000439717 SLBPQ14493 270 aaKnown RBP eCLIP11.24□□□□□ -0.61
HSPG2-206ENST00000439717 RBBP5Q15291 538 aaKnown RBP11.24□□□□□ -0.61
HSPG2-206ENST00000439717 HIST2H2ACQ16777 129 aaPredicted RBP11.24□□□□□ -0.61
HSPG2-206ENST00000439717 XKR6Q5GH73 641 aa11.24□□□□□ -0.61
HSPG2-206ENST00000439717 PAGE2BQ5JRK9 111 aa11.24□□□□□ -0.61
HSPG2-206ENST00000439717 HIST2H2AA3Q6FI13 130 aa11.24□□□□□ -0.61
HSPG2-206ENST00000439717 NIPAL1Q6NVV3 410 aa11.24□□□□□ -0.61
HSPG2-206ENST00000439717 TMIGD1Q6UXZ0 262 aa11.24□□□□□ -0.61
HSPG2-206ENST00000439717 COX15Q7KZN9 410 aa11.24□□□□□ -0.61
HSPG2-206ENST00000439717 ZNF740Q8NDX6 193 aa11.24□□□□□ -0.61
HSPG2-206ENST00000439717 OR2Y1Q8NGV0 311 aa11.24□□□□□ -0.61
HSPG2-206ENST00000439717 EPS8L3Q8TE67 593 aaKnown RBP11.24□□□□□ -0.61
HSPG2-206ENST00000439717 THAP4Q8WY91 577 aa11.24□□□□□ -0.61
HSPG2-206ENST00000439717 UBE2E3Q969T4 207 aa11.24□□□□□ -0.61
HSPG2-206ENST00000439717 COL26A1Q96A83 441 aa11.24□□□□□ -0.61
HSPG2-206ENST00000439717 UBL7Q96S82 380 aaPredicted RBP11.24□□□□□ -0.61
HSPG2-206ENST00000439717 SPNS1Q9H2V7 528 aa11.24□□□□□ -0.61
HSPG2-206ENST00000439717 NXT1Q9UKK6 140 aaKnown RBP11.24□□□□□ -0.61
HSPG2-206ENST00000439717 POLHQ9Y253 713 aa11.24□□□□□ -0.61
HSPG2-206ENST00000439717 ASB1Q9Y576 335 aa11.24□□□□□ -0.61
HSPG2-206ENST00000439717 ANGPTL3Q9Y5C1 460 aa11.24□□□□□ -0.61
HSPG2-206ENST00000439717 SLC22A7Q9Y694 548 aa11.24□□□□□ -0.61
HSPG2-206ENST00000439717 SPTBP11277 2137 aa11.24□□□□□ -0.61
HSPG2-206ENST00000439717 PTPRQQ9UMZ3 2332 aa11.23□□□□□ -0.61
HSPG2-206ENST00000439717 IGLV3-12A0A075B6K2 115 aa11.23□□□□□ -0.61
HSPG2-206ENST00000439717 URADA6NGE7 173 aa11.23□□□□□ -0.61
HSPG2-206ENST00000439717 SMIM23A6NLE4 172 aa11.23□□□□□ -0.61
HSPG2-206ENST00000439717 VSTM2BA6NLU5 285 aa11.23□□□□□ -0.61
HSPG2-206ENST00000439717 GOLGA8RI6L899 631 aa11.23□□□□□ -0.61
HSPG2-206ENST00000439717 ERVH48-1M5A8F1 160 aa11.23□□□□□ -0.61
HSPG2-206ENST00000439717 TK2O00142 265 aa11.23□□□□□ -0.61
HSPG2-206ENST00000439717 FOXS1O43638 330 aa11.23□□□□□ -0.61
HSPG2-206ENST00000439717 PRAMEF4O60810 478 aa11.23□□□□□ -0.61
HSPG2-206ENST00000439717 WFS1O76024 890 aa11.23□□□□□ -0.61
HSPG2-206ENST00000439717 NSA2O95478 260 aaKnown RBP11.23□□□□□ -0.61
HSPG2-206ENST00000439717 SERPINA6P08185 405 aa11.23□□□□□ -0.61
HSPG2-206ENST00000439717 TAC1P20366 129 aa11.23□□□□□ -0.61
HSPG2-206ENST00000439717 FBLP22087 321 aaKnown RBP11.23□□□□□ -0.61
HSPG2-206ENST00000439717 FOLR3P41439 243 aa11.23□□□□□ -0.61
HSPG2-206ENST00000439717 SKP1P63208 163 aa11.23□□□□□ -0.61
HSPG2-206ENST00000439717 NFKB2Q00653 900 aa11.23□□□□□ -0.61
HSPG2-206ENST00000439717 IRF8Q02556 426 aa11.23□□□□□ -0.61
HSPG2-206ENST00000439717 CHIT1Q13231 466 aa11.23□□□□□ -0.61
HSPG2-206ENST00000439717 DOC2AQ14183 400 aa11.23□□□□□ -0.61
HSPG2-206ENST00000439717 SSPNQ14714 243 aa11.23□□□□□ -0.61
HSPG2-206ENST00000439717 SLC9A5Q14940 896 aa11.23□□□□□ -0.61
HSPG2-206ENST00000439717 HERC3Q15034 1050 aa11.23□□□□□ -0.61
HSPG2-206ENST00000439717 NKG7Q16617 165 aa11.23□□□□□ -0.61
HSPG2-206ENST00000439717 PRAMEF9Q5VWM5 478 aa11.23□□□□□ -0.61
HSPG2-206ENST00000439717 BORAQ6PGQ7 559 aa11.23□□□□□ -0.61
HSPG2-206ENST00000439717 SH2D5Q6ZV89 423 aa11.23□□□□□ -0.61
HSPG2-206ENST00000439717 CYP4X1Q8N118 509 aa11.23□□□□□ -0.61
HSPG2-206ENST00000439717 TMEM151AQ8N4L1 468 aa11.23□□□□□ -0.61
HSPG2-206ENST00000439717 METTL27Q8N6F8 245 aaPredicted RBP11.23□□□□□ -0.61
HSPG2-206ENST00000439717 TEX9Q8N6V9 391 aa11.23□□□□□ -0.61
HSPG2-206ENST00000439717 PTGR2Q8N8N7 351 aaPredicted RBP11.23□□□□□ -0.61
HSPG2-206ENST00000439717 ANKRD53Q8N9V6 530 aa11.23□□□□□ -0.61
HSPG2-206ENST00000439717 KCT2Q8NC54 265 aa11.23□□□□□ -0.61
HSPG2-206ENST00000439717 LSM14AQ8ND56 463 aaKnown RBP11.23□□□□□ -0.61
HSPG2-206ENST00000439717 ZDHHC19Q8WVZ1 309 aaPredicted RBP11.23□□□□□ -0.61
HSPG2-206ENST00000439717 TTC9Q92623 222 aa11.23□□□□□ -0.61
HSPG2-206ENST00000439717 NACC2Q96BF6 587 aa11.23□□□□□ -0.61
HSPG2-206ENST00000439717 MMABQ96EY8 250 aaPredicted RBP11.23□□□□□ -0.61
HSPG2-206ENST00000439717 WBP1Q96G27 269 aa11.23□□□□□ -0.61
HSPG2-206ENST00000439717 IP6K3Q96PC2 410 aa11.23□□□□□ -0.61
HSPG2-206ENST00000439717 ANKHQ9HCJ1 492 aa11.23□□□□□ -0.61
HSPG2-206ENST00000439717 TMEM216Q9P0N5 145 aa11.23□□□□□ -0.61
HSPG2-206ENST00000439717 ZNF282Q9UDV7 671 aaPredicted RBP11.23□□□□□ -0.61
HSPG2-206ENST00000439717 PTRH2Q9Y3E5 179 aaKnown RBP11.23□□□□□ -0.61
HSPG2-206ENST00000439717 MAU2Q9Y6X3 613 aa11.23□□□□□ -0.61
HSPG2-206ENST00000439717 NBEAQ8NFP9 2946 aa11.22□□□□□ -0.61
HSPG2-206ENST00000439717 A0A0A6YYC8 382 aaPredicted RBP11.22□□□□□ -0.61
HSPG2-206ENST00000439717 A0A1W2PPM1 405 aa11.22□□□□□ -0.61
HSPG2-206ENST00000439717 TLDC2A0PJX2 215 aa11.22□□□□□ -0.61
HSPG2-206ENST00000439717 CDC14CA4D256 554 aa11.22□□□□□ -0.61
HSPG2-206ENST00000439717 ANKDD1BA6NHY2 528 aa11.22□□□□□ -0.61
HSPG2-206ENST00000439717 I3L1I5 382 aaPredicted RBP11.22□□□□□ -0.61
HSPG2-206ENST00000439717 E2F3O00716 465 aa11.22□□□□□ -0.61
HSPG2-206ENST00000439717 UGDHO60701 494 aa11.22□□□□□ -0.61
HSPG2-206ENST00000439717 GLRA3O75311 464 aa11.22□□□□□ -0.61
HSPG2-206ENST00000439717 CLEC3AO75596 197 aa11.22□□□□□ -0.61
HSPG2-206ENST00000439717 STATHP02808 62 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms