RNA–Protein interactions for RNA: ENST00000439211.6

DHFR-201, Transcript of dihydrofolate reductase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DHFR, Length 3,917 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DHFR-201ENST00000439211 HDHD2Q9H0R4 259 aa15.3■□□□□ 0.04
DHFR-201ENST00000439211 TMEM248Q9NWD8 314 aa15.3■□□□□ 0.04
DHFR-201ENST00000439211 CEP350Q5VT06 3117 aa15.3■□□□□ 0.04
DHFR-201ENST00000439211 TRAV20A0A0B4J274 112 aa15.3■□□□□ 0.04
DHFR-201ENST00000439211 SH3BGRLO75368 114 aa15.3■□□□□ 0.04
DHFR-201ENST00000439211 ZNF254O75437 659 aa15.3■□□□□ 0.04
DHFR-201ENST00000439211 TRAPPC2P0DI81 140 aa15.3■□□□□ 0.04
DHFR-201ENST00000439211 TRAPPC2BP0DI82 140 aa15.3■□□□□ 0.04
DHFR-201ENST00000439211 OGNP20774 298 aaKnown RBP15.3■□□□□ 0.04
DHFR-201ENST00000439211 PTPRRQ15256 657 aa15.3■□□□□ 0.04
DHFR-201ENST00000439211 FAM174BQ3ZCQ3 159 aa15.3■□□□□ 0.04
DHFR-201ENST00000439211 ENPP6Q6UWR7 440 aa15.3■□□□□ 0.04
DHFR-201ENST00000439211 SLC34A3Q8N130 599 aa15.3■□□□□ 0.04
DHFR-201ENST00000439211 GPR151Q8TDV0 419 aa15.3■□□□□ 0.04
DHFR-201ENST00000439211 ARNT2Q9HBZ2 717 aa15.3■□□□□ 0.04
DHFR-201ENST00000439211 SLAMF7Q9NQ25 335 aa15.3■□□□□ 0.04
DHFR-201ENST00000439211 OLA1Q9NTK5 396 aaKnown RBP15.3■□□□□ 0.04
DHFR-201ENST00000439211 PSME4Q14997 1843 aa15.3■□□□□ 0.04
DHFR-201ENST00000439211 RFPL3O75679 317 aa15.29■□□□□ 0.04
DHFR-201ENST00000439211 TEKQ02763 1124 aa15.29■□□□□ 0.04
DHFR-201ENST00000439211 C18orf21Q32NC0 220 aaPredicted RBP15.29■□□□□ 0.04
DHFR-201ENST00000439211 HSD17B12Q53GQ0 312 aa15.29■□□□□ 0.04
DHFR-201ENST00000439211 ADGRD2Q7Z7M1 963 aa15.29■□□□□ 0.04
DHFR-201ENST00000439211 ZNF605Q86T29 641 aa15.29■□□□□ 0.04
DHFR-201ENST00000439211 ANKRD46Q86W74 232 aa15.29■□□□□ 0.04
DHFR-201ENST00000439211 PGBD5Q8N414 524 aa15.29■□□□□ 0.04
DHFR-201ENST00000439211 NIPAL2Q9H841 368 aa15.29■□□□□ 0.04
DHFR-201ENST00000439211 DNAJC11Q9NVH1 559 aa15.29■□□□□ 0.04
DHFR-201ENST00000439211 SLC9A8Q9Y2E8 581 aa15.29■□□□□ 0.04
DHFR-201ENST00000439211 SMIM30A4D0T7 59 aa15.29■□□□□ 0.04
DHFR-201ENST00000439211 LCHNA4D1U4 455 aa15.29■□□□□ 0.04
DHFR-201ENST00000439211 ZNF98A6NK75 572 aa15.29■□□□□ 0.04
DHFR-201ENST00000439211 MUSKO15146 869 aa15.29■□□□□ 0.04
DHFR-201ENST00000439211 LRATO95237 230 aa15.29■□□□□ 0.04
DHFR-201ENST00000439211 SEMG2Q02383 582 aa15.29■□□□□ 0.04
DHFR-201ENST00000439211 LIMS2Q7Z4I7 341 aa15.29■□□□□ 0.04
DHFR-201ENST00000439211 SLC44A2Q8IWA5 706 aaPredicted RBP15.29■□□□□ 0.04
DHFR-201ENST00000439211 ARRDC2Q8TBH0 407 aa15.29■□□□□ 0.04
DHFR-201ENST00000439211 PYCR2Q96C36 320 aa15.29■□□□□ 0.04
DHFR-201ENST00000439211 PTPN18Q99952 460 aa15.29■□□□□ 0.04
DHFR-201ENST00000439211 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP15.29■□□□□ 0.04
DHFR-201ENST00000439211 PDP1Q9P0J1 537 aaPredicted RBP15.29■□□□□ 0.04
DHFR-201ENST00000439211 EIF3KQ9UBQ5 218 aaKnown RBP15.29■□□□□ 0.04
DHFR-201ENST00000439211 UBQLN2Q9UHD9 624 aa15.29■□□□□ 0.04
DHFR-201ENST00000439211 UGT2B17O75795 530 aa15.29■□□□□ 0.04
DHFR-201ENST00000439211 C1QBP02746 253 aa15.29■□□□□ 0.04
DHFR-201ENST00000439211 ASGR1P07306 291 aa15.29■□□□□ 0.04
DHFR-201ENST00000439211 SSTR4P31391 388 aa15.29■□□□□ 0.04
DHFR-201ENST00000439211 ATP5C1P36542 298 aaKnown RBP15.29■□□□□ 0.04
DHFR-201ENST00000439211 PSAPL1Q6NUJ1 521 aa15.29■□□□□ 0.04
DHFR-201ENST00000439211 CLDN19Q8N6F1 224 aa15.29■□□□□ 0.04
DHFR-201ENST00000439211 IPCEF1Q8WWN9 437 aaPredicted RBP15.29■□□□□ 0.04
DHFR-201ENST00000439211 TOE1Q96GM8 510 aaKnown RBP15.29■□□□□ 0.04
DHFR-201ENST00000439211 SORBS1Q9BX66 1292 aaKnown RBP15.29■□□□□ 0.04
DHFR-201ENST00000439211 PAK6Q9NQU5 681 aaPredicted RBP15.29■□□□□ 0.04
DHFR-201ENST00000439211 MYL12BO14950 172 aa15.28■□□□□ 0.04
DHFR-201ENST00000439211 CACNG3O60359 315 aa15.28■□□□□ 0.04
DHFR-201ENST00000439211 ULK1O75385 1050 aa15.28■□□□□ 0.04
DHFR-201ENST00000439211 CHRM5P08912 532 aaPredicted RBP15.28■□□□□ 0.04
DHFR-201ENST00000439211 HOXD8P13378 290 aaPredicted RBP15.28■□□□□ 0.04
DHFR-201ENST00000439211 MYL12AP19105 171 aa15.28■□□□□ 0.04
DHFR-201ENST00000439211 CENPAP49450 140 aa15.28■□□□□ 0.04
DHFR-201ENST00000439211 HTR6P50406 440 aa15.28■□□□□ 0.04
DHFR-201ENST00000439211 PTGR1Q14914 329 aa15.28■□□□□ 0.04
DHFR-201ENST00000439211 GPR19Q15760 415 aa15.28■□□□□ 0.04
DHFR-201ENST00000439211 RNF219Q5W0B1 726 aaPredicted RBP15.28■□□□□ 0.04
DHFR-201ENST00000439211 KANK2Q63ZY3 851 aa15.28■□□□□ 0.04
DHFR-201ENST00000439211 GPR153Q6NV75 609 aa15.28■□□□□ 0.04
DHFR-201ENST00000439211 FUBP1Q96AE4 644 aaKnown RBP15.28■□□□□ 0.04
DHFR-201ENST00000439211 CIDECQ96AQ7 238 aaPredicted RBP15.28■□□□□ 0.04
DHFR-201ENST00000439211 OR2A14Q96R47 310 aa15.28■□□□□ 0.04
DHFR-201ENST00000439211 OR52E6Q96RD3 313 aa15.28■□□□□ 0.04
DHFR-201ENST00000439211 ATOH8Q96SQ7 321 aa15.28■□□□□ 0.04
DHFR-201ENST00000439211 ASB8Q9H765 288 aa15.28■□□□□ 0.04
DHFR-201ENST00000439211 RGPD3A6NKT7 1758 aaPredicted RBP15.28■□□□□ 0.04
DHFR-201ENST00000439211 RGPD4Q7Z3J3 1758 aa15.28■□□□□ 0.04
DHFR-201ENST00000439211 FAM234BA2RU67 622 aa15.28■□□□□ 0.04
DHFR-201ENST00000439211 RAB19A4D1S5 217 aa15.28■□□□□ 0.04
DHFR-201ENST00000439211 INSIG1O15503 277 aa15.28■□□□□ 0.04
DHFR-201ENST00000439211 KDM4BO94953 1096 aa15.28■□□□□ 0.04
DHFR-201ENST00000439211 YBX1P67809 324 aaKnown RBP15.28■□□□□ 0.04
DHFR-201ENST00000439211 C2orf80Q0P641 193 aa15.28■□□□□ 0.04
DHFR-201ENST00000439211 NDUFAF5Q5TEU4 345 aa15.28■□□□□ 0.04
DHFR-201ENST00000439211 TMEM65Q6PI78 240 aa15.28■□□□□ 0.04
DHFR-201ENST00000439211 DTWD1Q8N5C7 304 aa15.28■□□□□ 0.04
DHFR-201ENST00000439211 ZNF366Q8N895 744 aa15.28■□□□□ 0.04
DHFR-201ENST00000439211 GDPD1Q8N9F7 314 aa15.28■□□□□ 0.04
DHFR-201ENST00000439211 ZNF675Q8TD23 568 aa15.28■□□□□ 0.04
DHFR-201ENST00000439211 CHAC2Q8WUX2 184 aa15.28■□□□□ 0.04
DHFR-201ENST00000439211 C1orf74Q96LT6 269 aa15.28■□□□□ 0.04
DHFR-201ENST00000439211 DERL2Q9GZP9 239 aa15.28■□□□□ 0.04
DHFR-201ENST00000439211 SCML2Q9UQR0 700 aa15.28■□□□□ 0.04
DHFR-201ENST00000439211 A0A0G2JPF8 293 aa15.28■□□□□ 0.04
DHFR-201ENST00000439211 PIPSLA2A3N6 862 aa15.28■□□□□ 0.04
DHFR-201ENST00000439211 HNRNPCL3B7ZW38 293 aa15.28■□□□□ 0.04
DHFR-201ENST00000439211 APOC3P02656 99 aa15.28■□□□□ 0.04
DHFR-201ENST00000439211 FGF4P08620 206 aa15.28■□□□□ 0.04
DHFR-201ENST00000439211 HNRNPCL4P0DMR1 293 aa15.28■□□□□ 0.04
DHFR-201ENST00000439211 MTHFD2P13995 350 aa15.28■□□□□ 0.04
DHFR-201ENST00000439211 SSTR2P30874 369 aa15.28■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms