RNA–Protein interactions for RNA: ENST00000417664.6

SSBP3-205, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 5 BASIC

Gene SSBP3, Length 1,666 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-205ENST00000417664 GORASP2Q9H8Y8 452 aa16.11■□□□□ 0.17
SSBP3-205ENST00000417664 GMPR2Q9P2T1 348 aaKnown RBP16.11■□□□□ 0.17
SSBP3-205ENST00000417664 BTNL2Q9UIR0 455 aa16.11■□□□□ 0.17
SSBP3-205ENST00000417664 CNOT11Q9UKZ1 510 aaKnown RBP16.11■□□□□ 0.17
SSBP3-205ENST00000417664 ICKQ9UPZ9 632 aa16.11■□□□□ 0.17
SSBP3-205ENST00000417664 INVSQ9Y283 1065 aa16.11■□□□□ 0.17
SSBP3-205ENST00000417664 ZBTB32Q9Y2Y4 487 aaPredicted RBP16.11■□□□□ 0.17
SSBP3-205ENST00000417664 TRIOBPQ9H2D6 2365 aa16.11■□□□□ 0.17
SSBP3-205ENST00000417664 H7BY64 318 aa16.11■□□□□ 0.17
SSBP3-205ENST00000417664 PRICKLE3O43900 615 aaPredicted RBP16.11■□□□□ 0.17
SSBP3-205ENST00000417664 FCGR1AP12314 374 aa16.11■□□□□ 0.17
SSBP3-205ENST00000417664 HOXB6P17509 224 aaKnown RBP16.11■□□□□ 0.17
SSBP3-205ENST00000417664 DDX5P17844 614 aaKnown RBP16.11■□□□□ 0.17
SSBP3-205ENST00000417664 PTPN6P29350 595 aa16.11■□□□□ 0.17
SSBP3-205ENST00000417664 GRK3P35626 688 aa16.11■□□□□ 0.17
SSBP3-205ENST00000417664 PLIN5Q00G26 463 aa16.11■□□□□ 0.17
SSBP3-205ENST00000417664 SELPLGQ14242 412 aa16.11■□□□□ 0.17
SSBP3-205ENST00000417664 KHDRBS2Q5VWX1 349 aaKnown RBP16.11■□□□□ 0.17
SSBP3-205ENST00000417664 GLYATQ6IB77 296 aa16.11■□□□□ 0.17
SSBP3-205ENST00000417664 TLDC1Q6P9B6 456 aa16.11■□□□□ 0.17
SSBP3-205ENST00000417664 VN1R5Q7Z5H4 357 aa16.11■□□□□ 0.17
SSBP3-205ENST00000417664 SLC9B2Q86UD5 537 aa16.11■□□□□ 0.17
SSBP3-205ENST00000417664 PDSS2Q86YH6 399 aa16.11■□□□□ 0.17
SSBP3-205ENST00000417664 LILRA2Q8N149 483 aa16.11■□□□□ 0.17
SSBP3-205ENST00000417664 TBC1D19Q8N5T2 526 aa16.11■□□□□ 0.17
SSBP3-205ENST00000417664 TMEM102Q8N9M5 508 aaPredicted RBP16.11■□□□□ 0.17
SSBP3-205ENST00000417664 GFM2Q969S9 779 aaKnown RBP16.11■□□□□ 0.17
SSBP3-205ENST00000417664 TSACCQ96A04 125 aaPredicted RBP16.11■□□□□ 0.17
SSBP3-205ENST00000417664 NSMCE2Q96MF7 247 aa16.11■□□□□ 0.17
SSBP3-205ENST00000417664 PRAP1Q96NZ9 151 aa16.11■□□□□ 0.17
SSBP3-205ENST00000417664 PKP2Q99959 881 aa16.11■□□□□ 0.17
SSBP3-205ENST00000417664 CPPED1Q9BRF8 314 aaPredicted RBP16.11■□□□□ 0.17
SSBP3-205ENST00000417664 SARGQ9BW04 601 aa16.11■□□□□ 0.17
SSBP3-205ENST00000417664 MS4A8Q9BY19 250 aa16.11■□□□□ 0.17
SSBP3-205ENST00000417664 BHLHE41Q9C0J9 482 aaPredicted RBP16.11■□□□□ 0.17
SSBP3-205ENST00000417664 REEP4Q9H6H4 257 aa16.11■□□□□ 0.17
SSBP3-205ENST00000417664 C6orf106Q9H6K1 298 aaPredicted RBP16.11■□□□□ 0.17
SSBP3-205ENST00000417664 TMEM184CQ9NVA4 438 aa16.11■□□□□ 0.17
SSBP3-205ENST00000417664 CUEDC1Q9NWM3 386 aaPredicted RBP16.11■□□□□ 0.17
SSBP3-205ENST00000417664 WNT16Q9UBV4 365 aa16.11■□□□□ 0.17
SSBP3-205ENST00000417664 CYP8B1Q9UNU6 501 aa16.11■□□□□ 0.17
SSBP3-205ENST00000417664 CA5BQ9Y2D0 317 aa16.11■□□□□ 0.17
SSBP3-205ENST00000417664 GMEB1Q9Y692 573 aa16.11■□□□□ 0.17
SSBP3-205ENST00000417664 TRBC2A0A5B9 178 aa16.1■□□□□ 0.17
SSBP3-205ENST00000417664 GABRR3A8MPY1 467 aa16.1■□□□□ 0.17
SSBP3-205ENST00000417664 EVPLLA8MZ36 301 aa16.1■□□□□ 0.17
SSBP3-205ENST00000417664 FAM220BPB1ANY3 271 aa16.1■□□□□ 0.17
SSBP3-205ENST00000417664 SOX1O00570 391 aaPredicted RBP16.1■□□□□ 0.17
SSBP3-205ENST00000417664 RNASET2O00584 256 aaKnown RBP16.1■□□□□ 0.17
SSBP3-205ENST00000417664 CLEC3AO75596 197 aa16.1■□□□□ 0.17
SSBP3-205ENST00000417664 TNFP01375 233 aa16.1■□□□□ 0.17
SSBP3-205ENST00000417664 ZCCHC18P0CG32 403 aa16.1■□□□□ 0.17
SSBP3-205ENST00000417664 F3P13726 295 aa16.1■□□□□ 0.17
SSBP3-205ENST00000417664 GGT1P19440 569 aa16.1■□□□□ 0.17
SSBP3-205ENST00000417664 ACTR1BP42025 376 aa16.1■□□□□ 0.17
SSBP3-205ENST00000417664 WNT3P56703 355 aa16.1■□□□□ 0.17
SSBP3-205ENST00000417664 OR4D2P58180 307 aa16.1■□□□□ 0.17
SSBP3-205ENST00000417664 STARD6P59095 220 aa16.1■□□□□ 0.17
SSBP3-205ENST00000417664 ACTR1AP61163 376 aa16.1■□□□□ 0.17
SSBP3-205ENST00000417664 CSNK1G2P78368 415 aa16.1■□□□□ 0.17
SSBP3-205ENST00000417664 ABHD18Q0P651 414 aa16.1■□□□□ 0.17
SSBP3-205ENST00000417664 ILF3Q12906 894 aaKnown RBP eCLIP16.1■□□□□ 0.172e-9■□□□□ 9
SSBP3-205ENST00000417664 ALG11Q2TAA5 492 aa16.1■□□□□ 0.17
SSBP3-205ENST00000417664 HKDC1Q2TB90 917 aa16.1■□□□□ 0.17
SSBP3-205ENST00000417664 GRAMD1BQ3KR37 738 aa16.1■□□□□ 0.17
SSBP3-205ENST00000417664 TPRG1LQ5T0D9 272 aa16.1■□□□□ 0.17
SSBP3-205ENST00000417664 LPCAT4Q643R3 524 aa16.1■□□□□ 0.17
SSBP3-205ENST00000417664 ANO7Q6IWH7 933 aa16.1■□□□□ 0.17
SSBP3-205ENST00000417664 KBTBD2Q8IY47 623 aa16.1■□□□□ 0.17
SSBP3-205ENST00000417664 PHACTR4Q8IZ21 702 aa16.1■□□□□ 0.17
SSBP3-205ENST00000417664 PAPD5Q8NDF8 572 aaKnown RBP16.1■□□□□ 0.17
SSBP3-205ENST00000417664 ZNF548Q8NEK5 533 aaPredicted RBP16.1■□□□□ 0.17
SSBP3-205ENST00000417664 OR10A6Q8NH74 314 aa16.1■□□□□ 0.17
SSBP3-205ENST00000417664 SNX19Q92543 992 aa16.1■□□□□ 0.17
SSBP3-205ENST00000417664 SLC22A18Q96BI1 424 aa16.1■□□□□ 0.17
SSBP3-205ENST00000417664 BTBD9Q96Q07 612 aa16.1■□□□□ 0.17
SSBP3-205ENST00000417664 PHF12Q96QT6 1004 aa16.1■□□□□ 0.17
SSBP3-205ENST00000417664 PANX1Q96RD7 426 aa16.1■□□□□ 0.17
SSBP3-205ENST00000417664 MRPS30Q9NP92 439 aaKnown RBP16.1■□□□□ 0.17
SSBP3-205ENST00000417664 SCHIP1Q9P0W5 487 aaPredicted RBP16.1■□□□□ 0.17
SSBP3-205ENST00000417664 ADAM29Q9UKF5 820 aa16.1■□□□□ 0.17
SSBP3-205ENST00000417664 CA14Q9ULX7 337 aa16.1■□□□□ 0.17
SSBP3-205ENST00000417664 CROCCQ5TZA2 2017 aa16.1■□□□□ 0.17
SSBP3-205ENST00000417664 TCRBV5S2A0A599 114 aa16.09■□□□□ 0.17
SSBP3-205ENST00000417664 ELOVL7A1L3X0 281 aa16.09■□□□□ 0.17
SSBP3-205ENST00000417664 A6NCN8 305 aa16.09■□□□□ 0.17
SSBP3-205ENST00000417664 SCELO95171 688 aa16.09■□□□□ 0.17
SSBP3-205ENST00000417664 RASGRP1O95267 797 aa16.09■□□□□ 0.17
SSBP3-205ENST00000417664 PPIBP23284 216 aaKnown RBP16.09■□□□□ 0.17
SSBP3-205ENST00000417664 PSMB5P28074 263 aa16.09■□□□□ 0.17
SSBP3-205ENST00000417664 ARFIP1P53367 373 aa16.09■□□□□ 0.17
SSBP3-205ENST00000417664 POLE2P56282 527 aa16.09■□□□□ 0.17
SSBP3-205ENST00000417664 PDE7AQ13946 482 aa16.09■□□□□ 0.17
SSBP3-205ENST00000417664 CYP51A1Q16850 503 aa16.09■□□□□ 0.17
SSBP3-205ENST00000417664 TMEM31Q5JXX7 168 aa16.09■□□□□ 0.17
SSBP3-205ENST00000417664 RD3Q7Z3Z2 195 aa16.09■□□□□ 0.17
SSBP3-205ENST00000417664 CALHM3Q86XJ0 350 aa16.09■□□□□ 0.17
SSBP3-205ENST00000417664 TICAM1Q8IUC6 712 aa16.09■□□□□ 0.17
SSBP3-205ENST00000417664 ADGRG5Q8IZF4 528 aa16.09■□□□□ 0.17
SSBP3-205ENST00000417664 NATD1Q8N6N6 113 aa16.09■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms