RNA–Protein interactions for RNA: ENST00000424804.6

VRK3-203, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 1,061 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-203ENST00000424804 TCRBV9S1A1TA0A576 114 aa12.3□□□□□ -0.44
VRK3-203ENST00000424804 CXorf49A8MYA2 514 aaPredicted RBP12.3□□□□□ -0.44
VRK3-203ENST00000424804 E7ENX8 843 aa12.3□□□□□ -0.44
VRK3-203ENST00000424804 EIF3FO00303 357 aaPredicted RBP12.3□□□□□ -0.44
VRK3-203ENST00000424804 LRRTM2O43300 516 aa12.3□□□□□ -0.44
VRK3-203ENST00000424804 GUCA1CO95843 209 aa12.3□□□□□ -0.44
VRK3-203ENST00000424804 C8GP07360 202 aa12.3□□□□□ -0.44
VRK3-203ENST00000424804 STSP08842 583 aa12.3□□□□□ -0.44
VRK3-203ENST00000424804 ACPPP15309 386 aa12.3□□□□□ -0.44
VRK3-203ENST00000424804 IMPA1P29218 277 aa12.3□□□□□ -0.44
VRK3-203ENST00000424804 HSD17B2P37059 387 aa12.3□□□□□ -0.44
VRK3-203ENST00000424804 TAP2Q03519 686 aa12.3□□□□□ -0.44
VRK3-203ENST00000424804 RELAQ04206 551 aa12.3□□□□□ -0.44
VRK3-203ENST00000424804 PRDX1Q06830 199 aaKnown RBP12.3□□□□□ -0.44
VRK3-203ENST00000424804 DSG2Q14126 1118 aa12.3□□□□□ -0.44
VRK3-203ENST00000424804 ARHGAP19Q14CB8 494 aa12.3□□□□□ -0.44
VRK3-203ENST00000424804 PCOLCEQ15113 449 aa12.3□□□□□ -0.44
VRK3-203ENST00000424804 TLR1Q15399 786 aa12.3□□□□□ -0.44
VRK3-203ENST00000424804 SYT16Q17RD7 645 aa12.3□□□□□ -0.44
VRK3-203ENST00000424804 MUM1Q2TAK8 710 aa12.3□□□□□ -0.44
VRK3-203ENST00000424804 TMEM205Q6UW68 189 aa12.3□□□□□ -0.44
VRK3-203ENST00000424804 NDUFAF7Q7L592 441 aa12.3□□□□□ -0.44
VRK3-203ENST00000424804 MMGT1Q8N4V1 131 aa12.3□□□□□ -0.44
VRK3-203ENST00000424804 PPM1NQ8N819 430 aa12.3□□□□□ -0.44
VRK3-203ENST00000424804 FBXO15Q8NCQ5 510 aaPredicted RBP12.3□□□□□ -0.44
VRK3-203ENST00000424804 HAS2Q92819 552 aa12.3□□□□□ -0.44
VRK3-203ENST00000424804 VPS39Q96JC1 886 aa12.3□□□□□ -0.44
VRK3-203ENST00000424804 TRIM54Q9BYV2 358 aa12.3□□□□□ -0.44
VRK3-203ENST00000424804 UNKQ9C0B0 810 aaKnown RBP12.3□□□□□ -0.44
VRK3-203ENST00000424804 ATG10Q9H0Y0 220 aa12.3□□□□□ -0.44
VRK3-203ENST00000424804 CAB39LQ9H9S4 337 aa12.3□□□□□ -0.44
VRK3-203ENST00000424804 CCDC177Q9NQR7 707 aaPredicted RBP12.3□□□□□ -0.44
VRK3-203ENST00000424804 UTP6Q9NYH9 597 aaKnown RBP12.3□□□□□ -0.44
VRK3-203ENST00000424804 MTRF1LQ9UGC7 380 aaKnown RBP12.3□□□□□ -0.44
VRK3-203ENST00000424804 PDE10AQ9Y233 779 aa12.3□□□□□ -0.44
VRK3-203ENST00000424804 OSGIN2Q9Y236 505 aa12.3□□□□□ -0.44
VRK3-203ENST00000424804 MTO1Q9Y2Z2 717 aaKnown RBP12.3□□□□□ -0.44
VRK3-203ENST00000424804 PDZD2O15018 2839 aa12.29□□□□□ -0.44
VRK3-203ENST00000424804 AKAP9Q99996 3911 aa12.29□□□□□ -0.44
VRK3-203ENST00000424804 NPEPPSL1A6NEC2 478 aa12.29□□□□□ -0.44
VRK3-203ENST00000424804 IDSB3KWA1 339 aa12.29□□□□□ -0.44
VRK3-203ENST00000424804 GFYI3L273 518 aa12.29□□□□□ -0.44
VRK3-203ENST00000424804 CCNDBP1O95273 360 aa12.29□□□□□ -0.44
VRK3-203ENST00000424804 SERPINA7P05543 415 aa12.29□□□□□ -0.44
VRK3-203ENST00000424804 PRF1P14222 555 aa12.29□□□□□ -0.44
VRK3-203ENST00000424804 FBLP22087 321 aaKnown RBP12.29□□□□□ -0.44
VRK3-203ENST00000424804 TNFSF10P50591 281 aa12.29□□□□□ -0.44
VRK3-203ENST00000424804 EMP2P54851 167 aa12.29□□□□□ -0.44
VRK3-203ENST00000424804 TAS2R39P59534 338 aa12.29□□□□□ -0.44
VRK3-203ENST00000424804 GPX6P59796 221 aa12.29□□□□□ -0.44
VRK3-203ENST00000424804 TBPL1P62380 186 aa12.29□□□□□ -0.44
VRK3-203ENST00000424804 OCA2Q04671 838 aa12.29□□□□□ -0.44
VRK3-203ENST00000424804 CDC16Q13042 620 aa12.29□□□□□ -0.44
VRK3-203ENST00000424804 EFTUD2Q15029 972 aaKnown RBP eCLIP12.29□□□□□ -0.443e-6■■□□□ 13.2
VRK3-203ENST00000424804 ZRSR2Q15696 482 aaKnown RBP12.29□□□□□ -0.44
VRK3-203ENST00000424804 UAP1Q16222 522 aaPredicted RBP12.29□□□□□ -0.44
VRK3-203ENST00000424804 PHKG1Q16816 387 aa12.29□□□□□ -0.44
VRK3-203ENST00000424804 ICE2Q659A1 982 aa12.29□□□□□ -0.44
VRK3-203ENST00000424804 ZC3H7AQ8IWR0 971 aaKnown RBP12.29□□□□□ -0.44
VRK3-203ENST00000424804 KBTBD2Q8IY47 623 aa12.29□□□□□ -0.44
VRK3-203ENST00000424804 CEP112Q8N8E3 955 aa12.29□□□□□ -0.44
VRK3-203ENST00000424804 OR1N1Q8NGS0 311 aa12.29□□□□□ -0.44
VRK3-203ENST00000424804 BRIX1Q8TDN6 353 aaKnown RBP12.29□□□□□ -0.44
VRK3-203ENST00000424804 FBF1Q8TES7 1133 aa12.29□□□□□ -0.44
VRK3-203ENST00000424804 MVB12AQ96EY5 273 aa12.29□□□□□ -0.44
VRK3-203ENST00000424804 CNDP1Q96KN2 507 aa12.29□□□□□ -0.44
VRK3-203ENST00000424804 IMMP1LQ96LU5 166 aa12.29□□□□□ -0.44
VRK3-203ENST00000424804 CCDC138Q96M89 665 aa12.29□□□□□ -0.44
VRK3-203ENST00000424804 RHOJQ9H4E5 214 aa12.29□□□□□ -0.44
VRK3-203ENST00000424804 EPS8L2Q9H6S3 715 aa12.29□□□□□ -0.44
VRK3-203ENST00000424804 PARVBQ9HBI1 364 aa12.29□□□□□ -0.44
VRK3-203ENST00000424804 GPAMQ9HCL2 828 aa12.29□□□□□ -0.44
VRK3-203ENST00000424804 ARL15Q9NXU5 204 aa12.29□□□□□ -0.44
VRK3-203ENST00000424804 DMGDHQ9UI17 866 aaKnown RBP12.29□□□□□ -0.44
VRK3-203ENST00000424804 MAP2K7O14733 419 aa12.28□□□□□ -0.44
VRK3-203ENST00000424804 PCDH17O14917 1159 aa12.28□□□□□ -0.44
VRK3-203ENST00000424804 HAT1O14929 419 aa12.28□□□□□ -0.44
VRK3-203ENST00000424804 SLC16A5O15375 505 aa12.28□□□□□ -0.44
VRK3-203ENST00000424804 PHGDHO43175 533 aaKnown RBP12.28□□□□□ -0.44
VRK3-203ENST00000424804 FAM155BO75949 473 aa12.28□□□□□ -0.44
VRK3-203ENST00000424804 ITGAMP11215 1152 aa12.28□□□□□ -0.44
VRK3-203ENST00000424804 STX2P32856 288 aa12.28□□□□□ -0.44
VRK3-203ENST00000424804 SP140Q13342 867 aa12.28□□□□□ -0.44
VRK3-203ENST00000424804 NAE1Q13564 534 aa12.28□□□□□ -0.44
VRK3-203ENST00000424804 ELOAQ14241 798 aaKnown RBP12.28□□□□□ -0.44
VRK3-203ENST00000424804 USP10Q14694 798 aaKnown RBP12.28□□□□□ -0.44
VRK3-203ENST00000424804 SLMAPQ14BN4 828 aa12.28□□□□□ -0.44
VRK3-203ENST00000424804 KBTBD12Q3ZCT8 623 aa12.28□□□□□ -0.44
VRK3-203ENST00000424804 GARNL3Q5VVW2 1013 aa12.28□□□□□ -0.44
VRK3-203ENST00000424804 AGTRAPQ6RW13 159 aa12.28□□□□□ -0.44
VRK3-203ENST00000424804 TMEM207Q6UWW9 146 aa12.28□□□□□ -0.44
VRK3-203ENST00000424804 FRA10AC1Q70Z53 315 aa12.28□□□□□ -0.44
VRK3-203ENST00000424804 VN1R4Q7Z5H5 301 aa12.28□□□□□ -0.44
VRK3-203ENST00000424804 PLD3Q8IV08 490 aa12.28□□□□□ -0.44
VRK3-203ENST00000424804 CEP97Q8IW35 865 aa12.28□□□□□ -0.44
VRK3-203ENST00000424804 SPATA6LQ8N4H0 392 aa12.28□□□□□ -0.44
VRK3-203ENST00000424804 NKAPQ8N5F7 415 aaKnown RBP12.28□□□□□ -0.44
VRK3-203ENST00000424804 SIRT6Q8N6T7 355 aa12.28□□□□□ -0.44
VRK3-203ENST00000424804 CSNK1A1LQ8N752 337 aa12.28□□□□□ -0.44
VRK3-203ENST00000424804 RELTQ969Z4 430 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms