RNA–Protein interactions for RNA: ENST00000414978.5

MCF2-204, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene MCF2, Length 3,813 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-204ENST00000414978 Q6ZNX1 250 aa2.45□□□□□ -2.02
MCF2-204ENST00000414978 ZNF551Q7Z340 670 aaPredicted RBP2.45□□□□□ -2.02
MCF2-204ENST00000414978 SPATA6LQ8N4H0 392 aa2.45□□□□□ -2.02
MCF2-204ENST00000414978 CCDC148Q8NFR7 591 aa2.45□□□□□ -2.02
MCF2-204ENST00000414978 BEST2Q8NFU1 509 aa2.45□□□□□ -2.02
MCF2-204ENST00000414978 OR8J1Q8NGP2 316 aa2.45□□□□□ -2.02
MCF2-204ENST00000414978 OR4A16Q8NH70 328 aa2.45□□□□□ -2.02
MCF2-204ENST00000414978 DAZLQ92904 295 aaKnown RBP2.45□□□□□ -2.02
MCF2-204ENST00000414978 RIT1Q92963 219 aa2.45□□□□□ -2.02
MCF2-204ENST00000414978 CPNE1Q99829 537 aa2.45□□□□□ -2.02
MCF2-204ENST00000414978 C16orf70Q9BSU1 422 aa2.45□□□□□ -2.02
MCF2-204ENST00000414978 MTMR12Q9C0I1 747 aa2.45□□□□□ -2.02
MCF2-204ENST00000414978 RAB33BQ9H082 229 aa2.45□□□□□ -2.02
MCF2-204ENST00000414978 DDX47Q9H0S4 455 aaKnown RBP2.45□□□□□ -2.02
MCF2-204ENST00000414978 NAPBQ9H115 298 aa2.45□□□□□ -2.02
MCF2-204ENST00000414978 KCNMB3Q9NPA1 279 aa2.45□□□□□ -2.02
MCF2-204ENST00000414978 COL6A3P12111 3177 aa2.45□□□□□ -2.02
MCF2-204ENST00000414978 A0A096LPK6 155 aa2.45□□□□□ -2.02
MCF2-204ENST00000414978 A0A1W2PPK0 400 aa2.45□□□□□ -2.02
MCF2-204ENST00000414978 A0A1W2PRG0 241 aa2.45□□□□□ -2.02
MCF2-204ENST00000414978 ZNF716A6NP11 495 aa2.45□□□□□ -2.02
MCF2-204ENST00000414978 CCL24O00175 119 aa2.45□□□□□ -2.02
MCF2-204ENST00000414978 TLR4O00206 839 aa2.45□□□□□ -2.02
MCF2-204ENST00000414978 HSPB6O14558 160 aa2.45□□□□□ -2.02
MCF2-204ENST00000414978 HCRTR2O43614 444 aa2.45□□□□□ -2.02
MCF2-204ENST00000414978 ITM2AO43736 263 aa2.45□□□□□ -2.02
MCF2-204ENST00000414978 SSX4O60224 188 aa2.45□□□□□ -2.02
MCF2-204ENST00000414978 SAP30O75446 220 aa2.45□□□□□ -2.02
MCF2-204ENST00000414978 GJB5O95377 273 aa2.45□□□□□ -2.02
MCF2-204ENST00000414978 NUDT17P0C025 328 aa2.45□□□□□ -2.02
MCF2-204ENST00000414978 ZNF735P0CB33 412 aa2.45□□□□□ -2.02
MCF2-204ENST00000414978 SP9P0CG40 484 aa2.45□□□□□ -2.02
MCF2-204ENST00000414978 NR1D1P20393 614 aa2.45□□□□□ -2.02
MCF2-204ENST00000414978 ACAT1P24752 427 aaKnown RBP2.45□□□□□ -2.02
MCF2-204ENST00000414978 HRH2P25021 359 aa2.45□□□□□ -2.02
MCF2-204ENST00000414978 P2RX3P56373 397 aa2.45□□□□□ -2.02
MCF2-204ENST00000414978 ARF5P84085 180 aa2.45□□□□□ -2.02
MCF2-204ENST00000414978 ENPP2Q13822 863 aa2.45□□□□□ -2.02
MCF2-204ENST00000414978 MXD4Q14582 209 aaPredicted RBP2.45□□□□□ -2.02
MCF2-204ENST00000414978 OASLQ15646 514 aaKnown RBP2.45□□□□□ -2.02
MCF2-204ENST00000414978 KRTAP21-3Q3LHN1 58 aa2.45□□□□□ -2.02
MCF2-204ENST00000414978 SGO1Q5FBB7 561 aa2.45□□□□□ -2.02
MCF2-204ENST00000414978 C6orf141Q5SZD1 244 aa2.45□□□□□ -2.02
MCF2-204ENST00000414978 AADACL2Q6P093 401 aa2.45□□□□□ -2.02
MCF2-204ENST00000414978 TMEM26Q6ZUK4 368 aa2.45□□□□□ -2.02
MCF2-204ENST00000414978 POLNQ7Z5Q5 900 aa2.45□□□□□ -2.02
MCF2-204ENST00000414978 TMPRSS11BQ86T26 416 aa2.45□□□□□ -2.02
MCF2-204ENST00000414978 NIPA2Q8N8Q9 360 aa2.45□□□□□ -2.02
MCF2-204ENST00000414978 RP9Q8TA86 221 aaKnown RBP2.45□□□□□ -2.02
MCF2-204ENST00000414978 DQX1Q8TE96 717 aaKnown RBP2.45□□□□□ -2.02
MCF2-204ENST00000414978 TRPC4APQ8TEL6 797 aa2.45□□□□□ -2.02
MCF2-204ENST00000414978 C8orf49Q96NF6 230 aa2.45□□□□□ -2.02
MCF2-204ENST00000414978 FSD1LQ9BXM9 530 aa2.45□□□□□ -2.02
MCF2-204ENST00000414978 POLR1EQ9GZS1 481 aaKnown RBP2.45□□□□□ -2.02
MCF2-204ENST00000414978 CARD9Q9H257 536 aa2.45□□□□□ -2.02
MCF2-204ENST00000414978 MMP27Q9H306 513 aa2.45□□□□□ -2.02
MCF2-204ENST00000414978 MOV10Q9HCE1 1003 aaKnown RBP2.45□□□□□ -2.02
MCF2-204ENST00000414978 TRIM10Q9UDY6 481 aa2.45□□□□□ -2.02
MCF2-204ENST00000414978 RUVBL2Q9Y230 463 aaKnown RBP2.45□□□□□ -2.02
MCF2-204ENST00000414978 TTC28Q96AY4 2481 aa2.45□□□□□ -2.02
MCF2-204ENST00000414978 TET1Q8NFU7 2136 aa2.44□□□□□ -2.02
MCF2-204ENST00000414978 DENND3A2RUS2 1198 aa2.44□□□□□ -2.02
MCF2-204ENST00000414978 PRSS46E5RG02 174 aa2.44□□□□□ -2.02
MCF2-204ENST00000414978 PRAMEF11O60813 436 aa2.44□□□□□ -2.02
MCF2-204ENST00000414978 PRAF2O60831 178 aa2.44□□□□□ -2.02
MCF2-204ENST00000414978 BMP10O95393 424 aa2.44□□□□□ -2.02
MCF2-204ENST00000414978 HIST1H2ABP04908 130 aa2.44□□□□□ -2.02
MCF2-204ENST00000414978 HIST1H2ADP20671 130 aa2.44□□□□□ -2.02
MCF2-204ENST00000414978 TUBG1P23258 451 aa2.44□□□□□ -2.02
MCF2-204ENST00000414978 TNFSF8P32971 234 aa2.44□□□□□ -2.02
MCF2-204ENST00000414978 GABRB2P47870 512 aa2.44□□□□□ -2.02
MCF2-204ENST00000414978 SOX2P48431 317 aa2.44□□□□□ -2.02
MCF2-204ENST00000414978 GSTO1P78417 241 aa2.44□□□□□ -2.02
MCF2-204ENST00000414978 CRYZQ08257 329 aaKnown RBP2.44□□□□□ -2.02
MCF2-204ENST00000414978 HYAL1Q12794 435 aa2.44□□□□□ -2.02
MCF2-204ENST00000414978 HSPB3Q12988 150 aa2.44□□□□□ -2.02
MCF2-204ENST00000414978 SPP2Q13103 211 aa2.44□□□□□ -2.02
MCF2-204ENST00000414978 TYW3Q6IPR3 259 aaKnown RBP2.44□□□□□ -2.02
MCF2-204ENST00000414978 IL17RELQ6ZVW7 336 aa2.44□□□□□ -2.02
MCF2-204ENST00000414978 HIST3H2AQ7L7L0 130 aa2.44□□□□□ -2.02
MCF2-204ENST00000414978 SFTPA1Q8IWL2 248 aa2.44□□□□□ -2.02
MCF2-204ENST00000414978 GBGT1Q8N5D6 347 aa2.44□□□□□ -2.02
MCF2-204ENST00000414978 KLHDC1Q8N7A1 406 aa2.44□□□□□ -2.02
MCF2-204ENST00000414978 SLC38A5Q8WUX1 472 aa2.44□□□□□ -2.02
MCF2-204ENST00000414978 BOD1Q96IK1 185 aa2.44□□□□□ -2.02
MCF2-204ENST00000414978 CNOT6LQ96LI5 555 aaKnown RBP2.44□□□□□ -2.02
MCF2-204ENST00000414978 FAM20AQ96MK3 541 aa2.44□□□□□ -2.02
MCF2-204ENST00000414978 QRFPRQ96P65 431 aa2.44□□□□□ -2.02
MCF2-204ENST00000414978 SECISBP2Q96T21 854 aaKnown RBP2.44□□□□□ -2.02
MCF2-204ENST00000414978 TBCDQ9BTW9 1192 aa2.44□□□□□ -2.02
MCF2-204ENST00000414978 ZCCHC4Q9H5U6 513 aa2.44□□□□□ -2.02
MCF2-204ENST00000414978 TRPC7Q9HCX4 862 aa2.44□□□□□ -2.02
MCF2-204ENST00000414978 TUBG2Q9NRH3 451 aa2.44□□□□□ -2.02
MCF2-204ENST00000414978 ZCCHC3Q9NUD5 404 aaKnown RBP2.44□□□□□ -2.02
MCF2-204ENST00000414978 ANGPTL2Q9UKU9 493 aa2.44□□□□□ -2.02
MCF2-204ENST00000414978 JRKLQ9Y4A0 524 aa2.44□□□□□ -2.02
MCF2-204ENST00000414978 ATG4BQ9Y4P1 393 aa2.44□□□□□ -2.02
MCF2-204ENST00000414978 INSL5Q9Y5Q6 135 aa2.44□□□□□ -2.02
MCF2-204ENST00000414978 NCOR1O75376 2440 aa2.44□□□□□ -2.02
MCF2-204ENST00000414978 BAHCC1Q9P281 2608 aa2.44□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms