RNA–Protein interactions for RNA: ENST00000417285.6

VEGFA-208, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 1,081 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-208ENST00000417285 EDN3P14138 238 aa23.97■■□□□ 1.43
VEGFA-208ENST00000417285 BCL6P41182 706 aa23.97■■□□□ 1.43
VEGFA-208ENST00000417285 RPL21P46778 160 aaKnown RBP23.97■■□□□ 1.43
VEGFA-208ENST00000417285 MAT1AQ00266 395 aaKnown RBP23.97■■□□□ 1.43
VEGFA-208ENST00000417285 MDC1Q14676 2089 aaKnown RBP23.97■■□□□ 1.43
VEGFA-208ENST00000417285 PHKG1Q16816 387 aa23.97■■□□□ 1.43
VEGFA-208ENST00000417285 ASPGQ86U10 573 aa23.97■■□□□ 1.43
VEGFA-208ENST00000417285 CATSPER1Q8NEC5 780 aa23.97■■□□□ 1.43
VEGFA-208ENST00000417285 ABHD11Q8NFV4 315 aa23.97■■□□□ 1.43
VEGFA-208ENST00000417285 OR51Q1Q8NH59 317 aa23.97■■□□□ 1.43
VEGFA-208ENST00000417285 PDLIM5Q96HC4 596 aaKnown RBP23.97■■□□□ 1.43
VEGFA-208ENST00000417285 IMMP1LQ96LU5 166 aa23.97■■□□□ 1.43
VEGFA-208ENST00000417285 OLFM1Q99784 485 aa23.97■■□□□ 1.43
VEGFA-208ENST00000417285 ANKHQ9HCJ1 492 aa23.97■■□□□ 1.43
VEGFA-208ENST00000417285 ERRFI1Q9UJM3 462 aaPredicted RBP23.97■■□□□ 1.43
VEGFA-208ENST00000417285 SLC22A7Q9Y694 548 aa23.97■■□□□ 1.43
VEGFA-208ENST00000417285 TRAV17A0A0B4J275 112 aa23.96■■□□□ 1.43
VEGFA-208ENST00000417285 E7ESA3 106 aa23.96■■□□□ 1.43
VEGFA-208ENST00000417285 FANCGO15287 622 aa23.96■■□□□ 1.43
VEGFA-208ENST00000417285 TP73O15350 636 aa23.96■■□□□ 1.43
VEGFA-208ENST00000417285 LCMT2O60294 686 aaKnown RBP23.96■■□□□ 1.43
VEGFA-208ENST00000417285 UQCRHP07919 91 aa23.96■■□□□ 1.43
VEGFA-208ENST00000417285 IL10P22301 178 aa23.96■■□□□ 1.43
VEGFA-208ENST00000417285 CCR8P51685 355 aa23.96■■□□□ 1.43
VEGFA-208ENST00000417285 PCOLCEQ15113 449 aa23.96■■□□□ 1.43
VEGFA-208ENST00000417285 FAM180AQ6UWF9 173 aa23.96■■□□□ 1.43
VEGFA-208ENST00000417285 SLC26A11Q86WA9 606 aa23.96■■□□□ 1.43
VEGFA-208ENST00000417285 TBC1D19Q8N5T2 526 aa23.96■■□□□ 1.43
VEGFA-208ENST00000417285 MFSD9Q8NBP5 474 aa23.96■■□□□ 1.43
VEGFA-208ENST00000417285 OR56A3Q8NH54 315 aa23.96■■□□□ 1.43
VEGFA-208ENST00000417285 SARGQ9BW04 601 aa23.96■■□□□ 1.43
VEGFA-208ENST00000417285 VN1R1Q9GZP7 353 aa23.96■■□□□ 1.43
VEGFA-208ENST00000417285 NSMCE4AQ9NXX6 385 aa23.96■■□□□ 1.43
VEGFA-208ENST00000417285 C19orf25Q9UFG5 118 aaPredicted RBP23.96■■□□□ 1.43
VEGFA-208ENST00000417285 TEKT2Q9UIF3 430 aa23.96■■□□□ 1.43
VEGFA-208ENST00000417285 FAM187AA6NFU0 413 aa23.95■■□□□ 1.42
VEGFA-208ENST00000417285 LDLRP01130 860 aa23.95■■□□□ 1.42
VEGFA-208ENST00000417285 ENO2P09104 434 aaPredicted RBP23.95■■□□□ 1.42
VEGFA-208ENST00000417285 SLC35G6P0C7Q6 338 aa23.95■■□□□ 1.42
VEGFA-208ENST00000417285 CDH1P12830 882 aa23.95■■□□□ 1.42
VEGFA-208ENST00000417285 TNFSF10P50591 281 aa23.95■■□□□ 1.42
VEGFA-208ENST00000417285 CALCOCO2Q13137 446 aa23.95■■□□□ 1.42
VEGFA-208ENST00000417285 FASTKD3Q14CZ7 662 aaKnown RBP23.95■■□□□ 1.42
VEGFA-208ENST00000417285 MAATS1Q7Z4T9 603 aa23.95■■□□□ 1.42
VEGFA-208ENST00000417285 STRA8Q7Z7C7 330 aa23.95■■□□□ 1.42
VEGFA-208ENST00000417285 ZBED8Q8IZ13 594 aa23.95■■□□□ 1.42
VEGFA-208ENST00000417285 SIRT6Q8N6T7 355 aa23.95■■□□□ 1.42
VEGFA-208ENST00000417285 BCORP1Q8N888 145 aa23.95■■□□□ 1.42
VEGFA-208ENST00000417285 OR4K1Q8NGD4 311 aa23.95■■□□□ 1.42
VEGFA-208ENST00000417285 FBXL8Q96CD0 374 aa23.95■■□□□ 1.42
VEGFA-208ENST00000417285 MACROD1Q9BQ69 325 aa23.95■■□□□ 1.42
VEGFA-208ENST00000417285 RNF32Q9H0A6 362 aa23.95■■□□□ 1.42
VEGFA-208ENST00000417285 SH2B3Q9UQQ2 575 aa23.95■■□□□ 1.42
VEGFA-208ENST00000417285 FEZF1A0PJY2 475 aa23.94■■□□□ 1.42
VEGFA-208ENST00000417285 STATHP02808 62 aa23.94■■□□□ 1.42
VEGFA-208ENST00000417285 XCR1P46094 333 aa23.94■■□□□ 1.42
VEGFA-208ENST00000417285 PGGT1BP53609 377 aa23.94■■□□□ 1.42
VEGFA-208ENST00000417285 CBLBQ13191 982 aa23.94■■□□□ 1.42
VEGFA-208ENST00000417285 HERC3Q15034 1050 aa23.94■■□□□ 1.42
VEGFA-208ENST00000417285 MINDY4Q4G0A6 757 aa23.94■■□□□ 1.42
VEGFA-208ENST00000417285 NIPAL1Q6NVV3 410 aa23.94■■□□□ 1.42
VEGFA-208ENST00000417285 CPEB2Q7Z5Q1 589 aaKnown RBP23.94■■□□□ 1.42
VEGFA-208ENST00000417285 KCT2Q8NC54 265 aa23.94■■□□□ 1.42
VEGFA-208ENST00000417285 PLA2G3Q9NZ20 509 aa23.94■■□□□ 1.42
VEGFA-208ENST00000417285 STMN3Q9NZ72 180 aa23.94■■□□□ 1.42
VEGFA-208ENST00000417285 MOCS1Q9NZB8 636 aa23.94■■□□□ 1.42
VEGFA-208ENST00000417285 SGK494L7N484 410 aa23.93■■□□□ 1.42
VEGFA-208ENST00000417285 RNF224P0DH78 156 aa23.93■■□□□ 1.42
VEGFA-208ENST00000417285 IL1RNP18510 177 aa23.93■■□□□ 1.42
VEGFA-208ENST00000417285 SAT1P21673 171 aa23.93■■□□□ 1.42
VEGFA-208ENST00000417285 AGTR2P50052 363 aa23.93■■□□□ 1.42
VEGFA-208ENST00000417285 SKP1P63208 163 aa23.93■■□□□ 1.42
VEGFA-208ENST00000417285 ILF2Q12905 390 aaKnown RBP23.93■■□□□ 1.42
VEGFA-208ENST00000417285 PWP1Q13610 501 aa23.93■■□□□ 1.42
VEGFA-208ENST00000417285 INAQ16352 499 aa23.93■■□□□ 1.42
VEGFA-208ENST00000417285 MFSD4BQ5TF39 518 aa23.93■■□□□ 1.42
VEGFA-208ENST00000417285 ABHD17BQ5VST6 288 aa23.93■■□□□ 1.42
VEGFA-208ENST00000417285 PRSS41Q7RTY9 318 aa23.93■■□□□ 1.42
VEGFA-208ENST00000417285 ZC3HC1Q86WB0 502 aaKnown RBP23.93■■□□□ 1.42
VEGFA-208ENST00000417285 SPATA4Q8NEY3 305 aa23.93■■□□□ 1.42
VEGFA-208ENST00000417285 ANKRD7Q92527 254 aa23.93■■□□□ 1.42
VEGFA-208ENST00000417285 ERP44Q9BS26 406 aa23.93■■□□□ 1.42
VEGFA-208ENST00000417285 WHRNQ9P202 907 aa23.93■■□□□ 1.42
VEGFA-208ENST00000417285 PSAT1Q9Y617 370 aa23.93■■□□□ 1.42
VEGFA-208ENST00000417285 FAM95CA0A1B0GW59 222 aa23.92■■□□□ 1.42
VEGFA-208ENST00000417285 TRBC2A0A5B9 178 aa23.92■■□□□ 1.42
VEGFA-208ENST00000417285 JRKO75564 520 aa23.92■■□□□ 1.42
VEGFA-208ENST00000417285 ITGAMP11215 1152 aa23.92■■□□□ 1.42
VEGFA-208ENST00000417285 ZNF37AP17032 561 aaPredicted RBP23.92■■□□□ 1.42
VEGFA-208ENST00000417285 CASQ1P31415 396 aa23.92■■□□□ 1.42
VEGFA-208ENST00000417285 SNRPNP63162 240 aaKnown RBP23.92■■□□□ 1.42
VEGFA-208ENST00000417285 MRPS25P82663 173 aaKnown RBP23.92■■□□□ 1.42
VEGFA-208ENST00000417285 CSHL1Q14406 222 aa23.92■■□□□ 1.42
VEGFA-208ENST00000417285 ZXDCQ2QGD7 858 aaPredicted RBP23.92■■□□□ 1.42
VEGFA-208ENST00000417285 PLAG1Q6DJT9 500 aa23.92■■□□□ 1.42
VEGFA-208ENST00000417285 MAMDC2Q7Z304 686 aaPredicted RBP23.92■■□□□ 1.42
VEGFA-208ENST00000417285 NKAPQ8N5F7 415 aaKnown RBP23.92■■□□□ 1.42
VEGFA-208ENST00000417285 PYROXD1Q8WU10 500 aa23.92■■□□□ 1.42
VEGFA-208ENST00000417285 PYCR2Q96C36 320 aa23.92■■□□□ 1.42
VEGFA-208ENST00000417285 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP23.92■■□□□ 1.423e-8■■□□□ 12.3
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms