RNA–Protein interactions for RNA: ENST00000423635.5

CHCHD3-202, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

TSL 1 (best)

Gene CHCHD3, Length 1,310 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-202ENST00000423635 PLD3Q8IV08 490 aa15.71■□□□□ 0.11
CHCHD3-202ENST00000423635 CNGA4Q8IV77 575 aa15.71■□□□□ 0.11
CHCHD3-202ENST00000423635 TP63Q9H3D4 680 aaPredicted RBP15.71■□□□□ 0.11
CHCHD3-202ENST00000423635 GSX1Q9H4S2 264 aaPredicted RBP15.71■□□□□ 0.11
CHCHD3-202ENST00000423635 CHRAC1Q9NRG0 131 aa15.71■□□□□ 0.11
CHCHD3-202ENST00000423635 FAM114A2Q9NRY5 505 aa15.71■□□□□ 0.11
CHCHD3-202ENST00000423635 PLSCR2Q9NRY7 297 aa15.71■□□□□ 0.11
CHCHD3-202ENST00000423635 RPH3AQ9Y2J0 694 aaPredicted RBP15.71■□□□□ 0.11
CHCHD3-202ENST00000423635 FAM90A27PA6NNH2 459 aa15.7■□□□□ 0.1
CHCHD3-202ENST00000423635 MAGEB17A8MXT2 336 aa15.7■□□□□ 0.1
CHCHD3-202ENST00000423635 KLK8O60259 260 aa15.7■□□□□ 0.1
CHCHD3-202ENST00000423635 KIF5CO60282 957 aa15.7■□□□□ 0.1
CHCHD3-202ENST00000423635 DRD2P14416 443 aa15.7■□□□□ 0.1
CHCHD3-202ENST00000423635 TFEBP19484 476 aa15.7■□□□□ 0.1
CHCHD3-202ENST00000423635 TPP2P29144 1249 aaPredicted RBP15.7■□□□□ 0.1
CHCHD3-202ENST00000423635 STIP1P31948 543 aaKnown RBP15.7■□□□□ 0.1
CHCHD3-202ENST00000423635 FDFT1P37268 417 aa15.7■□□□□ 0.1
CHCHD3-202ENST00000423635 TSTA3Q13630 321 aaPredicted RBP15.7■□□□□ 0.1
CHCHD3-202ENST00000423635 PCID2Q5JVF3 399 aa15.7■□□□□ 0.1
CHCHD3-202ENST00000423635 VN1R4Q7Z5H5 301 aa15.7■□□□□ 0.1
CHCHD3-202ENST00000423635 LRRC56Q8IYG6 542 aaPredicted RBP15.7■□□□□ 0.1
CHCHD3-202ENST00000423635 ZNF480Q8WV37 535 aa15.7■□□□□ 0.1
CHCHD3-202ENST00000423635 TREX1Q9NSU2 369 aa15.7■□□□□ 0.1
CHCHD3-202ENST00000423635 HCN3Q9P1Z3 774 aa15.7■□□□□ 0.1
CHCHD3-202ENST00000423635 FBN3Q75N90 2809 aa15.7■□□□□ 0.1
CHCHD3-202ENST00000423635 USP27XA6NNY8 438 aa15.69■□□□□ 0.1
CHCHD3-202ENST00000423635 AKR1B15C9JRZ8 316 aaPredicted RBP15.69■□□□□ 0.1
CHCHD3-202ENST00000423635 KLRC4-KLRK1H3BQV0 150 aa15.69■□□□□ 0.1
CHCHD3-202ENST00000423635 H7BY64 318 aa15.69■□□□□ 0.1
CHCHD3-202ENST00000423635 SGK494L7N484 410 aa15.69■□□□□ 0.1
CHCHD3-202ENST00000423635 TFECO14948 347 aaPredicted RBP15.69■□□□□ 0.1
CHCHD3-202ENST00000423635 ZWINTO95229 277 aa15.69■□□□□ 0.1
CHCHD3-202ENST00000423635 SLC16A8O95907 504 aa15.69■□□□□ 0.1
CHCHD3-202ENST00000423635 IL1RNP18510 177 aa15.69■□□□□ 0.1
CHCHD3-202ENST00000423635 HRH2P25021 359 aa15.69■□□□□ 0.1
CHCHD3-202ENST00000423635 HLCSP50747 726 aa15.69■□□□□ 0.1
CHCHD3-202ENST00000423635 EIF3BP55884 814 aaKnown RBP15.69■□□□□ 0.1
CHCHD3-202ENST00000423635 MLF1P58340 268 aa15.69■□□□□ 0.1
CHCHD3-202ENST00000423635 MPP1Q00013 466 aa15.69■□□□□ 0.1
CHCHD3-202ENST00000423635 FOXD4Q12950 439 aaPredicted RBP15.69■□□□□ 0.1
CHCHD3-202ENST00000423635 ABRAXAS2Q15018 415 aa15.69■□□□□ 0.1
CHCHD3-202ENST00000423635 CMPK2Q5EBM0 449 aa15.69■□□□□ 0.1
CHCHD3-202ENST00000423635 ADCK2Q7Z695 626 aa15.69■□□□□ 0.1
CHCHD3-202ENST00000423635 SULF2Q8IWU5 870 aa15.69■□□□□ 0.1
CHCHD3-202ENST00000423635 CLYBLQ8N0X4 340 aa15.69■□□□□ 0.1
CHCHD3-202ENST00000423635 ARMC10Q8N2F6 343 aa15.69■□□□□ 0.1
CHCHD3-202ENST00000423635 FBXO15Q8NCQ5 510 aaPredicted RBP15.69■□□□□ 0.1
CHCHD3-202ENST00000423635 PPFIBP2Q8ND30 876 aa15.69■□□□□ 0.1
CHCHD3-202ENST00000423635 PPHLN1Q8NEY8 458 aaKnown RBP15.69■□□□□ 0.1
CHCHD3-202ENST00000423635 TMEM125Q96AQ2 219 aa15.69■□□□□ 0.1
CHCHD3-202ENST00000423635 TM4SF19Q96DZ7 209 aa15.69■□□□□ 0.1
CHCHD3-202ENST00000423635 THAP11Q96EK4 314 aa15.69■□□□□ 0.1
CHCHD3-202ENST00000423635 PRAP1Q96NZ9 151 aa15.69■□□□□ 0.1
CHCHD3-202ENST00000423635 OR1F2PQ96R84 312 aa15.69■□□□□ 0.1
CHCHD3-202ENST00000423635 LANCL2Q9NS86 450 aa15.69■□□□□ 0.1
CHCHD3-202ENST00000423635 TMEM184CQ9NVA4 438 aa15.69■□□□□ 0.1
CHCHD3-202ENST00000423635 KLF13Q9Y2Y9 288 aaPredicted RBP15.69■□□□□ 0.1
CHCHD3-202ENST00000423635 TMEM200CA6NKL6 621 aa15.68■□□□□ 0.1
CHCHD3-202ENST00000423635 H3BMM5 538 aa15.68■□□□□ 0.1
CHCHD3-202ENST00000423635 SMAPO00193 183 aa15.68■□□□□ 0.1
CHCHD3-202ENST00000423635 PRMT3O60678 531 aa15.68■□□□□ 0.1
CHCHD3-202ENST00000423635 CTAG2O75638 210 aa15.68■□□□□ 0.1
CHCHD3-202ENST00000423635 CATP04040 527 aaKnown RBP15.68■□□□□ 0.1
CHCHD3-202ENST00000423635 FMO4P31512 558 aa15.68■□□□□ 0.1
CHCHD3-202ENST00000423635 MEOX1P50221 254 aa15.68■□□□□ 0.1
CHCHD3-202ENST00000423635 ADARP55265 1226 aaKnown RBP15.68■□□□□ 0.1
CHCHD3-202ENST00000423635 OR4D2P58180 307 aa15.68■□□□□ 0.1
CHCHD3-202ENST00000423635 RPS15AP62244 130 aaKnown RBP15.68■□□□□ 0.1
CHCHD3-202ENST00000423635 MYBPHQ13203 477 aa15.68■□□□□ 0.1
CHCHD3-202ENST00000423635 KLHL38Q2WGJ6 581 aa15.68■□□□□ 0.1
CHCHD3-202ENST00000423635 ACSBG2Q5FVE4 666 aa15.68■□□□□ 0.1
CHCHD3-202ENST00000423635 EMC4Q5J8M3 183 aa15.68■□□□□ 0.1
CHCHD3-202ENST00000423635 ARHGAP11AQ6P4F7 1023 aa15.68■□□□□ 0.1
CHCHD3-202ENST00000423635 ACAD11Q709F0 780 aa15.68■□□□□ 0.1
CHCHD3-202ENST00000423635 PDSS2Q86YH6 399 aa15.68■□□□□ 0.1
CHCHD3-202ENST00000423635 CCDC71Q8IV32 467 aaPredicted RBP15.68■□□□□ 0.1
CHCHD3-202ENST00000423635 RPRMLQ8N4K4 120 aa15.68■□□□□ 0.1
CHCHD3-202ENST00000423635 ANKHQ9HCJ1 492 aa15.68■□□□□ 0.1
CHCHD3-202ENST00000423635 DNAJB12Q9NXW2 375 aaKnown RBP15.68■□□□□ 0.1
CHCHD3-202ENST00000423635 ST6GALNAC2Q9UJ37 374 aa15.68■□□□□ 0.1
CHCHD3-202ENST00000423635 HS6ST1O60243 411 aa15.68■□□□□ 0.1
CHCHD3-202ENST00000423635 NIPSNAP2O75323 286 aa15.68■□□□□ 0.1
CHCHD3-202ENST00000423635 STATHP02808 62 aa15.68■□□□□ 0.1
CHCHD3-202ENST00000423635 ITGA8P53708 1063 aa15.68■□□□□ 0.1
CHCHD3-202ENST00000423635 PMPCAQ10713 525 aa15.68■□□□□ 0.1
CHCHD3-202ENST00000423635 TBX2Q13207 712 aaPredicted RBP15.68■□□□□ 0.1
CHCHD3-202ENST00000423635 CCDC170Q8IYT3 715 aa15.68■□□□□ 0.1
CHCHD3-202ENST00000423635 KIF2BQ8N4N8 673 aa15.68■□□□□ 0.1
CHCHD3-202ENST00000423635 ZFP62Q8NB50 900 aaPredicted RBP15.68■□□□□ 0.1
CHCHD3-202ENST00000423635 CAMKVQ8NCB2 501 aa15.68■□□□□ 0.1
CHCHD3-202ENST00000423635 LPGAT1Q92604 370 aa15.68■□□□□ 0.1
CHCHD3-202ENST00000423635 TSLPQ969D9 159 aa15.68■□□□□ 0.1
CHCHD3-202ENST00000423635 SEC16BQ96JE7 1060 aa15.68■□□□□ 0.1
CHCHD3-202ENST00000423635 PANX2Q96RD6 677 aa15.68■□□□□ 0.1
CHCHD3-202ENST00000423635 MACROD1Q9BQ69 325 aa15.68■□□□□ 0.1
CHCHD3-202ENST00000423635 ZNF358Q9NW07 568 aa15.68■□□□□ 0.1
CHCHD3-202ENST00000423635 GALPQ9UBC7 116 aa15.68■□□□□ 0.1
CHCHD3-202ENST00000423635 TSR3Q9UJK0 312 aaKnown RBP15.68■□□□□ 0.1
CHCHD3-202ENST00000423635 SLC22A7Q9Y694 548 aa15.68■□□□□ 0.1
CHCHD3-202ENST00000423635 SCN3AQ9NY46 2000 aa15.67■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms