RNA–Protein interactions for RNA: ENST00000425971.2

HMGB1P32-201, Transcript of high mobility group box 1 pseudogene 32, humanhuman

BASIC

Gene HMGB1P32, Length 565 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P32-201ENST00000425971 FAM171BQ6P995 826 aa5.89□□□□□ -1.47
HMGB1P32-201ENST00000425971 PACS1Q6VY07 963 aa5.89□□□□□ -1.47
HMGB1P32-201ENST00000425971 ZNF517Q6ZMY9 492 aaPredicted RBP5.89□□□□□ -1.47
HMGB1P32-201ENST00000425971 LIN28BQ6ZN17 250 aaKnown RBP eCLIP5.89□□□□□ -1.47
HMGB1P32-201ENST00000425971 ADGRD2Q7Z7M1 963 aa5.89□□□□□ -1.47
HMGB1P32-201ENST00000425971 TMPRSS11BQ86T26 416 aa5.89□□□□□ -1.47
HMGB1P32-201ENST00000425971 MUC20Q8N307 709 aaPredicted RBP5.89□□□□□ -1.47
HMGB1P32-201ENST00000425971 RDM1Q8NG50 284 aa5.89□□□□□ -1.47
HMGB1P32-201ENST00000425971 OCC1Q8TAD7 63 aa5.89□□□□□ -1.47
HMGB1P32-201ENST00000425971 GDAP1Q8TB36 358 aa5.89□□□□□ -1.47
HMGB1P32-201ENST00000425971 SCARB1Q8WTV0 552 aa5.89□□□□□ -1.47
HMGB1P32-201ENST00000425971 KCNE4Q8WWG9 221 aa5.89□□□□□ -1.47
HMGB1P32-201ENST00000425971 SUSD6Q92537 303 aa5.89□□□□□ -1.47
HMGB1P32-201ENST00000425971 RTP4Q96DX8 246 aa5.89□□□□□ -1.47
HMGB1P32-201ENST00000425971 LINGO1Q96FE5 620 aa5.89□□□□□ -1.47
HMGB1P32-201ENST00000425971 VN1R1Q9GZP7 353 aa5.89□□□□□ -1.47
HMGB1P32-201ENST00000425971 MALT1Q9UDY8 824 aa5.89□□□□□ -1.47
HMGB1P32-201ENST00000425971 CPSF3Q9UKF6 684 aaKnown RBP5.89□□□□□ -1.47
HMGB1P32-201ENST00000425971 DYNC1LI1Q9Y6G9 523 aaKnown RBP5.89□□□□□ -1.47
HMGB1P32-201ENST00000425971 IGHV4OR15-8A0A075B7B6 117 aa5.88□□□□□ -1.47
HMGB1P32-201ENST00000425971 PSMA7O14818 248 aa5.88□□□□□ -1.47
HMGB1P32-201ENST00000425971 PPP1R3DO95685 299 aa5.88□□□□□ -1.47
HMGB1P32-201ENST00000425971 IGHV2-70P01814 119 aa5.88□□□□□ -1.47
HMGB1P32-201ENST00000425971 ALPLP05186 524 aa5.88□□□□□ -1.47
HMGB1P32-201ENST00000425971 KRT19P08727 400 aa5.88□□□□□ -1.47
HMGB1P32-201ENST00000425971 SUPT20HL2P0C7V6 817 aa5.88□□□□□ -1.47
HMGB1P32-201ENST00000425971 ACP2P11117 423 aa5.88□□□□□ -1.47
HMGB1P32-201ENST00000425971 PSMA3P25788 255 aa5.88□□□□□ -1.47
HMGB1P32-201ENST00000425971 PTPN3P26045 913 aa5.88□□□□□ -1.47
HMGB1P32-201ENST00000425971 PPP2R1AP30153 589 aa5.88□□□□□ -1.47
HMGB1P32-201ENST00000425971 PRKCIP41743 596 aa5.88□□□□□ -1.47
HMGB1P32-201ENST00000425971 LHX1P48742 406 aa5.88□□□□□ -1.47
HMGB1P32-201ENST00000425971 DSCR9P59020 149 aa5.88□□□□□ -1.47
HMGB1P32-201ENST00000425971 TUBB4BP68371 445 aa5.88□□□□□ -1.47
HMGB1P32-201ENST00000425971 RPL24P83731 157 aaKnown RBP5.88□□□□□ -1.47
HMGB1P32-201ENST00000425971 MFAP5Q13361 173 aa5.88□□□□□ -1.47
HMGB1P32-201ENST00000425971 PTK6Q13882 451 aa5.88□□□□□ -1.47
HMGB1P32-201ENST00000425971 E2F5Q15329 346 aa5.88□□□□□ -1.47
HMGB1P32-201ENST00000425971 CCDC6Q16204 474 aa5.88□□□□□ -1.47
HMGB1P32-201ENST00000425971 MDH1BQ5I0G3 518 aa5.88□□□□□ -1.47
HMGB1P32-201ENST00000425971 STXBP5Q5T5C0 1151 aa5.88□□□□□ -1.47
HMGB1P32-201ENST00000425971 FAM91A1Q658Y4 838 aa5.88□□□□□ -1.47
HMGB1P32-201ENST00000425971 SPATA2LQ8IUW3 424 aaPredicted RBP5.88□□□□□ -1.47
HMGB1P32-201ENST00000425971 C9orf43Q8TAL5 461 aaPredicted RBP5.88□□□□□ -1.47
HMGB1P32-201ENST00000425971 SYN2Q92777 582 aaPredicted RBP5.88□□□□□ -1.47
HMGB1P32-201ENST00000425971 DOCK7Q96N67 2140 aa5.88□□□□□ -1.47
HMGB1P32-201ENST00000425971 MLPHQ9BV36 600 aaPredicted RBP5.88□□□□□ -1.47
HMGB1P32-201ENST00000425971 KATNB1Q9BVA0 655 aa5.88□□□□□ -1.47
HMGB1P32-201ENST00000425971 TM6SF1Q9BZW5 370 aa5.88□□□□□ -1.47
HMGB1P32-201ENST00000425971 ARRDC1-AS1Q9H2J1 176 aa5.88□□□□□ -1.47
HMGB1P32-201ENST00000425971 LRWD1Q9UFC0 647 aa5.88□□□□□ -1.47
HMGB1P32-201ENST00000425971 MROH7-TTC4A0A0A0MT08 1334 aa5.88□□□□□ -1.47
HMGB1P32-201ENST00000425971 SALL1Q9NSC2 1324 aa5.88□□□□□ -1.47
HMGB1P32-201ENST00000425971 C2CD4DB7Z1M9 353 aa5.87□□□□□ -1.47
HMGB1P32-201ENST00000425971 AP5Z1O43299 807 aa5.87□□□□□ -1.47
HMGB1P32-201ENST00000425971 SMAD6O43541 496 aaKnown RBP5.87□□□□□ -1.47
HMGB1P32-201ENST00000425971 KINO60870 393 aaKnown RBP5.87□□□□□ -1.47
HMGB1P32-201ENST00000425971 ACSL3O95573 720 aa5.87□□□□□ -1.47
HMGB1P32-201ENST00000425971 ZBTB11O95625 1053 aaPredicted RBP5.87□□□□□ -1.47
HMGB1P32-201ENST00000425971 CSN3P07498 182 aa5.87□□□□□ -1.47
HMGB1P32-201ENST00000425971 FAM58BPP0C7Q3 252 aa5.87□□□□□ -1.47
HMGB1P32-201ENST00000425971 CTNNB1P35222 781 aa5.87□□□□□ -1.47
HMGB1P32-201ENST00000425971 CDKN2AP42771 156 aaKnown RBP5.87□□□□□ -1.47
HMGB1P32-201ENST00000425971 MAPK12P53778 367 aa5.87□□□□□ -1.47
HMGB1P32-201ENST00000425971 ASIC2Q16515 512 aa5.87□□□□□ -1.47
HMGB1P32-201ENST00000425971 TYSND1Q2T9J0 566 aa5.87□□□□□ -1.47
HMGB1P32-201ENST00000425971 MSANTD1Q6ZTZ1 278 aa5.87□□□□□ -1.47
HMGB1P32-201ENST00000425971 C11orf57Q6ZUT1 292 aaPredicted RBP5.87□□□□□ -1.47
HMGB1P32-201ENST00000425971 PIWIL4Q7Z3Z4 852 aaKnown RBP5.87□□□□□ -1.47
HMGB1P32-201ENST00000425971 RBM23Q86U06 439 aaKnown RBP5.87□□□□□ -1.47
HMGB1P32-201ENST00000425971 LONP2Q86WA8 852 aa5.87□□□□□ -1.47
HMGB1P32-201ENST00000425971 DZIP1Q86YF9 867 aaKnown RBP5.87□□□□□ -1.47
HMGB1P32-201ENST00000425971 TIGD4Q8IY51 512 aa5.87□□□□□ -1.47
HMGB1P32-201ENST00000425971 MYOCDQ8IZQ8 938 aa5.87□□□□□ -1.47
HMGB1P32-201ENST00000425971 CRYBG2Q8N1P7 616 aa5.87□□□□□ -1.47
HMGB1P32-201ENST00000425971 ARHGAP24Q8N264 748 aa5.87□□□□□ -1.47
HMGB1P32-201ENST00000425971 ZNF611Q8N823 705 aa5.87□□□□□ -1.47
HMGB1P32-201ENST00000425971 RNF128Q8TEB7 428 aa5.87□□□□□ -1.47
HMGB1P32-201ENST00000425971 SSMEM1Q8WWF3 244 aa5.87□□□□□ -1.47
HMGB1P32-201ENST00000425971 DHX58Q96C10 678 aa5.87□□□□□ -1.47
HMGB1P32-201ENST00000425971 RTP3Q9BQQ7 232 aa5.87□□□□□ -1.47
HMGB1P32-201ENST00000425971 COPS7BQ9H9Q2 264 aaPredicted RBP5.87□□□□□ -1.47
HMGB1P32-201ENST00000425971 LRRC4Q9HBW1 653 aa5.87□□□□□ -1.47
HMGB1P32-201ENST00000425971 B3GAT1Q9P2W7 334 aa5.87□□□□□ -1.47
HMGB1P32-201ENST00000425971 SNX7Q9UNH6 387 aa5.87□□□□□ -1.47
HMGB1P32-201ENST00000425971 PARP14Q460N5 1801 aa5.87□□□□□ -1.47
HMGB1P32-201ENST00000425971 ASXL3Q9C0F0 2248 aa5.86□□□□□ -1.47
HMGB1P32-201ENST00000425971 CXCL10P02778 98 aa5.86□□□□□ -1.47
HMGB1P32-201ENST00000425971 TCF4P15884 667 aa5.86□□□□□ -1.47
HMGB1P32-201ENST00000425971 CKMT2P17540 419 aa5.86□□□□□ -1.47
HMGB1P32-201ENST00000425971 SLC6A6P31641 620 aa5.86□□□□□ -1.47
HMGB1P32-201ENST00000425971 TCF7P36402 384 aaPredicted RBP5.86□□□□□ -1.47
HMGB1P32-201ENST00000425971 FUT6P51993 359 aa5.86□□□□□ -1.47
HMGB1P32-201ENST00000425971 THOP1P52888 689 aa5.86□□□□□ -1.47
HMGB1P32-201ENST00000425971 NANOS2P60321 138 aaKnown RBP5.86□□□□□ -1.47
HMGB1P32-201ENST00000425971 CUL3Q13618 768 aa5.86□□□□□ -1.47
HMGB1P32-201ENST00000425971 DUOXA1Q1HG43 343 aa5.86□□□□□ -1.47
HMGB1P32-201ENST00000425971 KIF19Q2TAC6 998 aa5.86□□□□□ -1.47
HMGB1P32-201ENST00000425971 SYT14P1Q58G82 188 aa5.86□□□□□ -1.47
HMGB1P32-201ENST00000425971 C9orf57Q5W0N0 161 aa5.86□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 72.8 ms