RNA–Protein interactions for RNA: ENST00000429578.5

LINC00887-203, long intergenic non-protein coding RNA 887, humanhuman

TSL 2 BASIC

Gene LINC00887, Length 1,717 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00887-203ENST00000429578 DDX39BQ13838 428 aaKnown RBP16.33■□□□□ 0.2
LINC00887-203ENST00000429578 XKR7Q5GH72 579 aa16.33■□□□□ 0.2
LINC00887-203ENST00000429578 RNF44Q7L0R7 432 aa16.33■□□□□ 0.2
LINC00887-203ENST00000429578 KMT5CQ86Y97 462 aa16.33■□□□□ 0.2
LINC00887-203ENST00000429578 GBP7Q8N8V2 638 aaPredicted RBP16.33■□□□□ 0.2
LINC00887-203ENST00000429578 MFSD9Q8NBP5 474 aa16.33■□□□□ 0.2
LINC00887-203ENST00000429578 DEFB124Q8NES8 71 aa16.33■□□□□ 0.2
LINC00887-203ENST00000429578 ZNF473Q8WTR7 871 aaKnown RBP16.33■□□□□ 0.2
LINC00887-203ENST00000429578 MAELQ96JY0 434 aaKnown RBP16.33■□□□□ 0.2
LINC00887-203ENST00000429578 C3orf30Q96M34 536 aa16.33■□□□□ 0.2
LINC00887-203ENST00000429578 FAM60AQ9NP50 221 aa16.33■□□□□ 0.2
LINC00887-203ENST00000429578 PPT2Q9UMR5 302 aa16.33■□□□□ 0.2
LINC00887-203ENST00000429578 AP1M2Q9Y6Q5 423 aa16.33■□□□□ 0.2
LINC00887-203ENST00000429578 MAGEB17A8MXT2 336 aa16.32■□□□□ 0.2
LINC00887-203ENST00000429578 D6RAR5 112 aa16.32■□□□□ 0.2
LINC00887-203ENST00000429578 MAP3K7O43318 606 aa16.32■□□□□ 0.2
LINC00887-203ENST00000429578 DIAPH2O60879 1101 aa16.32■□□□□ 0.2
LINC00887-203ENST00000429578 HSD3B1P14060 373 aa16.32■□□□□ 0.2
LINC00887-203ENST00000429578 HSD3B2P26439 372 aa16.32■□□□□ 0.2
LINC00887-203ENST00000429578 IDH3AP50213 366 aa16.32■□□□□ 0.2
LINC00887-203ENST00000429578 PHEXP78562 749 aa16.32■□□□□ 0.2
LINC00887-203ENST00000429578 CYP4F3Q08477 520 aa16.32■□□□□ 0.2
LINC00887-203ENST00000429578 SF3A3Q12874 501 aaKnown RBP eCLIP16.32■□□□□ 0.2
LINC00887-203ENST00000429578 CSTF3Q12996 717 aaKnown RBP16.32■□□□□ 0.2
LINC00887-203ENST00000429578 SPIDRQ14159 915 aa16.32■□□□□ 0.2
LINC00887-203ENST00000429578 SLC9B1Q4ZJI4 515 aa16.32■□□□□ 0.2
LINC00887-203ENST00000429578 SNAP47Q5SQN1 464 aa16.32■□□□□ 0.2
LINC00887-203ENST00000429578 Q6ZSR9 355 aa16.32■□□□□ 0.2
LINC00887-203ENST00000429578 VN1R5Q7Z5H4 357 aa16.32■□□□□ 0.2
LINC00887-203ENST00000429578 GLRX5Q86SX6 157 aa16.32■□□□□ 0.2
LINC00887-203ENST00000429578 RNF175Q8N4F7 328 aa16.32■□□□□ 0.2
LINC00887-203ENST00000429578 BCAS4Q8TDM0 211 aa16.32■□□□□ 0.2
LINC00887-203ENST00000429578 STON2Q8WXE9 905 aa16.32■□□□□ 0.2
LINC00887-203ENST00000429578 THAP11Q96EK4 314 aa16.32■□□□□ 0.2
LINC00887-203ENST00000429578 FCRL4Q96PJ5 515 aa16.32■□□□□ 0.2
LINC00887-203ENST00000429578 OR2A5Q96R48 311 aa16.32■□□□□ 0.2
LINC00887-203ENST00000429578 EBF4Q9BQW3 602 aa16.32■□□□□ 0.2
LINC00887-203ENST00000429578 PDE7BQ9NP56 450 aa16.32■□□□□ 0.2
LINC00887-203ENST00000429578 SOHLH2Q9NX45 425 aa16.32■□□□□ 0.2
LINC00887-203ENST00000429578 CCL27Q9Y4X3 112 aa16.32■□□□□ 0.2
LINC00887-203ENST00000429578 SCN3AQ9NY46 2000 aa16.32■□□□□ 0.2
LINC00887-203ENST00000429578 A0A0J9YVX5 310 aa16.31■□□□□ 0.2
LINC00887-203ENST00000429578 IGHV5-10-1A0A0J9YXX1 117 aa16.31■□□□□ 0.2
LINC00887-203ENST00000429578 ATP6AP2A0A1C7CYW4 349 aa16.31■□□□□ 0.2
LINC00887-203ENST00000429578 SLC28A1O00337 649 aa16.31■□□□□ 0.2
LINC00887-203ENST00000429578 SDHDO14521 159 aa16.31■□□□□ 0.2
LINC00887-203ENST00000429578 RGS14O43566 566 aa16.31■□□□□ 0.2
LINC00887-203ENST00000429578 CLEC3AO75596 197 aa16.31■□□□□ 0.2
LINC00887-203ENST00000429578 ATP6AP2O75787 350 aa16.31■□□□□ 0.2
LINC00887-203ENST00000429578 ANKRD34CP0C6C1 535 aa16.31■□□□□ 0.2
LINC00887-203ENST00000429578 THRAP10827 490 aa16.31■□□□□ 0.2
LINC00887-203ENST00000429578 EPHA3P29320 983 aa16.31■□□□□ 0.2
LINC00887-203ENST00000429578 ARFIP2P53365 341 aa16.31■□□□□ 0.2
LINC00887-203ENST00000429578 HSD11B2P80365 405 aa16.31■□□□□ 0.2
LINC00887-203ENST00000429578 TRIP6Q15654 476 aaKnown RBP16.31■□□□□ 0.2
LINC00887-203ENST00000429578 ZC3H12BQ5HYM0 836 aaKnown RBP16.31■□□□□ 0.2
LINC00887-203ENST00000429578 GKAP1Q5VSY0 366 aaPredicted RBP16.31■□□□□ 0.2
LINC00887-203ENST00000429578 TRPV3Q8NET8 790 aa16.31■□□□□ 0.2
LINC00887-203ENST00000429578 OR2T11Q8NH01 316 aa16.31■□□□□ 0.2
LINC00887-203ENST00000429578 C10orf82Q8WW14 230 aa16.31■□□□□ 0.2
LINC00887-203ENST00000429578 KLHL6Q8WZ60 621 aa16.31■□□□□ 0.2
LINC00887-203ENST00000429578 TMEM120AQ9BXJ8 343 aa16.31■□□□□ 0.2
LINC00887-203ENST00000429578 ACPTQ9BZG2 426 aa16.31■□□□□ 0.2
LINC00887-203ENST00000429578 ZNF768Q9H5H4 540 aaKnown RBP16.31■□□□□ 0.2
LINC00887-203ENST00000429578 WDR55Q9H6Y2 383 aaPredicted RBP16.31■□□□□ 0.2
LINC00887-203ENST00000429578 SYNPO2LQ9H987 977 aa16.31■□□□□ 0.2
LINC00887-203ENST00000429578 DMRT3Q9NQL9 472 aa16.31■□□□□ 0.2
LINC00887-203ENST00000429578 RIC8BQ9NVN3 520 aa16.31■□□□□ 0.2
LINC00887-203ENST00000429578 APOBEC2Q9Y235 224 aaKnown RBP16.31■□□□□ 0.2
LINC00887-203ENST00000429578 KIF26BQ2KJY2 2108 aa16.31■□□□□ 0.2
LINC00887-203ENST00000429578 A8MU76 341 aa16.31■□□□□ 0.2
LINC00887-203ENST00000429578 NDUFAB1O14561 156 aa16.31■□□□□ 0.2
LINC00887-203ENST00000429578 RFPL3O75679 317 aa16.31■□□□□ 0.2
LINC00887-203ENST00000429578 MLLT3P42568 568 aaPredicted RBP16.31■□□□□ 0.2
LINC00887-203ENST00000429578 SEPHS1P49903 392 aa16.31■□□□□ 0.2
LINC00887-203ENST00000429578 RPS13P62277 151 aaKnown RBP16.31■□□□□ 0.2
LINC00887-203ENST00000429578 CYP4F2P78329 520 aa16.31■□□□□ 0.2
LINC00887-203ENST00000429578 E2F1Q01094 437 aa16.31■□□□□ 0.2
LINC00887-203ENST00000429578 IMPG1Q17R60 797 aa16.31■□□□□ 0.2
LINC00887-203ENST00000429578 ARHGAP22Q7Z5H3 698 aa16.31■□□□□ 0.2
LINC00887-203ENST00000429578 DNAJC22Q8N4W6 341 aa16.31■□□□□ 0.2
LINC00887-203ENST00000429578 CREB3L4Q8TEY5 395 aa16.31■□□□□ 0.2
LINC00887-203ENST00000429578 TUBGCP3Q96CW5 907 aa16.31■□□□□ 0.2
LINC00887-203ENST00000429578 SLC41A2Q96JW4 573 aa16.31■□□□□ 0.2
LINC00887-203ENST00000429578 PRM3Q9NNZ6 103 aa16.31■□□□□ 0.2
LINC00887-203ENST00000429578 PCDHGA1Q9Y5H4 931 aa16.31■□□□□ 0.2
LINC00887-203ENST00000429578 CNOT1A5YKK6 2376 aaKnown RBP16.3■□□□□ 0.2
LINC00887-203ENST00000429578 GOLGA8QA0A0J9YX86 632 aa16.3■□□□□ 0.2
LINC00887-203ENST00000429578 GOLGA8OA6NCC3 632 aa16.3■□□□□ 0.2
LINC00887-203ENST00000429578 GOLGA8NF8WBI6 632 aa16.3■□□□□ 0.2
LINC00887-203ENST00000429578 VPS4BO75351 444 aa16.3■□□□□ 0.2
LINC00887-203ENST00000429578 TBX6O95947 436 aaPredicted RBP16.3■□□□□ 0.2
LINC00887-203ENST00000429578 TGFB1P01137 390 aa16.3■□□□□ 0.2
LINC00887-203ENST00000429578 NELFEP18615 380 aaKnown RBP16.3■□□□□ 0.2
LINC00887-203ENST00000429578 PRPH2P23942 346 aa16.3■□□□□ 0.2
LINC00887-203ENST00000429578 PTX3P26022 381 aaPredicted RBP16.3■□□□□ 0.2
LINC00887-203ENST00000429578 ARL4DP49703 201 aa16.3■□□□□ 0.2
LINC00887-203ENST00000429578 SHC2P98077 582 aa16.3■□□□□ 0.2
LINC00887-203ENST00000429578 HMGCS1Q01581 520 aa16.3■□□□□ 0.2
LINC00887-203ENST00000429578 FRMPD2BQ6IN97 320 aa16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms