RNA–Protein interactions for RNA: ENST00000425072.5

MDC1-205, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 3

Gene MDC1, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-205ENST00000425072 FNDC5Q8NAU1 212 aa9.9□□□□□ -0.82
MDC1-205ENST00000425072 WDR48Q8TAF3 677 aa9.9□□□□□ -0.82
MDC1-205ENST00000425072 BAHD1Q8TBE0 780 aaPredicted RBP9.9□□□□□ -0.82
MDC1-205ENST00000425072 RERGQ96A58 199 aaPredicted RBP9.9□□□□□ -0.82
MDC1-205ENST00000425072 RGMAQ96B86 450 aa9.9□□□□□ -0.82
MDC1-205ENST00000425072 NLNQ9BYT8 704 aa9.9□□□□□ -0.82
MDC1-205ENST00000425072 LRTM1Q9HBL6 345 aa9.9□□□□□ -0.82
MDC1-205ENST00000425072 TMEM9BQ9NQ34 198 aa9.9□□□□□ -0.82
MDC1-205ENST00000425072 SAR1AQ9NR31 198 aa9.9□□□□□ -0.82
MDC1-205ENST00000425072 FARSBQ9NSD9 589 aaKnown RBP9.9□□□□□ -0.82
MDC1-205ENST00000425072 NOP53Q9NZM5 478 aaKnown RBP9.9□□□□□ -0.82
MDC1-205ENST00000425072 SLC12A4Q9UP95 1085 aa9.9□□□□□ -0.82
MDC1-205ENST00000425072 SH2B3Q9UQQ2 575 aa9.9□□□□□ -0.82
MDC1-205ENST00000425072 RUVBL1Q9Y265 456 aaKnown RBP9.9□□□□□ -0.82
MDC1-205ENST00000425072 WBP11Q9Y2W2 641 aaKnown RBP9.9□□□□□ -0.82
MDC1-205ENST00000425072 CCL27Q9Y4X3 112 aa9.9□□□□□ -0.82
MDC1-205ENST00000425072 DNAH14Q0VDD8 3507 aa9.9□□□□□ -0.83
MDC1-205ENST00000425072 MDC1Q14676 2089 aaKnown RBP9.89□□□□□ -0.83
MDC1-205ENST00000425072 NCOR2Q9Y618 2525 aa9.89□□□□□ -0.83
MDC1-205ENST00000425072 PCDH15Q96QU1 1955 aa9.89□□□□□ -0.83
MDC1-205ENST00000425072 IGKV1-8A0A0C4DH67 115 aa9.89□□□□□ -0.83
MDC1-205ENST00000425072 FEZF1A0PJY2 475 aa9.89□□□□□ -0.83
MDC1-205ENST00000425072 LNP1A1A4G5 178 aa9.89□□□□□ -0.83
MDC1-205ENST00000425072 OR2A25A4D2G3 310 aa9.89□□□□□ -0.83
MDC1-205ENST00000425072 TLCD2A6NGC4 264 aa9.89□□□□□ -0.83
MDC1-205ENST00000425072 E9PBE3 544 aa9.89□□□□□ -0.83
MDC1-205ENST00000425072 FCHO1O14526 889 aa9.89□□□□□ -0.83
MDC1-205ENST00000425072 LSM1O15116 133 aaKnown RBP9.89□□□□□ -0.83
MDC1-205ENST00000425072 GFRA3O60609 400 aa9.89□□□□□ -0.83
MDC1-205ENST00000425072 KLHL41O60662 606 aa9.89□□□□□ -0.83
MDC1-205ENST00000425072 ZBTB11O95625 1053 aaPredicted RBP9.89□□□□□ -0.83
MDC1-205ENST00000425072 TGFB1P01137 390 aa9.89□□□□□ -0.83
MDC1-205ENST00000425072 THRAP10827 490 aa9.89□□□□□ -0.83
MDC1-205ENST00000425072 ACPPP15309 386 aa9.89□□□□□ -0.83
MDC1-205ENST00000425072 MAGP20916 626 aa9.89□□□□□ -0.83
MDC1-205ENST00000425072 CD1CP29017 333 aa9.89□□□□□ -0.83
MDC1-205ENST00000425072 ARL4DP49703 201 aa9.89□□□□□ -0.83
MDC1-205ENST00000425072 HTR6P50406 440 aa9.89□□□□□ -0.83
MDC1-205ENST00000425072 STXBP1P61764 594 aaKnown RBP9.89□□□□□ -0.83
MDC1-205ENST00000425072 RPS13P62277 151 aaKnown RBP9.89□□□□□ -0.83
MDC1-205ENST00000425072 YBX1P67809 324 aaKnown RBP9.89□□□□□ -0.83
MDC1-205ENST00000425072 RGS1Q08116 209 aa9.89□□□□□ -0.83
MDC1-205ENST00000425072 SPEM2Q0P670 501 aa9.89□□□□□ -0.83
MDC1-205ENST00000425072 TUBB3Q13509 450 aa9.89□□□□□ -0.83
MDC1-205ENST00000425072 KRT72Q14CN4 511 aa9.89□□□□□ -0.83
MDC1-205ENST00000425072 ZSCAN26Q16670 478 aa9.89□□□□□ -0.83
MDC1-205ENST00000425072 PROX2Q3B8N5 592 aa9.89□□□□□ -0.83
MDC1-205ENST00000425072 AMZ1Q400G9 498 aa9.89□□□□□ -0.83
MDC1-205ENST00000425072 RFTN2Q52LD8 501 aaPredicted RBP9.89□□□□□ -0.83
MDC1-205ENST00000425072 TCHHL1Q5QJ38 904 aaPredicted RBP9.89□□□□□ -0.83
MDC1-205ENST00000425072 FCRL6Q6DN72 434 aa9.89□□□□□ -0.83
MDC1-205ENST00000425072 TMEM71Q6P5X7 295 aa9.89□□□□□ -0.83
MDC1-205ENST00000425072 CCDC121Q6ZUS5 278 aa9.89□□□□□ -0.83
MDC1-205ENST00000425072 PAGE2Q7Z2X7 111 aa9.89□□□□□ -0.83
MDC1-205ENST00000425072 KMT5CQ86Y97 462 aa9.89□□□□□ -0.83
MDC1-205ENST00000425072 MIER2Q8N344 545 aa9.89□□□□□ -0.83
MDC1-205ENST00000425072 FITM2Q8N6M3 262 aa9.89□□□□□ -0.83
MDC1-205ENST00000425072 Q8N9G6 341 aaPredicted RBP9.89□□□□□ -0.83
MDC1-205ENST00000425072 CAMKVQ8NCB2 501 aa9.89□□□□□ -0.83
MDC1-205ENST00000425072 ZNF740Q8NDX6 193 aa9.89□□□□□ -0.83
MDC1-205ENST00000425072 PRSS33Q8NF86 280 aa9.89□□□□□ -0.83
MDC1-205ENST00000425072 CHTF18Q8WVB6 975 aa9.89□□□□□ -0.83
MDC1-205ENST00000425072 SLC13A3Q8WWT9 602 aa9.89□□□□□ -0.83
MDC1-205ENST00000425072 SLC39A7Q92504 469 aa9.89□□□□□ -0.83
MDC1-205ENST00000425072 RSC1A1Q92681 617 aa9.89□□□□□ -0.83
MDC1-205ENST00000425072 CCDC74AQ96AQ1 378 aa9.89□□□□□ -0.83
MDC1-205ENST00000425072 CMTM5Q96DZ9 223 aa9.89□□□□□ -0.83
MDC1-205ENST00000425072 TRAPPC9Q96Q05 1148 aa9.89□□□□□ -0.83
MDC1-205ENST00000425072 CDC6Q99741 560 aa9.89□□□□□ -0.83
MDC1-205ENST00000425072 ZFYVE21Q9BQ24 234 aa9.89□□□□□ -0.83
MDC1-205ENST00000425072 MYLK2Q9H1R3 596 aa9.89□□□□□ -0.83
MDC1-205ENST00000425072 SMOC1Q9H4F8 434 aa9.89□□□□□ -0.83
MDC1-205ENST00000425072 PDE7BQ9NP56 450 aa9.89□□□□□ -0.83
MDC1-205ENST00000425072 SLC6A20Q9NP91 592 aa9.89□□□□□ -0.83
MDC1-205ENST00000425072 DMRT3Q9NQL9 472 aa9.89□□□□□ -0.83
MDC1-205ENST00000425072 SEMA4GQ9NTN9 838 aa9.89□□□□□ -0.83
MDC1-205ENST00000425072 SIRT5Q9NXA8 310 aa9.89□□□□□ -0.83
MDC1-205ENST00000425072 ASIC5Q9NY37 505 aa9.89□□□□□ -0.83
MDC1-205ENST00000425072 PCDHGA4Q9Y5G9 962 aa9.89□□□□□ -0.83
MDC1-205ENST00000425072 SNRNP200O75643 2136 aaKnown RBP9.88□□□□□ -0.83
MDC1-205ENST00000425072 LRIT2A6NDA9 550 aa9.88□□□□□ -0.83
MDC1-205ENST00000425072 SLC9B1P1A6NJY1 282 aa9.88□□□□□ -0.83
MDC1-205ENST00000425072 PSMD12O00232 456 aaPredicted RBP9.88□□□□□ -0.83
MDC1-205ENST00000425072 ZSCAN9O15535 394 aaPredicted RBP9.88□□□□□ -0.83
MDC1-205ENST00000425072 RASSF9O75901 435 aa9.88□□□□□ -0.83
MDC1-205ENST00000425072 KIAA0754O94854 1291 aa9.88□□□□□ -0.83
MDC1-205ENST00000425072 SEMA3DO95025 777 aa9.88□□□□□ -0.83
MDC1-205ENST00000425072 CPNE6O95741 557 aa9.88□□□□□ -0.83
MDC1-205ENST00000425072 C9P02748 559 aa9.88□□□□□ -0.83
MDC1-205ENST00000425072 SERPIND1P05546 499 aa9.88□□□□□ -0.83
MDC1-205ENST00000425072 GP1BAP07359 652 aa9.88□□□□□ -0.83
MDC1-205ENST00000425072 SLC35G6P0C7Q6 338 aa9.88□□□□□ -0.83
MDC1-205ENST00000425072 TSFMP43897 325 aaKnown RBP9.88□□□□□ -0.83
MDC1-205ENST00000425072 MRPL19P49406 292 aaKnown RBP9.88□□□□□ -0.83
MDC1-205ENST00000425072 ACADVLP49748 655 aa9.88□□□□□ -0.83
MDC1-205ENST00000425072 RASSF2P50749 326 aa9.88□□□□□ -0.83
MDC1-205ENST00000425072 HSD11B2P80365 405 aa9.88□□□□□ -0.83
MDC1-205ENST00000425072 E2F1Q01094 437 aa9.88□□□□□ -0.83
MDC1-205ENST00000425072 HMGCS1Q01581 520 aa9.88□□□□□ -0.83
MDC1-205ENST00000425072 SQLEQ14534 574 aa9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms