RNA–Protein interactions for RNA: ENST00000415357.1

LINC01090-201, Transcript of long intergenic non-protein coding RNA 1090, humanhuman

TSL 3 BASIC

Gene LINC01090, Length 881 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01090-201ENST00000415357 RBBP8Q99708 897 aa9.13□□□□□ -0.95
LINC01090-201ENST00000415357 HIST1H2AJQ99878 128 aa9.13□□□□□ -0.95
LINC01090-201ENST00000415357 H2AFJQ9BTM1 129 aa9.13□□□□□ -0.95
LINC01090-201ENST00000415357 NUDT9Q9BW91 350 aa9.13□□□□□ -0.95
LINC01090-201ENST00000415357 SPNS1Q9H2V7 528 aa9.13□□□□□ -0.95
LINC01090-201ENST00000415357 LRRC4CQ9HCJ2 640 aa9.13□□□□□ -0.95
LINC01090-201ENST00000415357 ZNF304Q9HCX3 659 aa9.13□□□□□ -0.95
LINC01090-201ENST00000415357 TMEM184CQ9NVA4 438 aa9.13□□□□□ -0.95
LINC01090-201ENST00000415357 P4HTMQ9NXG6 502 aa9.13□□□□□ -0.95
LINC01090-201ENST00000415357 NSMCE4AQ9NXX6 385 aa9.13□□□□□ -0.95
LINC01090-201ENST00000415357 MED13Q9UHV7 2174 aa9.13□□□□□ -0.95
LINC01090-201ENST00000415357 PCM1Q15154 2024 aa9.12□□□□□ -0.95
LINC01090-201ENST00000415357 A0A0A6YYC8 382 aaPredicted RBP9.12□□□□□ -0.95
LINC01090-201ENST00000415357 VSTM2BA6NLU5 285 aa9.12□□□□□ -0.95
LINC01090-201ENST00000415357 I3L1I5 382 aaPredicted RBP9.12□□□□□ -0.95
LINC01090-201ENST00000415357 PEX12O00623 359 aa9.12□□□□□ -0.95
LINC01090-201ENST00000415357 SOCS6O14544 535 aa9.12□□□□□ -0.95
LINC01090-201ENST00000415357 FOXS1O43638 330 aa9.12□□□□□ -0.95
LINC01090-201ENST00000415357 LCMT2O60294 686 aaKnown RBP9.12□□□□□ -0.95
LINC01090-201ENST00000415357 CEACAM4O75871 244 aa9.12□□□□□ -0.95
LINC01090-201ENST00000415357 WISP3O95389 354 aaPredicted RBP9.12□□□□□ -0.95
LINC01090-201ENST00000415357 ALBP02768 609 aa9.12□□□□□ -0.95
LINC01090-201ENST00000415357 PIM1P11309 404 aaPredicted RBP9.12□□□□□ -0.95
LINC01090-201ENST00000415357 NPPBP16860 134 aa9.12□□□□□ -0.95
LINC01090-201ENST00000415357 GP5P40197 560 aa9.12□□□□□ -0.95
LINC01090-201ENST00000415357 PGDP52209 483 aa9.12□□□□□ -0.95
LINC01090-201ENST00000415357 AP1S2P56377 157 aa9.12□□□□□ -0.95
LINC01090-201ENST00000415357 MAT1AQ00266 395 aaKnown RBP9.12□□□□□ -0.95
LINC01090-201ENST00000415357 GUCY2DQ02846 1103 aa9.12□□□□□ -0.95
LINC01090-201ENST00000415357 CAV1Q03135 178 aa9.12□□□□□ -0.95
LINC01090-201ENST00000415357 TLE1Q04724 770 aa9.12□□□□□ -0.95
LINC01090-201ENST00000415357 USP10Q14694 798 aaKnown RBP9.12□□□□□ -0.95
LINC01090-201ENST00000415357 SYT16Q17RD7 645 aa9.12□□□□□ -0.95
LINC01090-201ENST00000415357 C18orf21Q32NC0 220 aaPredicted RBP9.12□□□□□ -0.95
LINC01090-201ENST00000415357 KBTBD12Q3ZCT8 623 aa9.12□□□□□ -0.95
LINC01090-201ENST00000415357 VWA2Q5GFL6 755 aa9.12□□□□□ -0.95
LINC01090-201ENST00000415357 DCAF10Q5QP82 559 aa9.12□□□□□ -0.95
LINC01090-201ENST00000415357 CAPN13Q6MZZ7 669 aaPredicted RBP9.12□□□□□ -0.95
LINC01090-201ENST00000415357 PRMT9Q6P2P2 845 aa9.12□□□□□ -0.95
LINC01090-201ENST00000415357 SLCO4C1Q6ZQN7 724 aa9.12□□□□□ -0.95
LINC01090-201ENST00000415357 MED25Q71SY5 747 aa9.12□□□□□ -0.95
LINC01090-201ENST00000415357 ATCAYQ86WG3 371 aa9.12□□□□□ -0.95
LINC01090-201ENST00000415357 NKAPQ8N5F7 415 aaKnown RBP9.12□□□□□ -0.95
LINC01090-201ENST00000415357 PPM1NQ8N819 430 aa9.12□□□□□ -0.95
LINC01090-201ENST00000415357 TMEM102Q8N9M5 508 aaPredicted RBP9.12□□□□□ -0.95
LINC01090-201ENST00000415357 ZNF740Q8NDX6 193 aa9.12□□□□□ -0.95
LINC01090-201ENST00000415357 ZCCHC10Q8TBK6 192 aa9.12□□□□□ -0.95
LINC01090-201ENST00000415357 STT3BQ8TCJ2 826 aa9.12□□□□□ -0.95
LINC01090-201ENST00000415357 FBF1Q8TES7 1133 aa9.12□□□□□ -0.95
LINC01090-201ENST00000415357 CDKL2Q92772 493 aa9.12□□□□□ -0.95
LINC01090-201ENST00000415357 MMABQ96EY8 250 aaPredicted RBP9.12□□□□□ -0.95
LINC01090-201ENST00000415357 TSNARE1Q96NA8 513 aa9.12□□□□□ -0.95
LINC01090-201ENST00000415357 GPR22Q99680 433 aa9.12□□□□□ -0.95
LINC01090-201ENST00000415357 CPNE1Q99829 537 aa9.12□□□□□ -0.95
LINC01090-201ENST00000415357 CRB3Q9BUF7 120 aa9.12□□□□□ -0.95
LINC01090-201ENST00000415357 YIPF2Q9BWQ6 316 aa9.12□□□□□ -0.95
LINC01090-201ENST00000415357 TRIM54Q9BYV2 358 aa9.12□□□□□ -0.95
LINC01090-201ENST00000415357 PCBD2Q9H0N5 130 aa9.12□□□□□ -0.95
LINC01090-201ENST00000415357 SLC26A1Q9H2B4 701 aa9.12□□□□□ -0.95
LINC01090-201ENST00000415357 WDR54Q9H977 334 aa9.12□□□□□ -0.95
LINC01090-201ENST00000415357 ZDHHC18Q9NUE0 388 aa9.12□□□□□ -0.95
LINC01090-201ENST00000415357 TXNDC16Q9P2K2 825 aa9.12□□□□□ -0.95
LINC01090-201ENST00000415357 TRPC4Q9UBN4 977 aa9.12□□□□□ -0.95
LINC01090-201ENST00000415357 CTNNAL1Q9UBT7 734 aa9.12□□□□□ -0.95
LINC01090-201ENST00000415357 FBXL4Q9UKA2 621 aa9.12□□□□□ -0.95
LINC01090-201ENST00000415357 PCDHGA9Q9Y5G4 932 aaKnown RBP9.12□□□□□ -0.95
LINC01090-201ENST00000415357 HS3ST3B1Q9Y662 390 aa9.12□□□□□ -0.95
LINC01090-201ENST00000415357 MDC1Q14676 2089 aaKnown RBP9.12□□□□□ -0.95
LINC01090-201ENST00000415357 ANKRD12Q6UB98 2062 aa9.11□□□□□ -0.95
LINC01090-201ENST00000415357 CTAGE15A4D2H0 777 aa9.11□□□□□ -0.95
LINC01090-201ENST00000415357 FAM181BA6NEQ2 426 aa9.11□□□□□ -0.95
LINC01090-201ENST00000415357 NCF1BA6NI72 391 aaPredicted RBP9.11□□□□□ -0.95
LINC01090-201ENST00000415357 NCF1CA8MVU1 366 aaPredicted RBP9.11□□□□□ -0.95
LINC01090-201ENST00000415357 SHISA8B8ZZ34 492 aa9.11□□□□□ -0.95
LINC01090-201ENST00000415357 OIP5O43482 229 aa9.11□□□□□ -0.95
LINC01090-201ENST00000415357 CD63P08962 238 aa9.11□□□□□ -0.95
LINC01090-201ENST00000415357 ENO2P09104 434 aaPredicted RBP9.11□□□□□ -0.95
LINC01090-201ENST00000415357 GSTA2P09210 222 aa9.11□□□□□ -0.95
LINC01090-201ENST00000415357 ZGLP1P0C6A0 271 aa9.11□□□□□ -0.95
LINC01090-201ENST00000415357 CCDC166P0CW27 439 aa9.11□□□□□ -0.95
LINC01090-201ENST00000415357 NCF1P14598 390 aaPredicted RBP9.11□□□□□ -0.95
LINC01090-201ENST00000415357 IL1RNP18510 177 aa9.11□□□□□ -0.95
LINC01090-201ENST00000415357 MMP11P24347 488 aa9.11□□□□□ -0.95
LINC01090-201ENST00000415357 CCND1P24385 295 aa9.11□□□□□ -0.95
LINC01090-201ENST00000415357 CASRP41180 1078 aa9.11□□□□□ -0.95
LINC01090-201ENST00000415357 EFNA3P52797 238 aa9.11□□□□□ -0.95
LINC01090-201ENST00000415357 SLC12A2P55011 1212 aa9.11□□□□□ -0.95
LINC01090-201ENST00000415357 RRADP55042 308 aa9.11□□□□□ -0.95
LINC01090-201ENST00000415357 RPS15AP62244 130 aaKnown RBP9.11□□□□□ -0.95
LINC01090-201ENST00000415357 POU4F1Q01851 419 aa9.11□□□□□ -0.95
LINC01090-201ENST00000415357 RELAQ04206 551 aa9.11□□□□□ -0.95
LINC01090-201ENST00000415357 OCA2Q04671 838 aa9.11□□□□□ -0.95
LINC01090-201ENST00000415357 KLC1Q07866 573 aa9.11□□□□□ -0.95
LINC01090-201ENST00000415357 KLRB1Q12918 225 aa9.11□□□□□ -0.95
LINC01090-201ENST00000415357 SLMAPQ14BN4 828 aa9.11□□□□□ -0.95
LINC01090-201ENST00000415357 RBBP7Q16576 425 aa9.11□□□□□ -0.95
LINC01090-201ENST00000415357 NADK2Q4G0N4 442 aa9.11□□□□□ -0.95
LINC01090-201ENST00000415357 FBXO48Q5FWF7 155 aa9.11□□□□□ -0.95
LINC01090-201ENST00000415357 CATSPEREQ5SY80 951 aa9.11□□□□□ -0.95
LINC01090-201ENST00000415357 KIRREL2Q6UWL6 708 aa9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms