RNA–Protein interactions for RNA: ENST00000438745.1

HMGB3P12-201, Transcript of high mobility group box 3 pseudogene 12, humanhuman

BASIC

Gene HMGB3P12, Length 556 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P12-201ENST00000438745 ARRDC1-AS1Q9H2J1 176 aa2.99□□□□□ -1.93
HMGB3P12-201ENST00000438745 UBE2ZQ9H832 354 aaPredicted RBP2.99□□□□□ -1.93
HMGB3P12-201ENST00000438745 SERINC1Q9NRX5 453 aa2.99□□□□□ -1.93
HMGB3P12-201ENST00000438745 ADPRHL2Q9NX46 363 aa2.99□□□□□ -1.93
HMGB3P12-201ENST00000438745 CACNG4Q9UBN1 327 aa2.99□□□□□ -1.93
HMGB3P12-201ENST00000438745 POLLQ9UGP5 575 aa2.99□□□□□ -1.93
HMGB3P12-201ENST00000438745 IL17BQ9UHF5 180 aa2.99□□□□□ -1.93
HMGB3P12-201ENST00000438745 DAPK2Q9UIK4 370 aa2.99□□□□□ -1.93
HMGB3P12-201ENST00000438745 CHD6Q8TD26 2715 aa2.99□□□□□ -1.93
HMGB3P12-201ENST00000438745 ACACBO00763 2458 aa2.99□□□□□ -1.93
HMGB3P12-201ENST00000438745 FAM208BQ5VWN6 2430 aa2.99□□□□□ -1.93
HMGB3P12-201ENST00000438745 HEG1Q9ULI3 1381 aa2.99□□□□□ -1.93
HMGB3P12-201ENST00000438745 CDH23Q9H251 3354 aa2.98□□□□□ -1.93
HMGB3P12-201ENST00000438745 MYO3BQ8WXR4 1341 aa2.98□□□□□ -1.93
HMGB3P12-201ENST00000438745 MAST4O15021 2626 aa2.98□□□□□ -1.93
HMGB3P12-201ENST00000438745 FLNBO75369 2602 aaKnown RBP2.98□□□□□ -1.93
HMGB3P12-201ENST00000438745 NEMP2A6NFY4 417 aa2.98□□□□□ -1.93
HMGB3P12-201ENST00000438745 NR5A2O00482 541 aa2.98□□□□□ -1.93
HMGB3P12-201ENST00000438745 CLIC2O15247 247 aa2.98□□□□□ -1.93
HMGB3P12-201ENST00000438745 WDPCPO95876 746 aa2.98□□□□□ -1.93
HMGB3P12-201ENST00000438745 FYNP06241 537 aa2.98□□□□□ -1.93
HMGB3P12-201ENST00000438745 ATP5BP06576 529 aaKnown RBP2.98□□□□□ -1.93
HMGB3P12-201ENST00000438745 CD48P09326 243 aa2.98□□□□□ -1.93
HMGB3P12-201ENST00000438745 ZNF883P0CG24 379 aa2.98□□□□□ -1.93
HMGB3P12-201ENST00000438745 CD22P20273 847 aa2.98□□□□□ -1.93
HMGB3P12-201ENST00000438745 CYP2B6P20813 491 aa2.98□□□□□ -1.93
HMGB3P12-201ENST00000438745 CHRNB4P30926 498 aa2.98□□□□□ -1.93
HMGB3P12-201ENST00000438745 MNDAP41218 407 aa2.98□□□□□ -1.93
HMGB3P12-201ENST00000438745 ZNF41P51814 821 aaPredicted RBP2.98□□□□□ -1.93
HMGB3P12-201ENST00000438745 VCPP55072 806 aaKnown RBP2.98□□□□□ -1.93
HMGB3P12-201ENST00000438745 POLR2LP62875 67 aaKnown RBP2.98□□□□□ -1.93
HMGB3P12-201ENST00000438745 LGALS3BPQ08380 585 aa2.98□□□□□ -1.93
HMGB3P12-201ENST00000438745 PPIL2Q13356 520 aa2.98□□□□□ -1.93
HMGB3P12-201ENST00000438745 VEZF1Q14119 521 aa2.98□□□□□ -1.93
HMGB3P12-201ENST00000438745 SYT14P1Q58G82 188 aa2.98□□□□□ -1.93
HMGB3P12-201ENST00000438745 TCTE1Q5JU00 501 aa2.98□□□□□ -1.93
HMGB3P12-201ENST00000438745 SPECC1Q5M775 1068 aa2.98□□□□□ -1.93
HMGB3P12-201ENST00000438745 SUSD4Q5VX71 490 aa2.98□□□□□ -1.93
HMGB3P12-201ENST00000438745 FAM198BQ6UWH4 519 aa2.98□□□□□ -1.93
HMGB3P12-201ENST00000438745 RBMS3Q6XE24 437 aaKnown RBP2.98□□□□□ -1.93
HMGB3P12-201ENST00000438745 KIF6Q6ZMV9 814 aa2.98□□□□□ -1.93
HMGB3P12-201ENST00000438745 CCDC186Q7Z3E2 898 aa2.98□□□□□ -1.93
HMGB3P12-201ENST00000438745 SLFN11Q7Z7L1 901 aa2.98□□□□□ -1.93
HMGB3P12-201ENST00000438745 RTN4RL2Q86UN3 420 aa2.98□□□□□ -1.93
HMGB3P12-201ENST00000438745 VSIG1Q86XK7 387 aa2.98□□□□□ -1.93
HMGB3P12-201ENST00000438745 ZNF383Q8NA42 475 aa2.98□□□□□ -1.93
HMGB3P12-201ENST00000438745 THAP8Q8NA92 274 aa2.98□□□□□ -1.93
HMGB3P12-201ENST00000438745 NPEPL1Q8NDH3 523 aa2.98□□□□□ -1.93
HMGB3P12-201ENST00000438745 GRHL3Q8TE85 626 aa2.98□□□□□ -1.93
HMGB3P12-201ENST00000438745 CCDC107Q8WV48 283 aa2.98□□□□□ -1.93
HMGB3P12-201ENST00000438745 ARNTL2Q8WYA1 636 aa2.98□□□□□ -1.93
HMGB3P12-201ENST00000438745 MOB3AQ96BX8 217 aa2.98□□□□□ -1.93
HMGB3P12-201ENST00000438745 SENP5Q96HI0 755 aaPredicted RBP2.98□□□□□ -1.93
HMGB3P12-201ENST00000438745 CFAP57Q96MR6 1250 aa2.98□□□□□ -1.93
HMGB3P12-201ENST00000438745 CPNE1Q99829 537 aa2.98□□□□□ -1.93
HMGB3P12-201ENST00000438745 URM1Q9BTM9 101 aaKnown RBP2.98□□□□□ -1.93
HMGB3P12-201ENST00000438745 ERVMER34-1Q9H9K5 563 aa2.98□□□□□ -1.93
HMGB3P12-201ENST00000438745 GKN1Q9NS71 199 aa2.98□□□□□ -1.93
HMGB3P12-201ENST00000438745 TBC1D7Q9P0N9 293 aa2.98□□□□□ -1.93
HMGB3P12-201ENST00000438745 LRWD1Q9UFC0 647 aa2.98□□□□□ -1.93
HMGB3P12-201ENST00000438745 MMP24Q9Y5R2 645 aa2.98□□□□□ -1.93
HMGB3P12-201ENST00000438745 C5orf42Q9H799 3197 aa2.98□□□□□ -1.93
HMGB3P12-201ENST00000438745 USP34Q70CQ2 3546 aa2.97□□□□□ -1.93
HMGB3P12-201ENST00000438745 CFAP47Q6ZTR5 3102 aa2.97□□□□□ -1.93
HMGB3P12-201ENST00000438745 IGLV9-49A0A0B4J1Y8 123 aa2.97□□□□□ -1.93
HMGB3P12-201ENST00000438745 A0A1B0GU03 582 aa2.97□□□□□ -1.93
HMGB3P12-201ENST00000438745 A0A1W2PPQ1 181 aa2.97□□□□□ -1.93
HMGB3P12-201ENST00000438745 ANKRD61A6NGH8 418 aa2.97□□□□□ -1.93
HMGB3P12-201ENST00000438745 PRR32B1ATL7 298 aa2.97□□□□□ -1.93
HMGB3P12-201ENST00000438745 AP5Z1O43299 807 aa2.97□□□□□ -1.93
HMGB3P12-201ENST00000438745 IGHV2-70P01814 119 aa2.97□□□□□ -1.93
HMGB3P12-201ENST00000438745 IGHV4-38-2P0DP08 117 aa2.97□□□□□ -1.93
HMGB3P12-201ENST00000438745 HAPLN1P10915 354 aaPredicted RBP2.97□□□□□ -1.93
HMGB3P12-201ENST00000438745 ZNF26P17031 533 aaPredicted RBP2.97□□□□□ -1.93
HMGB3P12-201ENST00000438745 PTAFRP25105 342 aa2.97□□□□□ -1.93
HMGB3P12-201ENST00000438745 CCND3P30281 292 aaPredicted RBP2.97□□□□□ -1.93
HMGB3P12-201ENST00000438745 PRKCIP41743 596 aa2.97□□□□□ -1.93
HMGB3P12-201ENST00000438745 B3GALT5-AS1P59052 145 aa2.97□□□□□ -1.93
HMGB3P12-201ENST00000438745 PPARDQ03181 441 aa2.97□□□□□ -1.93
HMGB3P12-201ENST00000438745 TEFQ10587 303 aa2.97□□□□□ -1.93
HMGB3P12-201ENST00000438745 SQLEQ14534 574 aa2.97□□□□□ -1.93
HMGB3P12-201ENST00000438745 ITPRIPL2Q3MIP1 535 aa2.97□□□□□ -1.93
HMGB3P12-201ENST00000438745 MCMDC2Q4G0Z9 681 aa2.97□□□□□ -1.93
HMGB3P12-201ENST00000438745 HERC4Q5GLZ8 1057 aaPredicted RBP2.97□□□□□ -1.93
HMGB3P12-201ENST00000438745 KRTAP5-4Q6L8H1 288 aa2.97□□□□□ -1.93
HMGB3P12-201ENST00000438745 C11orf63Q6NUN7 778 aa2.97□□□□□ -1.93
HMGB3P12-201ENST00000438745 PSRC1Q6PGN9 363 aaPredicted RBP2.97□□□□□ -1.93
HMGB3P12-201ENST00000438745 IL27RAQ6UWB1 636 aa2.97□□□□□ -1.93
HMGB3P12-201ENST00000438745 SUSD1Q6UWL2 747 aa2.97□□□□□ -1.93
HMGB3P12-201ENST00000438745 LINGO4Q6UY18 593 aa2.97□□□□□ -1.93
HMGB3P12-201ENST00000438745 ADCK2Q7Z695 626 aa2.97□□□□□ -1.93
HMGB3P12-201ENST00000438745 ISCA2Q86U28 154 aa2.97□□□□□ -1.93
HMGB3P12-201ENST00000438745 TLK2Q86UE8 772 aa2.97□□□□□ -1.93
HMGB3P12-201ENST00000438745 TICAM2Q86XR7 235 aa2.97□□□□□ -1.93
HMGB3P12-201ENST00000438745 FAM219AQ8IW50 185 aa2.97□□□□□ -1.93
HMGB3P12-201ENST00000438745 EID3Q8N140 333 aa2.97□□□□□ -1.93
HMGB3P12-201ENST00000438745 CCAR2Q8N163 923 aaKnown RBP2.97□□□□□ -1.93
HMGB3P12-201ENST00000438745 IQUBQ8NA54 791 aa2.97□□□□□ -1.93
HMGB3P12-201ENST00000438745 ADAD2Q8NCV1 583 aaKnown RBP2.97□□□□□ -1.93
HMGB3P12-201ENST00000438745 MAPK1IP1LQ8NDC0 245 aa2.97□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms