RNA–Protein interactions for RNA: ENST00000418518.2

LINCMD1-201, Transcript of long intergenic non-protein coding RNA, muscle differentiation 1, humanhuman

TSL 5 BASIC

Gene LINCMD1, Length 462 nt, Biotype lincRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINCMD1-201ENST00000418518 ZBTB49Q6ZSB9 765 aa8.69□□□□□ -1.02
LINCMD1-201ENST00000418518 ZNF551Q7Z340 670 aaPredicted RBP8.69□□□□□ -1.02
LINCMD1-201ENST00000418518 SLC9B2Q86UD5 537 aa8.69□□□□□ -1.02
LINCMD1-201ENST00000418518 CARM1Q86X55 608 aa8.69□□□□□ -1.02
LINCMD1-201ENST00000418518 ZZZ3Q8IYH5 903 aa8.69□□□□□ -1.02
LINCMD1-201ENST00000418518 EID3Q8N140 333 aa8.69□□□□□ -1.02
LINCMD1-201ENST00000418518 PIAS4Q8N2W9 510 aaPredicted RBP8.69□□□□□ -1.02
LINCMD1-201ENST00000418518 C10orf111Q8N326 155 aa8.69□□□□□ -1.02
LINCMD1-201ENST00000418518 SLC44A3Q8N4M1 653 aa8.69□□□□□ -1.02
LINCMD1-201ENST00000418518 LMNTD1Q8N9Z9 388 aa8.69□□□□□ -1.02
LINCMD1-201ENST00000418518 LINC01555Q8NAE3 123 aa8.69□□□□□ -1.02
LINCMD1-201ENST00000418518 ZNF740Q8NDX6 193 aa8.69□□□□□ -1.02
LINCMD1-201ENST00000418518 GANCQ8TET4 914 aa8.69□□□□□ -1.02
LINCMD1-201ENST00000418518 C16orf78Q8WTQ4 265 aa8.69□□□□□ -1.02
LINCMD1-201ENST00000418518 KLK6Q92876 244 aa8.69□□□□□ -1.02
LINCMD1-201ENST00000418518 PPWD1Q96BP3 646 aaKnown RBP8.69□□□□□ -1.02
LINCMD1-201ENST00000418518 TBC1D20Q96BZ9 403 aa8.69□□□□□ -1.02
LINCMD1-201ENST00000418518 MIEF2Q96C03 454 aa8.69□□□□□ -1.02
LINCMD1-201ENST00000418518 C12orf66Q96MD2 445 aa8.69□□□□□ -1.02
LINCMD1-201ENST00000418518 OR2M4Q96R27 311 aa8.69□□□□□ -1.02
LINCMD1-201ENST00000418518 PRPF18Q99633 342 aaKnown RBP8.69□□□□□ -1.02
LINCMD1-201ENST00000418518 SLC29A1Q99808 456 aa8.69□□□□□ -1.02
LINCMD1-201ENST00000418518 CIB1Q99828 191 aa8.69□□□□□ -1.02
LINCMD1-201ENST00000418518 SARGQ9BW04 601 aa8.69□□□□□ -1.02
LINCMD1-201ENST00000418518 ZNF717Q9BY31 904 aaPredicted RBP8.69□□□□□ -1.02
LINCMD1-201ENST00000418518 UGT2B28Q9BY64 529 aa8.69□□□□□ -1.02
LINCMD1-201ENST00000418518 CHST8Q9H2A9 424 aa8.69□□□□□ -1.02
LINCMD1-201ENST00000418518 SEMA6AQ9H2E6 1030 aa8.69□□□□□ -1.02
LINCMD1-201ENST00000418518 KIR3DX1Q9H7L2 352 aa8.69□□□□□ -1.02
LINCMD1-201ENST00000418518 ZNF696Q9H7X3 374 aa8.69□□□□□ -1.02
LINCMD1-201ENST00000418518 KCNK12Q9HB15 430 aa8.69□□□□□ -1.02
LINCMD1-201ENST00000418518 FGF22Q9HCT0 170 aa8.69□□□□□ -1.02
LINCMD1-201ENST00000418518 DCAF13Q9NV06 445 aaKnown RBP8.69□□□□□ -1.02
LINCMD1-201ENST00000418518 CUEDC1Q9NWM3 386 aaPredicted RBP8.69□□□□□ -1.02
LINCMD1-201ENST00000418518 TAC3Q9UHF0 121 aa8.69□□□□□ -1.02
LINCMD1-201ENST00000418518 ADAM29Q9UKF5 820 aa8.69□□□□□ -1.02
LINCMD1-201ENST00000418518 PCOLCE2Q9UKZ9 415 aa8.69□□□□□ -1.02
LINCMD1-201ENST00000418518 PLAGL1Q9UM63 463 aa8.69□□□□□ -1.02
LINCMD1-201ENST00000418518 CORO2BQ9UQ03 480 aa8.69□□□□□ -1.02
LINCMD1-201ENST00000418518 AURKCQ9UQB9 309 aa8.69□□□□□ -1.02
LINCMD1-201ENST00000418518 ERVK-11Q9UQG0 969 aa8.69□□□□□ -1.02
LINCMD1-201ENST00000418518 INVSQ9Y283 1065 aa8.69□□□□□ -1.02
LINCMD1-201ENST00000418518 NCKAP1Q9Y2A7 1128 aa8.69□□□□□ -1.02
LINCMD1-201ENST00000418518 BTBD3Q9Y2F9 522 aa8.69□□□□□ -1.02
LINCMD1-201ENST00000418518 PCDHB11Q9Y5F2 797 aa8.69□□□□□ -1.02
LINCMD1-201ENST00000418518 HEBP2Q9Y5Z4 205 aa8.69□□□□□ -1.02
LINCMD1-201ENST00000418518 TP53BP1Q12888 1972 aaPredicted RBP8.68□□□□□ -1.02
LINCMD1-201ENST00000418518 GOLGA4Q13439 2230 aaKnown RBP8.68□□□□□ -1.02
LINCMD1-201ENST00000418518 TBC1D3DA0A087WVF3 549 aa8.68□□□□□ -1.02
LINCMD1-201ENST00000418518 TBC1D3IA0A087WXS9 549 aa8.68□□□□□ -1.02
LINCMD1-201ENST00000418518 TBC1D3EA0A087X179 549 aa8.68□□□□□ -1.02
LINCMD1-201ENST00000418518 TBC1D3KA0A087X1G2 549 aa8.68□□□□□ -1.02
LINCMD1-201ENST00000418518 ARHGAP10A1A4S6 786 aa8.68□□□□□ -1.02
LINCMD1-201ENST00000418518 TBC1D3FA6NER0 549 aaPredicted RBP8.68□□□□□ -1.02
LINCMD1-201ENST00000418518 EVPLLA8MZ36 301 aa8.68□□□□□ -1.02
LINCMD1-201ENST00000418518 TBC1D3LB9A6J9 549 aa8.68□□□□□ -1.02
LINCMD1-201ENST00000418518 CLIC1O00299 241 aa8.68□□□□□ -1.02
LINCMD1-201ENST00000418518 GSTA4O15217 222 aa8.68□□□□□ -1.02
LINCMD1-201ENST00000418518 GMNNO75496 209 aa8.68□□□□□ -1.02
LINCMD1-201ENST00000418518 APBB3O95704 486 aa8.68□□□□□ -1.02
LINCMD1-201ENST00000418518 SEMG1P04279 462 aa8.68□□□□□ -1.02
LINCMD1-201ENST00000418518 TBC1D3HP0C7X1 549 aa8.68□□□□□ -1.02
LINCMD1-201ENST00000418518 UBTFL6P0CB48 400 aaPredicted RBP8.68□□□□□ -1.02
LINCMD1-201ENST00000418518 NDUFV2P19404 249 aa8.68□□□□□ -1.02
LINCMD1-201ENST00000418518 MAGEA2P43356 314 aa8.68□□□□□ -1.02
LINCMD1-201ENST00000418518 ARFIP1P53367 373 aa8.68□□□□□ -1.02
LINCMD1-201ENST00000418518 CHRNB3Q05901 458 aa8.68□□□□□ -1.02
LINCMD1-201ENST00000418518 PRDX1Q06830 199 aaKnown RBP8.68□□□□□ -1.02
LINCMD1-201ENST00000418518 SLC14A1Q13336 389 aa8.68□□□□□ -1.02
LINCMD1-201ENST00000418518 VEZF1Q14119 521 aa8.68□□□□□ -1.02
LINCMD1-201ENST00000418518 CLCA4Q14CN2 919 aa8.68□□□□□ -1.02
LINCMD1-201ENST00000418518 RPE65Q16518 533 aa8.68□□□□□ -1.02
LINCMD1-201ENST00000418518 NKG7Q16617 165 aa8.68□□□□□ -1.02
LINCMD1-201ENST00000418518 HKDC1Q2TB90 917 aa8.68□□□□□ -1.02
LINCMD1-201ENST00000418518 NHSL2Q5HYW2 709 aa8.68□□□□□ -1.02
LINCMD1-201ENST00000418518 DEPDC1Q5TB30 811 aa8.68□□□□□ -1.02
LINCMD1-201ENST00000418518 KHDRBS2Q5VWX1 349 aaKnown RBP8.68□□□□□ -1.02
LINCMD1-201ENST00000418518 TBC1D3GQ6DHY5 549 aa8.68□□□□□ -1.02
LINCMD1-201ENST00000418518 TBC1D3CQ6IPX1 549 aa8.68□□□□□ -1.02
LINCMD1-201ENST00000418518 DUS1LQ6P1R4 473 aaKnown RBP8.68□□□□□ -1.02
LINCMD1-201ENST00000418518 ABRAXAS1Q6UWZ7 409 aa8.68□□□□□ -1.02
LINCMD1-201ENST00000418518 TMEM92Q6UXU6 159 aa8.68□□□□□ -1.02
LINCMD1-201ENST00000418518 GCNT7Q6ZNI0 430 aa8.68□□□□□ -1.02
LINCMD1-201ENST00000418518 CHST15Q7LFX5 561 aaPredicted RBP8.68□□□□□ -1.02
LINCMD1-201ENST00000418518 ANKRD46Q86W74 232 aa8.68□□□□□ -1.02
LINCMD1-201ENST00000418518 PTOV1Q86YD1 416 aa8.68□□□□□ -1.02
LINCMD1-201ENST00000418518 PHACTR4Q8IZ21 702 aa8.68□□□□□ -1.02
LINCMD1-201ENST00000418518 TBC1D3Q8IZP1 549 aaPredicted RBP8.68□□□□□ -1.02
LINCMD1-201ENST00000418518 SYNPOQ8N3V7 929 aa8.68□□□□□ -1.02
LINCMD1-201ENST00000418518 GALNT4Q8N4A0 578 aa8.68□□□□□ -1.02
LINCMD1-201ENST00000418518 ANKRD53Q8N9V6 530 aa8.68□□□□□ -1.02
LINCMD1-201ENST00000418518 GPR156Q8NFN8 814 aa8.68□□□□□ -1.02
LINCMD1-201ENST00000418518 OR2A1Q8NGT9 310 aa8.68□□□□□ -1.02
LINCMD1-201ENST00000418518 WDR48Q8TAF3 677 aa8.68□□□□□ -1.02
LINCMD1-201ENST00000418518 ZFP90Q8TF47 636 aa8.68□□□□□ -1.02
LINCMD1-201ENST00000418518 FIG4Q92562 907 aa8.68□□□□□ -1.02
LINCMD1-201ENST00000418518 GFM2Q969S9 779 aaKnown RBP8.68□□□□□ -1.02
LINCMD1-201ENST00000418518 SH3KBP1Q96B97 665 aa8.68□□□□□ -1.02
LINCMD1-201ENST00000418518 AURKBQ96GD4 344 aaPredicted RBP8.68□□□□□ -1.02
LINCMD1-201ENST00000418518 WDR92Q96MX6 357 aa8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms