RNA–Protein interactions for RNA: ENST00000415107.5

ATG4B-207, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 5

Gene ATG4B, Length 356 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-207ENST00000415107 NLNQ9BYT8 704 aa11.37□□□□□ -0.59
ATG4B-207ENST00000415107 DPH1Q9BZG8 443 aa11.37□□□□□ -0.59
ATG4B-207ENST00000415107 ULBP3Q9BZM4 244 aa11.37□□□□□ -0.59
ATG4B-207ENST00000415107 SLC6A16Q9GZN6 736 aa11.37□□□□□ -0.59
ATG4B-207ENST00000415107 ACBD3Q9H3P7 528 aa11.37□□□□□ -0.59
ATG4B-207ENST00000415107 CENPHQ9H3R5 247 aa11.37□□□□□ -0.59
ATG4B-207ENST00000415107 GSTO2Q9H4Y5 243 aa11.37□□□□□ -0.59
ATG4B-207ENST00000415107 TRPS1Q9UHF7 1281 aa11.37□□□□□ -0.59
ATG4B-207ENST00000415107 ANGPTL3Q9Y5C1 460 aa11.37□□□□□ -0.59
ATG4B-207ENST00000415107 PCDHGA11Q9Y5H2 935 aa11.37□□□□□ -0.59
ATG4B-207ENST00000415107 SLC22A7Q9Y694 548 aa11.37□□□□□ -0.59
ATG4B-207ENST00000415107 A0A1B0GX78 115 aa11.36□□□□□ -0.59
ATG4B-207ENST00000415107 HMGB1P1B2RPK0 211 aaPredicted RBP11.36□□□□□ -0.59
ATG4B-207ENST00000415107 TERTO14746 1132 aaKnown RBP11.36□□□□□ -0.59
ATG4B-207ENST00000415107 DSCR3O14972 297 aa11.36□□□□□ -0.59
ATG4B-207ENST00000415107 P2RX6O15547 441 aa11.36□□□□□ -0.59
ATG4B-207ENST00000415107 TLX3O43711 291 aaPredicted RBP11.36□□□□□ -0.59
ATG4B-207ENST00000415107 OR1F1O43749 312 aa11.36□□□□□ -0.59
ATG4B-207ENST00000415107 RAD1O60671 282 aa11.36□□□□□ -0.59
ATG4B-207ENST00000415107 SPAG7O75391 227 aa11.36□□□□□ -0.59
ATG4B-207ENST00000415107 KIAA0754O94854 1291 aa11.36□□□□□ -0.59
ATG4B-207ENST00000415107 SUPT7LO94864 414 aa11.36□□□□□ -0.59
ATG4B-207ENST00000415107 SNUPNO95149 360 aaKnown RBP11.36□□□□□ -0.59
ATG4B-207ENST00000415107 BPGMP07738 259 aa11.36□□□□□ -0.59
ATG4B-207ENST00000415107 VARSP26640 1264 aaKnown RBP11.36□□□□□ -0.59
ATG4B-207ENST00000415107 CCNG1P51959 295 aa11.36□□□□□ -0.59
ATG4B-207ENST00000415107 PKNOX1P55347 436 aa11.36□□□□□ -0.59
ATG4B-207ENST00000415107 VSX2P58304 361 aaPredicted RBP11.36□□□□□ -0.59
ATG4B-207ENST00000415107 RGS1Q08116 209 aa11.36□□□□□ -0.59
ATG4B-207ENST00000415107 HIST2H2ACQ16777 129 aaPredicted RBP11.36□□□□□ -0.59
ATG4B-207ENST00000415107 NDUFA9Q16795 377 aa11.36□□□□□ -0.59
ATG4B-207ENST00000415107 HIST2H2AA3Q6FI13 130 aa11.36□□□□□ -0.59
ATG4B-207ENST00000415107 MED27Q6P2C8 311 aa11.36□□□□□ -0.59
ATG4B-207ENST00000415107 RNF165Q6ZSG1 346 aa11.36□□□□□ -0.59
ATG4B-207ENST00000415107 PLD3Q8IV08 490 aa11.36□□□□□ -0.59
ATG4B-207ENST00000415107 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP11.36□□□□□ -0.59
ATG4B-207ENST00000415107 CCDC63Q8NA47 563 aa11.36□□□□□ -0.59
ATG4B-207ENST00000415107 SLC38A9Q8NBW4 561 aa11.36□□□□□ -0.59
ATG4B-207ENST00000415107 ZNF740Q8NDX6 193 aa11.36□□□□□ -0.59
ATG4B-207ENST00000415107 OR52B6Q8NGF0 335 aa11.36□□□□□ -0.59
ATG4B-207ENST00000415107 MDM1Q8TC05 714 aa11.36□□□□□ -0.59
ATG4B-207ENST00000415107 CREB3L4Q8TEY5 395 aa11.36□□□□□ -0.59
ATG4B-207ENST00000415107 SLC13A3Q8WWT9 602 aa11.36□□□□□ -0.59
ATG4B-207ENST00000415107 SREK1Q8WXA9 508 aaKnown RBP11.36□□□□□ -0.59
ATG4B-207ENST00000415107 C10orf90Q96M02 699 aa11.36□□□□□ -0.59
ATG4B-207ENST00000415107 NSUN5Q96P11 429 aaKnown RBP11.36□□□□□ -0.59
ATG4B-207ENST00000415107 NDC1Q9BTX1 674 aa11.36□□□□□ -0.59
ATG4B-207ENST00000415107 SPRTNQ9H040 489 aaPredicted RBP11.36□□□□□ -0.59
ATG4B-207ENST00000415107 NOL11Q9H8H0 719 aaKnown RBP11.36□□□□□ -0.59
ATG4B-207ENST00000415107 ACTR8Q9H981 624 aa11.36□□□□□ -0.59
ATG4B-207ENST00000415107 CLK4Q9HAZ1 481 aaKnown RBP11.36□□□□□ -0.59
ATG4B-207ENST00000415107 LHX9Q9NQ69 397 aa11.36□□□□□ -0.59
ATG4B-207ENST00000415107 CUTCQ9NTM9 273 aa11.36□□□□□ -0.59
ATG4B-207ENST00000415107 SLC17A7Q9P2U7 560 aa11.36□□□□□ -0.59
ATG4B-207ENST00000415107 ZNF490Q9ULM2 529 aaPredicted RBP11.36□□□□□ -0.59
ATG4B-207ENST00000415107 RUVBL1Q9Y265 456 aaKnown RBP11.36□□□□□ -0.59
ATG4B-207ENST00000415107 PCDHGA6Q9Y5G7 932 aa11.36□□□□□ -0.59
ATG4B-207ENST00000415107 APC2O95996 2303 aa11.36□□□□□ -0.59
ATG4B-207ENST00000415107 A0A087WV48 116 aa11.35□□□□□ -0.59
ATG4B-207ENST00000415107 FEZF1A0PJY2 475 aa11.35□□□□□ -0.59
ATG4B-207ENST00000415107 SERTM1A2A2V5 107 aa11.35□□□□□ -0.59
ATG4B-207ENST00000415107 HYKKA2RU49 373 aa11.35□□□□□ -0.59
ATG4B-207ENST00000415107 URADA6NGE7 173 aa11.35□□□□□ -0.59
ATG4B-207ENST00000415107 C1QTNF9BB2RNN3 333 aa11.35□□□□□ -0.59
ATG4B-207ENST00000415107 C21orf140B9A014 251 aa11.35□□□□□ -0.59
ATG4B-207ENST00000415107 H0YIG0 161 aa11.35□□□□□ -0.59
ATG4B-207ENST00000415107 MEN1O00255 615 aa11.35□□□□□ -0.59
ATG4B-207ENST00000415107 FOXE1O00358 373 aaPredicted RBP11.35□□□□□ -0.59
ATG4B-207ENST00000415107 NPHS1O60500 1241 aa11.35□□□□□ -0.59
ATG4B-207ENST00000415107 NSA2O95478 260 aaKnown RBP11.35□□□□□ -0.59
ATG4B-207ENST00000415107 ESRRBO95718 433 aa11.35□□□□□ -0.59
ATG4B-207ENST00000415107 TBX6O95947 436 aaPredicted RBP11.35□□□□□ -0.59
ATG4B-207ENST00000415107 ENO1P06733 434 aaKnown RBP11.35□□□□□ -0.59
ATG4B-207ENST00000415107 CTSBP07858 339 aa11.35□□□□□ -0.59
ATG4B-207ENST00000415107 CD63P08962 238 aa11.35□□□□□ -0.59
ATG4B-207ENST00000415107 RAB40ALP0C0E4 278 aa11.35□□□□□ -0.59
ATG4B-207ENST00000415107 C1QTNF9P0C862 333 aa11.35□□□□□ -0.59
ATG4B-207ENST00000415107 SMIM10L1P0DMW3 83 aa11.35□□□□□ -0.59
ATG4B-207ENST00000415107 STAT5AP42229 794 aa11.35□□□□□ -0.59
ATG4B-207ENST00000415107 TSFMP43897 325 aaKnown RBP11.35□□□□□ -0.59
ATG4B-207ENST00000415107 SERPINB4P48594 390 aa11.35□□□□□ -0.59
ATG4B-207ENST00000415107 ATP1A2P50993 1020 aa11.35□□□□□ -0.59
ATG4B-207ENST00000415107 MAGOHP61326 146 aaKnown RBP11.35□□□□□ -0.59
ATG4B-207ENST00000415107 SKP1P63208 163 aa11.35□□□□□ -0.59
ATG4B-207ENST00000415107 MEF2AQ02078 507 aaPredicted RBP11.35□□□□□ -0.59
ATG4B-207ENST00000415107 HYAL2Q12891 473 aa11.35□□□□□ -0.59
ATG4B-207ENST00000415107 GPS2Q13227 327 aa11.35□□□□□ -0.59
ATG4B-207ENST00000415107 MPP2Q14168 576 aa11.35□□□□□ -0.59
ATG4B-207ENST00000415107 HKDC1Q2TB90 917 aa11.35□□□□□ -0.59
ATG4B-207ENST00000415107 CRTC2Q53ET0 693 aaPredicted RBP11.35□□□□□ -0.59
ATG4B-207ENST00000415107 C6orf15Q6UXA7 325 aaPredicted RBP11.35□□□□□ -0.59
ATG4B-207ENST00000415107 MED25Q71SY5 747 aa11.35□□□□□ -0.59
ATG4B-207ENST00000415107 TIPARPQ7Z3E1 657 aaKnown RBP11.35□□□□□ -0.59
ATG4B-207ENST00000415107 VN1R5Q7Z5H4 357 aa11.35□□□□□ -0.59
ATG4B-207ENST00000415107 C10orf107Q8IVU9 208 aa11.35□□□□□ -0.59
ATG4B-207ENST00000415107 OR7G3Q8NG95 312 aa11.35□□□□□ -0.59
ATG4B-207ENST00000415107 WDR20Q8TBZ3 569 aa11.35□□□□□ -0.59
ATG4B-207ENST00000415107 PPP4R1Q8TF05 950 aa11.35□□□□□ -0.59
ATG4B-207ENST00000415107 AGAP11Q8TF27 550 aa11.35□□□□□ -0.59
ATG4B-207ENST00000415107 ZNF473Q8WTR7 871 aaKnown RBP11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms