RNA–Protein interactions for RNA: ENST00000427191.6

PTPN13-203, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN13, Length 8,487 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-203ENST00000427191 LATS1O95835 1130 aa14.04□□□□□ -0.16
PTPN13-203ENST00000427191 MLLT3P42568 568 aaPredicted RBP14.04□□□□□ -0.16
PTPN13-203ENST00000427191 ABHD18Q0P651 414 aa14.04□□□□□ -0.16
PTPN13-203ENST00000427191 TDGQ13569 410 aa14.04□□□□□ -0.16
PTPN13-203ENST00000427191 EML3Q32P44 896 aa14.04□□□□□ -0.16
PTPN13-203ENST00000427191 FZD10Q9ULW2 581 aa14.04□□□□□ -0.16
PTPN13-203ENST00000427191 FARS2O95363 451 aaKnown RBP14.04□□□□□ -0.16
PTPN13-203ENST00000427191 SLC16A8O95907 504 aa14.04□□□□□ -0.16
PTPN13-203ENST00000427191 GHRHRQ02643 423 aa14.04□□□□□ -0.16
PTPN13-203ENST00000427191 RAB41Q5JT25 222 aa14.04□□□□□ -0.16
PTPN13-203ENST00000427191 NRSN1Q8IZ57 195 aa14.04□□□□□ -0.16
PTPN13-203ENST00000427191 ZUFSPQ96AP4 578 aa14.04□□□□□ -0.16
PTPN13-203ENST00000427191 BCL7BQ9BQE9 202 aa14.04□□□□□ -0.16
PTPN13-203ENST00000427191 ZDHHC3Q9NYG2 299 aa14.04□□□□□ -0.16
PTPN13-203ENST00000427191 FBXW11Q9UKB1 542 aa14.04□□□□□ -0.16
PTPN13-203ENST00000427191 MAGEA8P43361 318 aa14.03□□□□□ -0.16
PTPN13-203ENST00000427191 KCTD18Q6PI47 426 aaPredicted RBP14.03□□□□□ -0.16
PTPN13-203ENST00000427191 GPR142Q7Z601 462 aa14.03□□□□□ -0.16
PTPN13-203ENST00000427191 AQP11Q8NBQ7 271 aa14.03□□□□□ -0.16
PTPN13-203ENST00000427191 ITFG2Q969R8 447 aa14.03□□□□□ -0.16
PTPN13-203ENST00000427191 ENAMQ9NRM1 1142 aa14.03□□□□□ -0.16
PTPN13-203ENST00000427191 GP1BBP13224 206 aa14.03□□□□□ -0.16
PTPN13-203ENST00000427191 S100A7P31151 101 aa14.03□□□□□ -0.16
PTPN13-203ENST00000427191 ZNF81P51508 661 aa14.03□□□□□ -0.16
PTPN13-203ENST00000427191 CARTPTQ16568 116 aa14.03□□□□□ -0.16
PTPN13-203ENST00000427191 SIDT2Q8NBJ9 832 aaKnown RBP14.03□□□□□ -0.16
PTPN13-203ENST00000427191 C10orf82Q8WW14 230 aa14.03□□□□□ -0.16
PTPN13-203ENST00000427191 TMEM234Q8WY98 164 aa14.03□□□□□ -0.16
PTPN13-203ENST00000427191 NTAN1Q96AB6 310 aa14.03□□□□□ -0.16
PTPN13-203ENST00000427191 KCNC2Q96PR1 638 aa14.03□□□□□ -0.16
PTPN13-203ENST00000427191 SULT4A1Q9BR01 284 aa14.03□□□□□ -0.16
PTPN13-203ENST00000427191 SLC7A11Q9UPY5 501 aa14.03□□□□□ -0.16
PTPN13-203ENST00000427191 NFAT5O94916 1531 aa14.03□□□□□ -0.16
PTPN13-203ENST00000427191 A0A1W2PP18 115 aa14.03□□□□□ -0.16
PTPN13-203ENST00000427191 XPNPEP2O43895 674 aa14.03□□□□□ -0.16
PTPN13-203ENST00000427191 FAM189A1O60320 539 aa14.03□□□□□ -0.16
PTPN13-203ENST00000427191 IL7P13232 177 aa14.03□□□□□ -0.16
PTPN13-203ENST00000427191 CD40LGP29965 261 aa14.03□□□□□ -0.16
PTPN13-203ENST00000427191 PPM1JQ5JR12 505 aa14.03□□□□□ -0.16
PTPN13-203ENST00000427191 MFSD3Q96ES6 412 aa14.03□□□□□ -0.16
PTPN13-203ENST00000427191 TXN2Q99757 166 aa14.03□□□□□ -0.16
PTPN13-203ENST00000427191 WNT9AO14904 365 aa14.03□□□□□ -0.16
PTPN13-203ENST00000427191 GANABQ14697 944 aaKnown RBP14.03□□□□□ -0.16
PTPN13-203ENST00000427191 TRAM2Q15035 370 aa14.03□□□□□ -0.16
PTPN13-203ENST00000427191 PRAMEF14Q5SWL7 426 aa14.03□□□□□ -0.16
PTPN13-203ENST00000427191 PRAMEF13Q5VWM6 474 aa14.03□□□□□ -0.16
PTPN13-203ENST00000427191 OR5B17Q8NGF7 314 aa14.03□□□□□ -0.16
PTPN13-203ENST00000427191 PMM1Q92871 262 aa14.03□□□□□ -0.16
PTPN13-203ENST00000427191 G6PC3Q9BUM1 346 aa14.03□□□□□ -0.16
PTPN13-203ENST00000427191 ADAMTS10Q9H324 1103 aa14.03□□□□□ -0.16
PTPN13-203ENST00000427191 HCN4Q9Y3Q4 1203 aa14.03□□□□□ -0.16
PTPN13-203ENST00000427191 EOMESO95936 686 aa14.03□□□□□ -0.16
PTPN13-203ENST00000427191 ZNF30P17039 623 aa14.03□□□□□ -0.16
PTPN13-203ENST00000427191 TSTQ16762 297 aaKnown RBP14.03□□□□□ -0.16
PTPN13-203ENST00000427191 SMYD5Q6GMV2 418 aa14.03□□□□□ -0.16
PTPN13-203ENST00000427191 PDE12Q6L8Q7 609 aaKnown RBP14.03□□□□□ -0.16
PTPN13-203ENST00000427191 ZCCHC10Q8TBK6 192 aa14.03□□□□□ -0.16
PTPN13-203ENST00000427191 TIGARQ9NQ88 270 aa14.03□□□□□ -0.16
PTPN13-203ENST00000427191 PCDHB11Q9Y5F2 797 aa14.03□□□□□ -0.16
PTPN13-203ENST00000427191 CREBL2O60519 120 aaPredicted RBP14.03□□□□□ -0.16
PTPN13-203ENST00000427191 DSC2Q02487 901 aa14.03□□□□□ -0.16
PTPN13-203ENST00000427191 GK3PQ14409 553 aa14.03□□□□□ -0.16
PTPN13-203ENST00000427191 DPYSL2Q16555 572 aa14.03□□□□□ -0.16
PTPN13-203ENST00000427191 DUSP28Q4G0W2 176 aa14.03□□□□□ -0.16
PTPN13-203ENST00000427191 SLC22A10Q63ZE4 541 aa14.03□□□□□ -0.16
PTPN13-203ENST00000427191 HMCESQ96FZ2 354 aa14.03□□□□□ -0.16
PTPN13-203ENST00000427191 MYCLP1P12525 358 aaPredicted RBP14.03□□□□□ -0.16
PTPN13-203ENST00000427191 NMBRP28336 390 aa14.03□□□□□ -0.16
PTPN13-203ENST00000427191 CXCL9Q07325 125 aa14.03□□□□□ -0.16
PTPN13-203ENST00000427191 CLCA4Q14CN2 919 aa14.03□□□□□ -0.16
PTPN13-203ENST00000427191 NADK2Q4G0N4 442 aa14.03□□□□□ -0.16
PTPN13-203ENST00000427191 EARS2Q5JPH6 523 aaKnown RBP14.03□□□□□ -0.16
PTPN13-203ENST00000427191 ASCC1Q8N9N2 400 aaKnown RBP14.03□□□□□ -0.16
PTPN13-203ENST00000427191 COQ8AQ8NI60 647 aa14.03□□□□□ -0.16
PTPN13-203ENST00000427191 FANK1Q8TC84 345 aa14.03□□□□□ -0.16
PTPN13-203ENST00000427191 FCRL5Q96RD9 977 aa14.03□□□□□ -0.16
PTPN13-203ENST00000427191 PHOX2BQ99453 314 aa14.03□□□□□ -0.16
PTPN13-203ENST00000427191 WACQ9BTA9 647 aa14.03□□□□□ -0.16
PTPN13-203ENST00000427191 SEPT4O43236 478 aa14.02□□□□□ -0.16
PTPN13-203ENST00000427191 MSI1O43347 362 aaKnown RBP14.02□□□□□ -0.16
PTPN13-203ENST00000427191 MMP3P08254 477 aa14.02□□□□□ -0.16
PTPN13-203ENST00000427191 CD52P31358 61 aa14.02□□□□□ -0.16
PTPN13-203ENST00000427191 ACTBP60709 375 aa14.02□□□□□ -0.16
PTPN13-203ENST00000427191 ACTG1P63261 375 aa14.02□□□□□ -0.16
PTPN13-203ENST00000427191 OR5T2Q8NGG2 359 aa14.02□□□□□ -0.16
PTPN13-203ENST00000427191 GNPDA2Q8TDQ7 276 aa14.02□□□□□ -0.16
PTPN13-203ENST00000427191 CCDC32Q9BV29 185 aa14.02□□□□□ -0.16
PTPN13-203ENST00000427191 MS4A12Q9NXJ0 267 aa14.02□□□□□ -0.16
PTPN13-203ENST00000427191 STBD1O95210 358 aa14.02□□□□□ -0.16
PTPN13-203ENST00000427191 POLR2HP52434 150 aaKnown RBP14.02□□□□□ -0.16
PTPN13-203ENST00000427191 CAP1Q01518 475 aa14.02□□□□□ -0.16
PTPN13-203ENST00000427191 ERMP1Q7Z2K6 904 aa14.02□□□□□ -0.16
PTPN13-203ENST00000427191 PURBQ96QR8 312 aaKnown RBP14.02□□□□□ -0.16
PTPN13-203ENST00000427191 URM1Q9BTM9 101 aaKnown RBP14.02□□□□□ -0.16
PTPN13-203ENST00000427191 WRAP53Q9BUR4 548 aaKnown RBP14.02□□□□□ -0.16
PTPN13-203ENST00000427191 DIP2CQ9Y2E4 1556 aa14.02□□□□□ -0.16
PTPN13-203ENST00000427191 PROM1O43490 865 aa14.02□□□□□ -0.16
PTPN13-203ENST00000427191 GABARAPL2P60520 117 aa14.02□□□□□ -0.16
PTPN13-203ENST00000427191 CLEC12AQ5QGZ9 265 aa14.02□□□□□ -0.16
PTPN13-203ENST00000427191 UBE2J2Q8N2K1 259 aa14.02□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms