RNA–Protein interactions for RNA: ENST00000414879.5

PTPRF-205, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 2

Gene PTPRF, Length 4,836 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-205ENST00000414879 OAS3Q9Y6K5 1087 aaKnown RBP11.58□□□□□ -0.56
PTPRF-205ENST00000414879 SLC30A4O14863 429 aa11.57□□□□□ -0.56
PTPRF-205ENST00000414879 H1F0P07305 194 aaKnown RBP11.57□□□□□ -0.56
PTPRF-205ENST00000414879 FGF4P08620 206 aa11.57□□□□□ -0.56
PTPRF-205ENST00000414879 VIPR2P41587 438 aa11.57□□□□□ -0.56
PTPRF-205ENST00000414879 RAB14P61106 215 aa11.57□□□□□ -0.56
PTPRF-205ENST00000414879 GK3PQ14409 553 aa11.57□□□□□ -0.56
PTPRF-205ENST00000414879 ANGPT1Q15389 498 aa11.57□□□□□ -0.56
PTPRF-205ENST00000414879 ARHGAP40Q5TG30 622 aa11.57□□□□□ -0.56
PTPRF-205ENST00000414879 ZNF57Q68EA5 555 aaPredicted RBP11.57□□□□□ -0.56
PTPRF-205ENST00000414879 REEP3Q6NUK4 255 aa11.57□□□□□ -0.56
PTPRF-205ENST00000414879 RPTNQ6XPR3 784 aa11.57□□□□□ -0.56
PTPRF-205ENST00000414879 PAQR9Q6ZVX9 377 aa11.57□□□□□ -0.56
PTPRF-205ENST00000414879 PPP1R14AQ96A00 147 aa11.57□□□□□ -0.56
PTPRF-205ENST00000414879 COQ6Q9Y2Z9 468 aa11.57□□□□□ -0.56
PTPRF-205ENST00000414879 ELOA3DA6NLF2 546 aaPredicted RBP11.57□□□□□ -0.56
PTPRF-205ENST00000414879 SCDO00767 359 aa11.57□□□□□ -0.56
PTPRF-205ENST00000414879 RENP00797 406 aa11.57□□□□□ -0.56
PTPRF-205ENST00000414879 KCNA5P22460 613 aa11.57□□□□□ -0.56
PTPRF-205ENST00000414879 IL12AP29459 219 aa11.57□□□□□ -0.56
PTPRF-205ENST00000414879 ECHS1P30084 290 aa11.57□□□□□ -0.56
PTPRF-205ENST00000414879 ARFIP1P53367 373 aa11.57□□□□□ -0.56
PTPRF-205ENST00000414879 OLIG2Q13516 323 aa11.57□□□□□ -0.56
PTPRF-205ENST00000414879 MED22Q15528 200 aa11.57□□□□□ -0.56
PTPRF-205ENST00000414879 ELOA3BQ3SY89 546 aa11.57□□□□□ -0.56
PTPRF-205ENST00000414879 PAMR1Q6UXH9 720 aa11.57□□□□□ -0.56
PTPRF-205ENST00000414879 AMIGO1Q86WK6 493 aa11.57□□□□□ -0.56
PTPRF-205ENST00000414879 PLPP6Q8IY26 295 aa11.57□□□□□ -0.56
PTPRF-205ENST00000414879 TTC9BQ8N6N2 239 aa11.57□□□□□ -0.56
PTPRF-205ENST00000414879 ELOA3Q8NG57 546 aa11.57□□□□□ -0.56
PTPRF-205ENST00000414879 COL21A1Q96P44 957 aa11.57□□□□□ -0.56
PTPRF-205ENST00000414879 AIG1Q9NVV5 245 aa11.57□□□□□ -0.56
PTPRF-205ENST00000414879 PDE10AQ9Y233 779 aa11.57□□□□□ -0.56
PTPRF-205ENST00000414879 U3KQV3 271 aa11.57□□□□□ -0.56
PTPRF-205ENST00000414879 REM1O75628 298 aa11.57□□□□□ -0.56
PTPRF-205ENST00000414879 IL4RP24394 825 aa11.57□□□□□ -0.56
PTPRF-205ENST00000414879 CDKL1Q00532 357 aa11.57□□□□□ -0.56
PTPRF-205ENST00000414879 RPL6Q02878 288 aaKnown RBP11.57□□□□□ -0.56
PTPRF-205ENST00000414879 SNTA1Q13424 505 aa11.57□□□□□ -0.56
PTPRF-205ENST00000414879 ZNF846Q147U1 533 aa11.57□□□□□ -0.56
PTPRF-205ENST00000414879 LPCAT4Q643R3 524 aa11.57□□□□□ -0.56
PTPRF-205ENST00000414879 FAM91A1Q658Y4 838 aa11.57□□□□□ -0.56
PTPRF-205ENST00000414879 TNFAIP8L2Q6P589 184 aaPredicted RBP11.57□□□□□ -0.56
PTPRF-205ENST00000414879 PLXDC1Q8IUK5 500 aa11.57□□□□□ -0.56
PTPRF-205ENST00000414879 RASGRP3Q8IV61 690 aa11.57□□□□□ -0.56
PTPRF-205ENST00000414879 PLD6Q8N2A8 252 aaKnown RBP11.57□□□□□ -0.56
PTPRF-205ENST00000414879 LRTOMTQ8WZ04 291 aa11.57□□□□□ -0.56
PTPRF-205ENST00000414879 PDLIM5Q96HC4 596 aaKnown RBP11.57□□□□□ -0.56
PTPRF-205ENST00000414879 PYURFQ96I23 114 aa11.57□□□□□ -0.56
PTPRF-205ENST00000414879 G6PC3Q9BUM1 346 aa11.57□□□□□ -0.56
PTPRF-205ENST00000414879 SLC46A2Q9BY10 475 aa11.57□□□□□ -0.56
PTPRF-205ENST00000414879 ACSS2Q9NR19 701 aa11.57□□□□□ -0.56
PTPRF-205ENST00000414879 CYP8B1Q9UNU6 501 aa11.57□□□□□ -0.56
PTPRF-205ENST00000414879 DLGAP4Q9Y2H0 992 aa11.57□□□□□ -0.56
PTPRF-205ENST00000414879 IGLON5A6NGN9 336 aa11.57□□□□□ -0.56
PTPRF-205ENST00000414879 SDHDO14521 159 aa11.57□□□□□ -0.56
PTPRF-205ENST00000414879 TOR1BO14657 336 aa11.57□□□□□ -0.56
PTPRF-205ENST00000414879 SERPINA3P01011 423 aa11.57□□□□□ -0.56
PTPRF-205ENST00000414879 ENPP2Q13822 863 aa11.57□□□□□ -0.56
PTPRF-205ENST00000414879 KHDC1Q4VXA5 237 aaKnown RBP11.57□□□□□ -0.56
PTPRF-205ENST00000414879 TMEM198Q66K66 360 aa11.57□□□□□ -0.56
PTPRF-205ENST00000414879 TICAM1Q8IUC6 712 aa11.57□□□□□ -0.56
PTPRF-205ENST00000414879 ZNF784Q8NCA9 323 aaPredicted RBP11.57□□□□□ -0.56
PTPRF-205ENST00000414879 SHKBP1Q8TBC3 707 aa11.57□□□□□ -0.56
PTPRF-205ENST00000414879 NODALQ96S42 347 aa11.57□□□□□ -0.56
PTPRF-205ENST00000414879 DCUN1D5Q9BTE7 237 aa11.57□□□□□ -0.56
PTPRF-205ENST00000414879 SPRTNQ9H040 489 aaPredicted RBP11.57□□□□□ -0.56
PTPRF-205ENST00000414879 KATNBL1Q9H079 304 aa11.57□□□□□ -0.56
PTPRF-205ENST00000414879 TAS2R9Q9NYW1 312 aa11.57□□□□□ -0.56
PTPRF-205ENST00000414879 DAPK2Q9UIK4 370 aa11.57□□□□□ -0.56
PTPRF-205ENST00000414879 HS3ST2Q9Y278 367 aa11.57□□□□□ -0.56
PTPRF-205ENST00000414879 IRAK3Q9Y616 596 aa11.57□□□□□ -0.56
PTPRF-205ENST00000414879 FOCADQ5VW36 1801 aa11.56□□□□□ -0.56
PTPRF-205ENST00000414879 OR1I1O60431 355 aa11.56□□□□□ -0.56
PTPRF-205ENST00000414879 C9P02748 559 aa11.56□□□□□ -0.56
PTPRF-205ENST00000414879 RPL10P27635 214 aaKnown RBP11.56□□□□□ -0.56
PTPRF-205ENST00000414879 GKP32189 559 aa11.56□□□□□ -0.56
PTPRF-205ENST00000414879 OR52E8Q6IFG1 317 aa11.56□□□□□ -0.56
PTPRF-205ENST00000414879 ZNF550Q7Z398 422 aa11.56□□□□□ -0.56
PTPRF-205ENST00000414879 HDDC2Q7Z4H3 204 aa11.56□□□□□ -0.56
PTPRF-205ENST00000414879 ARFGAP1Q8N6T3 406 aa11.56□□□□□ -0.56
PTPRF-205ENST00000414879 OR10G2Q8NGC3 310 aa11.56□□□□□ -0.56
PTPRF-205ENST00000414879 KLHL6Q8WZ60 621 aa11.56□□□□□ -0.56
PTPRF-205ENST00000414879 BRF2Q9HAW0 419 aa11.56□□□□□ -0.56
PTPRF-205ENST00000414879 TM9SF3Q9HD45 589 aa11.56□□□□□ -0.56
PTPRF-205ENST00000414879 FAM53CQ9NYF3 392 aa11.56□□□□□ -0.56
PTPRF-205ENST00000414879 BTBD3Q9Y2F9 522 aa11.56□□□□□ -0.56
PTPRF-205ENST00000414879 ARHGEF33A8MVX0 844 aa11.56□□□□□ -0.56
PTPRF-205ENST00000414879 NOBOXO60393 691 aa11.56□□□□□ -0.56
PTPRF-205ENST00000414879 CXCL10P02778 98 aa11.56□□□□□ -0.56
PTPRF-205ENST00000414879 MYBPC1Q00872 1141 aa11.56□□□□□ -0.56
PTPRF-205ENST00000414879 CRELD1Q96HD1 420 aa11.56□□□□□ -0.56
PTPRF-205ENST00000414879 EVA1AQ9H8M9 152 aa11.56□□□□□ -0.56
PTPRF-205ENST00000414879 GMEB2Q9UKD1 530 aa11.56□□□□□ -0.56
PTPRF-205ENST00000414879 TESMINQ9Y4I5 508 aa11.56□□□□□ -0.56
PTPRF-205ENST00000414879 RNH1P13489 461 aaKnown RBP11.56□□□□□ -0.56
PTPRF-205ENST00000414879 ATF6P18850 670 aa11.56□□□□□ -0.56
PTPRF-205ENST00000414879 HTR1EP28566 365 aa11.56□□□□□ -0.56
PTPRF-205ENST00000414879 FAUP35544 74 aaKnown RBP11.56□□□□□ -0.56
PTPRF-205ENST00000414879 EIF2DP41214 584 aaKnown RBP11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms