RNA–Protein interactions for RNA: ENST00000431146.6

USHBP1-203, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

TSL 2 BASIC

Gene USHBP1, Length 2,136 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-203ENST00000431146 EXO1Q9UQ84 846 aaKnown RBP16■□□□□ 0.15
USHBP1-203ENST00000431146 LRRC72A6NJI9 287 aa16■□□□□ 0.15
USHBP1-203ENST00000431146 SOX1O00570 391 aaPredicted RBP16■□□□□ 0.15
USHBP1-203ENST00000431146 GSTA4O15217 222 aa16■□□□□ 0.15
USHBP1-203ENST00000431146 PRMT3O60678 531 aa16■□□□□ 0.15
USHBP1-203ENST00000431146 GGT1P19440 569 aa16■□□□□ 0.15
USHBP1-203ENST00000431146 IL10P22301 178 aa16■□□□□ 0.15
USHBP1-203ENST00000431146 HSD17B2P37059 387 aa16■□□□□ 0.15
USHBP1-203ENST00000431146 RAB28P51157 221 aa16■□□□□ 0.15
USHBP1-203ENST00000431146 CTBSQ01459 385 aa16■□□□□ 0.15
USHBP1-203ENST00000431146 DUOXA1Q1HG43 343 aa16■□□□□ 0.15
USHBP1-203ENST00000431146 DPY19L1Q2PZI1 675 aa16■□□□□ 0.15
USHBP1-203ENST00000431146 SLC30A9Q6PML9 568 aa16■□□□□ 0.15
USHBP1-203ENST00000431146 ERMP1Q7Z2K6 904 aa16■□□□□ 0.15
USHBP1-203ENST00000431146 PROSER1Q86XN7 944 aa16■□□□□ 0.15
USHBP1-203ENST00000431146 ASB12Q8WXK4 309 aa16■□□□□ 0.15
USHBP1-203ENST00000431146 METTL2AQ96IZ6 378 aaKnown RBP16■□□□□ 0.15
USHBP1-203ENST00000431146 CENPKQ9BS16 269 aa16■□□□□ 0.15
USHBP1-203ENST00000431146 DUSP26Q9BV47 211 aa16■□□□□ 0.15
USHBP1-203ENST00000431146 TMEM168Q9H0V1 697 aa16■□□□□ 0.15
USHBP1-203ENST00000431146 COQ10BQ9H8M1 238 aa16■□□□□ 0.15
USHBP1-203ENST00000431146 SH3BP4Q9P0V3 963 aa16■□□□□ 0.15
USHBP1-203ENST00000431146 MAGEL2Q9UJ55 1249 aa16■□□□□ 0.15
USHBP1-203ENST00000431146 CYP8B1Q9UNU6 501 aa16■□□□□ 0.15
USHBP1-203ENST00000431146 ICKQ9UPZ9 632 aa16■□□□□ 0.15
USHBP1-203ENST00000431146 ANKDD1BA6NHY2 528 aa15.99■□□□□ 0.15
USHBP1-203ENST00000431146 RTCAO00442 366 aaKnown RBP15.99■□□□□ 0.15
USHBP1-203ENST00000431146 KLHL18O94889 574 aa15.99■□□□□ 0.15
USHBP1-203ENST00000431146 SEMA4FO95754 770 aa15.99■□□□□ 0.15
USHBP1-203ENST00000431146 UBTFL6P0CB48 400 aaPredicted RBP15.99■□□□□ 0.15
USHBP1-203ENST00000431146 IMPDH2P12268 514 aa15.99■□□□□ 0.15
USHBP1-203ENST00000431146 UQCRBP14927 111 aa15.99■□□□□ 0.15
USHBP1-203ENST00000431146 CKMT2P17540 419 aa15.99■□□□□ 0.15
USHBP1-203ENST00000431146 PIK3CBP42338 1070 aa15.99■□□□□ 0.15
USHBP1-203ENST00000431146 ASMTP46597 345 aa15.99■□□□□ 0.15
USHBP1-203ENST00000431146 CCR8P51685 355 aa15.99■□□□□ 0.15
USHBP1-203ENST00000431146 KIAA1024LP59773 190 aa15.99■□□□□ 0.15
USHBP1-203ENST00000431146 FOLH1Q04609 750 aa15.99■□□□□ 0.15
USHBP1-203ENST00000431146 ZNF763Q0D2J5 394 aa15.99■□□□□ 0.15
USHBP1-203ENST00000431146 ZNF385BQ569K4 471 aa15.99■□□□□ 0.15
USHBP1-203ENST00000431146 CPTPQ5TA50 214 aa15.99■□□□□ 0.15
USHBP1-203ENST00000431146 ZNF621Q6ZSS3 439 aa15.99■□□□□ 0.15
USHBP1-203ENST00000431146 ZNF551Q7Z340 670 aaPredicted RBP15.99■□□□□ 0.15
USHBP1-203ENST00000431146 CLEC4FQ8N1N0 589 aa15.99■□□□□ 0.15
USHBP1-203ENST00000431146 OR8J2Q8NGG1 315 aa15.99■□□□□ 0.15
USHBP1-203ENST00000431146 PNPT1Q8TCS8 783 aaKnown RBP15.99■□□□□ 0.15
USHBP1-203ENST00000431146 SNX19Q92543 992 aa15.99■□□□□ 0.15
USHBP1-203ENST00000431146 UBE2E3Q969T4 207 aa15.99■□□□□ 0.15
USHBP1-203ENST00000431146 WDR92Q96MX6 357 aa15.99■□□□□ 0.15
USHBP1-203ENST00000431146 AIF1LQ9BQI0 150 aa15.99■□□□□ 0.15
USHBP1-203ENST00000431146 ANAPC2Q9UJX6 822 aa15.99■□□□□ 0.15
USHBP1-203ENST00000431146 CA14Q9ULX7 337 aa15.99■□□□□ 0.15
USHBP1-203ENST00000431146 IGKV1-8A0A0C4DH67 115 aa15.98■□□□□ 0.15
USHBP1-203ENST00000431146 SAC3D1A6NKF1 404 aa15.98■□□□□ 0.15
USHBP1-203ENST00000431146 RASGRP1O95267 797 aa15.98■□□□□ 0.15
USHBP1-203ENST00000431146 STATHP02808 62 aa15.98■□□□□ 0.15
USHBP1-203ENST00000431146 GPIP06744 558 aa15.98■□□□□ 0.15
USHBP1-203ENST00000431146 GLULP15104 373 aa15.98■□□□□ 0.15
USHBP1-203ENST00000431146 PHEXP78562 749 aa15.98■□□□□ 0.15
USHBP1-203ENST00000431146 GALNT18Q6P9A2 607 aa15.98■□□□□ 0.15
USHBP1-203ENST00000431146 MMP21Q8N119 569 aa15.98■□□□□ 0.15
USHBP1-203ENST00000431146 METTL4Q8N3J2 472 aa15.98■□□□□ 0.15
USHBP1-203ENST00000431146 RAB42Q8N4Z0 105 aa15.98■□□□□ 0.15
USHBP1-203ENST00000431146 FAM86B1Q8N7N1 296 aa15.98■□□□□ 0.15
USHBP1-203ENST00000431146 DENND6BQ8NEG7 585 aa15.98■□□□□ 0.15
USHBP1-203ENST00000431146 OR2A1Q8NGT9 310 aa15.98■□□□□ 0.15
USHBP1-203ENST00000431146 FAM120BQ96EK7 910 aaKnown RBP15.98■□□□□ 0.15
USHBP1-203ENST00000431146 F2RL3Q96RI0 385 aa15.98■□□□□ 0.15
USHBP1-203ENST00000431146 SLC29A1Q99808 456 aa15.98■□□□□ 0.15
USHBP1-203ENST00000431146 SH3GL1Q99961 368 aa15.98■□□□□ 0.15
USHBP1-203ENST00000431146 PELI2Q9HAT8 420 aa15.98■□□□□ 0.15
USHBP1-203ENST00000431146 WASH6PQ9NQA3 447 aa15.98■□□□□ 0.15
USHBP1-203ENST00000431146 COL6A3P12111 3177 aa15.98■□□□□ 0.15
USHBP1-203ENST00000431146 ELOVL7A1L3X0 281 aa15.98■□□□□ 0.15
USHBP1-203ENST00000431146 HNRNPRO43390 633 aaKnown RBP15.98■□□□□ 0.15
USHBP1-203ENST00000431146 OR1F1O43749 312 aa15.98■□□□□ 0.15
USHBP1-203ENST00000431146 LCMT2O60294 686 aaKnown RBP15.98■□□□□ 0.15
USHBP1-203ENST00000431146 CAPNS1P04632 268 aa15.98■□□□□ 0.15
USHBP1-203ENST00000431146 SRFP11831 508 aa15.98■□□□□ 0.15
USHBP1-203ENST00000431146 ZNF26P17031 533 aaPredicted RBP15.98■□□□□ 0.15
USHBP1-203ENST00000431146 PKLRP30613 574 aa15.98■□□□□ 0.15
USHBP1-203ENST00000431146 HPCAL1P37235 193 aa15.98■□□□□ 0.15
USHBP1-203ENST00000431146 TAS2R50P59544 299 aa15.98■□□□□ 0.15
USHBP1-203ENST00000431146 KLC1Q07866 573 aa15.98■□□□□ 0.15
USHBP1-203ENST00000431146 SFSWAPQ12872 951 aaKnown RBP15.98■□□□□ 0.15
USHBP1-203ENST00000431146 IRGCQ6NXR0 463 aa15.98■□□□□ 0.15
USHBP1-203ENST00000431146 CATSPER1Q8NEC5 780 aa15.98■□□□□ 0.15
USHBP1-203ENST00000431146 TRPV3Q8NET8 790 aa15.98■□□□□ 0.15
USHBP1-203ENST00000431146 ABHD11Q8NFV4 315 aa15.98■□□□□ 0.15
USHBP1-203ENST00000431146 OR4K1Q8NGD4 311 aa15.98■□□□□ 0.15
USHBP1-203ENST00000431146 C16orf78Q8WTQ4 265 aa15.98■□□□□ 0.15
USHBP1-203ENST00000431146 RNF145Q96MT1 663 aa15.98■□□□□ 0.15
USHBP1-203ENST00000431146 PCBD2Q9H0N5 130 aa15.98■□□□□ 0.15
USHBP1-203ENST00000431146 FAM120CQ9NX05 1096 aaKnown RBP15.98■□□□□ 0.15
USHBP1-203ENST00000431146 PLPP1O14494 284 aa15.97■□□□□ 0.15
USHBP1-203ENST00000431146 ANXA6P08133 673 aa15.97■□□□□ 0.15
USHBP1-203ENST00000431146 ABCB1P08183 1280 aaPredicted RBP15.97■□□□□ 0.15
USHBP1-203ENST00000431146 HOXB3P14651 431 aaPredicted RBP15.97■□□□□ 0.15
USHBP1-203ENST00000431146 PTX3P26022 381 aaPredicted RBP15.97■□□□□ 0.15
USHBP1-203ENST00000431146 HTR1BP28222 390 aa15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms