RNA–Protein interactions for RNA: ENST00000426683.5

HERC3-205, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 3, humanhuman

TSL 4

Gene HERC3, Length 559 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC3-205ENST00000426683 MAP2K7O14733 419 aa17.13■□□□□ 0.33
HERC3-205ENST00000426683 CLGNO14967 610 aa17.13■□□□□ 0.33
HERC3-205ENST00000426683 NDUFS4O43181 175 aa17.13■□□□□ 0.33
HERC3-205ENST00000426683 H2AFYO75367 372 aaKnown RBP17.13■□□□□ 0.33
HERC3-205ENST00000426683 PRB1P04280 392 aa17.13■□□□□ 0.33
HERC3-205ENST00000426683 SERPIND1P05546 499 aa17.13■□□□□ 0.33
HERC3-205ENST00000426683 UMODP07911 640 aa17.13■□□□□ 0.33
HERC3-205ENST00000426683 MTHFD2P13995 350 aa17.13■□□□□ 0.33
HERC3-205ENST00000426683 CXCR2P25025 360 aa17.13■□□□□ 0.33
HERC3-205ENST00000426683 AVPR1BP47901 424 aa17.13■□□□□ 0.33
HERC3-205ENST00000426683 AGTR2P50052 363 aa17.13■□□□□ 0.33
HERC3-205ENST00000426683 OCA2Q04671 838 aa17.13■□□□□ 0.33
HERC3-205ENST00000426683 DSG2Q14126 1118 aa17.13■□□□□ 0.33
HERC3-205ENST00000426683 PDK4Q16654 411 aa17.13■□□□□ 0.33
HERC3-205ENST00000426683 TECRLQ5HYJ1 363 aa17.13■□□□□ 0.33
HERC3-205ENST00000426683 ATG9BQ674R7 924 aa17.13■□□□□ 0.33
HERC3-205ENST00000426683 SHISA6Q6ZSJ9 500 aa17.13■□□□□ 0.33
HERC3-205ENST00000426683 MTBPQ96DY7 904 aa17.13■□□□□ 0.33
HERC3-205ENST00000426683 MOCOSQ96EN8 888 aa17.13■□□□□ 0.33
HERC3-205ENST00000426683 CCDC77Q9BR77 488 aa17.13■□□□□ 0.33
HERC3-205ENST00000426683 YIPF2Q9BWQ6 316 aa17.13■□□□□ 0.33
HERC3-205ENST00000426683 GEMIN8Q9NWZ8 242 aaKnown RBP17.13■□□□□ 0.33
HERC3-205ENST00000426683 ZNF282Q9UDV7 671 aaPredicted RBP17.13■□□□□ 0.33
HERC3-205ENST00000426683 FETUBQ9UGM5 382 aa17.13■□□□□ 0.33
HERC3-205ENST00000426683 NXT1Q9UKK6 140 aaKnown RBP17.13■□□□□ 0.33
HERC3-205ENST00000426683 FER1L5A0AVI2 2057 aa17.12■□□□□ 0.33
HERC3-205ENST00000426683 FFAR3O14843 346 aa17.12■□□□□ 0.33
HERC3-205ENST00000426683 GPR42O15529 346 aa17.12■□□□□ 0.33
HERC3-205ENST00000426683 COL6A2P12110 1019 aa17.12■□□□□ 0.33
HERC3-205ENST00000426683 GFAPP14136 432 aa17.12■□□□□ 0.33
HERC3-205ENST00000426683 IL1RNP18510 177 aa17.12■□□□□ 0.33
HERC3-205ENST00000426683 AHRP35869 848 aa17.12■□□□□ 0.33
HERC3-205ENST00000426683 VSNL1P62760 191 aa17.12■□□□□ 0.33
HERC3-205ENST00000426683 CHAF1BQ13112 559 aa17.12■□□□□ 0.33
HERC3-205ENST00000426683 KCNAB2Q13303 367 aa17.12■□□□□ 0.33
HERC3-205ENST00000426683 PWP1Q13610 501 aa17.12■□□□□ 0.33
HERC3-205ENST00000426683 ATP1A4Q13733 1029 aa17.12■□□□□ 0.33
HERC3-205ENST00000426683 SLBPQ14493 270 aaKnown RBP eCLIP17.12■□□□□ 0.33
HERC3-205ENST00000426683 TSNAXIP1Q2TAA8 658 aa17.12■□□□□ 0.33
HERC3-205ENST00000426683 PRSS41Q7RTY9 318 aa17.12■□□□□ 0.33
HERC3-205ENST00000426683 AMER3Q8N944 861 aa17.12■□□□□ 0.33
HERC3-205ENST00000426683 ANKRD53Q8N9V6 530 aa17.12■□□□□ 0.33
HERC3-205ENST00000426683 OR9A4Q8NGU2 314 aa17.12■□□□□ 0.33
HERC3-205ENST00000426683 STT3BQ8TCJ2 826 aa17.12■□□□□ 0.33
HERC3-205ENST00000426683 UBTD2Q8WUN7 234 aa17.12■□□□□ 0.33
HERC3-205ENST00000426683 MIEF2Q96C03 454 aa17.12■□□□□ 0.33
HERC3-205ENST00000426683 SCYL1Q96KG9 808 aa17.12■□□□□ 0.33
HERC3-205ENST00000426683 ADNPQ9H2P0 1102 aa17.12■□□□□ 0.33
HERC3-205ENST00000426683 PSMC3IPQ9P2W1 217 aaPredicted RBP17.12■□□□□ 0.33
HERC3-205ENST00000426683 TRPC4Q9UBN4 977 aa17.12■□□□□ 0.33
HERC3-205ENST00000426683 NOL12Q9UGY1 213 aaKnown RBP eCLIP17.12■□□□□ 0.33
HERC3-205ENST00000426683 V9GYY5 206 aaPredicted RBP17.12■□□□□ 0.33
HERC3-205ENST00000426683 IQANK1A0A1B0GTG1 560 aa17.11■□□□□ 0.33
HERC3-205ENST00000426683 H0YIG0 161 aa17.11■□□□□ 0.33
HERC3-205ENST00000426683 PRAMEF4O60810 478 aa17.11■□□□□ 0.33
HERC3-205ENST00000426683 RFPL1O75677 317 aa17.11■□□□□ 0.33
HERC3-205ENST00000426683 NSA2O95478 260 aaKnown RBP17.11■□□□□ 0.33
HERC3-205ENST00000426683 RBP1P09455 135 aa17.11■□□□□ 0.33
HERC3-205ENST00000426683 ZGLP1P0C6A0 271 aa17.11■□□□□ 0.33
HERC3-205ENST00000426683 SFTPCP11686 197 aa17.11■□□□□ 0.33
HERC3-205ENST00000426683 EPORP19235 508 aa17.11■□□□□ 0.33
HERC3-205ENST00000426683 MAT1AQ00266 395 aaKnown RBP17.11■□□□□ 0.33
HERC3-205ENST00000426683 RGS1Q08116 209 aa17.11■□□□□ 0.33
HERC3-205ENST00000426683 SETDB1Q15047 1291 aa17.11■□□□□ 0.33
HERC3-205ENST00000426683 PFKFB4Q16877 469 aa17.11■□□□□ 0.33
HERC3-205ENST00000426683 SYT16Q17RD7 645 aa17.11■□□□□ 0.33
HERC3-205ENST00000426683 VWA2Q5GFL6 755 aa17.11■□□□□ 0.33
HERC3-205ENST00000426683 XKR6Q5GH73 641 aa17.11■□□□□ 0.33
HERC3-205ENST00000426683 PRAMEF9Q5VWM5 478 aa17.11■□□□□ 0.33
HERC3-205ENST00000426683 CPZQ66K79 652 aa17.11■□□□□ 0.33
HERC3-205ENST00000426683 TIFABQ6ZNK6 161 aa17.11■□□□□ 0.33
HERC3-205ENST00000426683 PPP1R32Q7Z5V6 425 aa17.11■□□□□ 0.33
HERC3-205ENST00000426683 MRGPREQ86SM8 312 aa17.11■□□□□ 0.33
HERC3-205ENST00000426683 APLFQ8IW19 511 aaPredicted RBP17.11■□□□□ 0.33
HERC3-205ENST00000426683 PRSS58Q8IYP2 241 aa17.11■□□□□ 0.33
HERC3-205ENST00000426683 KRT78Q8N1N4 520 aa17.11■□□□□ 0.33
HERC3-205ENST00000426683 NT5CQ8TCD5 201 aa17.11■□□□□ 0.33
HERC3-205ENST00000426683 TRIM55Q9BYV6 548 aa17.11■□□□□ 0.33
HERC3-205ENST00000426683 EHD1Q9H4M9 534 aa17.11■□□□□ 0.33
HERC3-205ENST00000426683 ANKHQ9HCJ1 492 aa17.11■□□□□ 0.33
HERC3-205ENST00000426683 ACSS2Q9NR19 701 aa17.11■□□□□ 0.33
HERC3-205ENST00000426683 CPSF2Q9P2I0 782 aaKnown RBP17.11■□□□□ 0.33
HERC3-205ENST00000426683 XPR1Q9UBH6 696 aa17.11■□□□□ 0.33
HERC3-205ENST00000426683 OPTCQ9UBM4 332 aa17.11■□□□□ 0.33
HERC3-205ENST00000426683 MAP4K5Q9Y4K4 846 aa17.11■□□□□ 0.33
HERC3-205ENST00000426683 IGLV3-12A0A075B6K2 115 aa17.1■□□□□ 0.33
HERC3-205ENST00000426683 K7EPI3 171 aa17.1■□□□□ 0.33
HERC3-205ENST00000426683 PEX12O00623 359 aa17.1■□□□□ 0.33
HERC3-205ENST00000426683 KLK8O60259 260 aa17.1■□□□□ 0.33
HERC3-205ENST00000426683 DNAJB5O75953 348 aa17.1■□□□□ 0.33
HERC3-205ENST00000426683 SHBGP04278 402 aa17.1■□□□□ 0.33
HERC3-205ENST00000426683 ALDH18A1P54886 795 aaKnown RBP17.1■□□□□ 0.33
HERC3-205ENST00000426683 IRF8Q02556 426 aa17.1■□□□□ 0.33
HERC3-205ENST00000426683 KLC1Q07866 573 aa17.1■□□□□ 0.33
HERC3-205ENST00000426683 CHIT1Q13231 466 aa17.1■□□□□ 0.33
HERC3-205ENST00000426683 DOC2AQ14183 400 aa17.1■□□□□ 0.33
HERC3-205ENST00000426683 TMIGD1Q6UXZ0 262 aa17.1■□□□□ 0.33
HERC3-205ENST00000426683 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP17.1■□□□□ 0.33
HERC3-205ENST00000426683 TRPV3Q8NET8 790 aa17.1■□□□□ 0.33
HERC3-205ENST00000426683 WDR34Q96EX3 536 aa17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms