RNA–Protein interactions for RNA: ENST00000413987.1

SNHG3-201, Transcript of small nucleolar RNA host gene 3, humanhuman

TSL 1 (best)

Gene SNHG3, Length 2,201 nt, Biotype retained intron, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG3-201ENST00000413987 ATP6V0D1P61421 351 aa9.08□□□□□ -0.96
SNHG3-201ENST00000413987 OCA2Q04671 838 aa9.08□□□□□ -0.96
SNHG3-201ENST00000413987 STX5Q13190 355 aa9.08□□□□□ -0.96
SNHG3-201ENST00000413987 MMRN1Q13201 1228 aa9.08□□□□□ -0.96
SNHG3-201ENST00000413987 GAMTQ14353 236 aa9.08□□□□□ -0.96
SNHG3-201ENST00000413987 PDK2Q15119 407 aa9.08□□□□□ -0.96
SNHG3-201ENST00000413987 KCNJ8Q15842 424 aa9.08□□□□□ -0.96
SNHG3-201ENST00000413987 CPEB4Q17RY0 729 aaKnown RBP eCLIP9.08□□□□□ -0.96
SNHG3-201ENST00000413987 MTX3Q5HYI7 312 aa9.08□□□□□ -0.96
SNHG3-201ENST00000413987 PPM1LQ5SGD2 360 aa9.08□□□□□ -0.96
SNHG3-201ENST00000413987 AGAP7PQ5VUJ5 663 aa9.08□□□□□ -0.96
SNHG3-201ENST00000413987 PLPP4Q5VZY2 271 aa9.08□□□□□ -0.96
SNHG3-201ENST00000413987 TMEM26Q6ZUK4 368 aa9.08□□□□□ -0.96
SNHG3-201ENST00000413987 VASH1Q7L8A9 365 aaPredicted RBP9.08□□□□□ -0.96
SNHG3-201ENST00000413987 KANSL1Q7Z3B3 1105 aa9.08□□□□□ -0.96
SNHG3-201ENST00000413987 PYROXD2Q8N2H3 581 aa9.08□□□□□ -0.96
SNHG3-201ENST00000413987 KDM1BQ8NB78 822 aa9.08□□□□□ -0.96
SNHG3-201ENST00000413987 BHLHE23Q8NDY6 225 aa9.08□□□□□ -0.96
SNHG3-201ENST00000413987 PPWD1Q96BP3 646 aaKnown RBP9.08□□□□□ -0.96
SNHG3-201ENST00000413987 PTERQ96BW5 349 aa9.08□□□□□ -0.96
SNHG3-201ENST00000413987 MTFMTQ96DP5 389 aaKnown RBP9.08□□□□□ -0.96
SNHG3-201ENST00000413987 NEU1Q99519 415 aa9.08□□□□□ -0.96
SNHG3-201ENST00000413987 ZBTB18Q99592 522 aa9.08□□□□□ -0.96
SNHG3-201ENST00000413987 CIB1Q99828 191 aa9.08□□□□□ -0.96
SNHG3-201ENST00000413987 POLR1EQ9GZS1 481 aaKnown RBP9.08□□□□□ -0.96
SNHG3-201ENST00000413987 RAD21L1Q9H4I0 556 aa9.08□□□□□ -0.96
SNHG3-201ENST00000413987 EXO5Q9H790 373 aa9.08□□□□□ -0.96
SNHG3-201ENST00000413987 RMND5AQ9H871 391 aa9.08□□□□□ -0.96
SNHG3-201ENST00000413987 ZMAT4Q9H898 229 aa9.08□□□□□ -0.96
SNHG3-201ENST00000413987 EVA1AQ9H8M9 152 aa9.08□□□□□ -0.96
SNHG3-201ENST00000413987 MRM3Q9HC36 420 aaKnown RBP9.08□□□□□ -0.96
SNHG3-201ENST00000413987 MOV10Q9HCE1 1003 aaKnown RBP9.08□□□□□ -0.96
SNHG3-201ENST00000413987 PIGVQ9NUD9 493 aa9.08□□□□□ -0.96
SNHG3-201ENST00000413987 STAU2Q9NUL3 570 aaKnown RBP eCLIP9.08□□□□□ -0.96
SNHG3-201ENST00000413987 TMEM140Q9NV12 185 aa9.08□□□□□ -0.96
SNHG3-201ENST00000413987 ARMC1Q9NVT9 282 aa9.08□□□□□ -0.96
SNHG3-201ENST00000413987 USP18Q9UMW8 372 aa9.08□□□□□ -0.96
SNHG3-201ENST00000413987 CDYLQ9Y232 598 aa9.08□□□□□ -0.96
SNHG3-201ENST00000413987 YBX2Q9Y2T7 364 aaKnown RBP9.08□□□□□ -0.96
SNHG3-201ENST00000413987 STRAPQ9Y3F4 350 aaKnown RBP9.08□□□□□ -0.96
SNHG3-201ENST00000413987 C1orf232A0A0U1RR37 186 aa9.08□□□□□ -0.96
SNHG3-201ENST00000413987 CLCA1A8K7I4 914 aa9.08□□□□□ -0.96
SNHG3-201ENST00000413987 H3BUI4 141 aa9.08□□□□□ -0.96
SNHG3-201ENST00000413987 J3QRK9 145 aa9.08□□□□□ -0.96
SNHG3-201ENST00000413987 M0QYT0 321 aa9.08□□□□□ -0.96
SNHG3-201ENST00000413987 HAT1O14929 419 aa9.08□□□□□ -0.96
SNHG3-201ENST00000413987 PRKCGP05129 697 aa9.08□□□□□ -0.96
SNHG3-201ENST00000413987 MPOP05164 745 aa9.08□□□□□ -0.96
SNHG3-201ENST00000413987 SPARCP09486 303 aa9.08□□□□□ -0.96
SNHG3-201ENST00000413987 APEHP13798 732 aaKnown RBP9.08□□□□□ -0.96
SNHG3-201ENST00000413987 SELLP14151 372 aa9.08□□□□□ -0.96
SNHG3-201ENST00000413987 POLR2EP19388 210 aaKnown RBP9.08□□□□□ -0.96
SNHG3-201ENST00000413987 PSME3P61289 254 aa9.08□□□□□ -0.96
SNHG3-201ENST00000413987 PRKCQQ04759 706 aa9.08□□□□□ -0.96
SNHG3-201ENST00000413987 MERTKQ12866 999 aa9.08□□□□□ -0.96
SNHG3-201ENST00000413987 SLC10A2Q12908 348 aaPredicted RBP9.08□□□□□ -0.96
SNHG3-201ENST00000413987 BSPRYQ5W0U4 402 aa9.08□□□□□ -0.96
SNHG3-201ENST00000413987 SLC8B1Q6J4K2 584 aa9.08□□□□□ -0.96
SNHG3-201ENST00000413987 TMEM214Q6NUQ4 689 aaKnown RBP9.08□□□□□ -0.96
SNHG3-201ENST00000413987 GALNT18Q6P9A2 607 aa9.08□□□□□ -0.96
SNHG3-201ENST00000413987 CHSY3Q70JA7 882 aa9.08□□□□□ -0.96
SNHG3-201ENST00000413987 SCD5Q86SK9 330 aa9.08□□□□□ -0.96
SNHG3-201ENST00000413987 IGFN1Q86VF2 1251 aa9.08□□□□□ -0.96
SNHG3-201ENST00000413987 AMZ2Q86W34 360 aa9.08□□□□□ -0.96
SNHG3-201ENST00000413987 CDKL3Q8IVW4 592 aaPredicted RBP9.08□□□□□ -0.96
SNHG3-201ENST00000413987 RNF148Q8N7C7 305 aa9.08□□□□□ -0.96
SNHG3-201ENST00000413987 RCBTB1Q8NDN9 531 aa9.08□□□□□ -0.96
SNHG3-201ENST00000413987 PSMA8Q8TAA3 256 aa9.08□□□□□ -0.96
SNHG3-201ENST00000413987 MAPK15Q8TD08 544 aa9.08□□□□□ -0.96
SNHG3-201ENST00000413987 DUSP19Q8WTR2 217 aa9.08□□□□□ -0.96
SNHG3-201ENST00000413987 RAB2BQ8WUD1 216 aa9.08□□□□□ -0.96
SNHG3-201ENST00000413987 LIPHQ8WWY8 451 aa9.08□□□□□ -0.96
SNHG3-201ENST00000413987 S100ZQ8WXG8 99 aa9.08□□□□□ -0.96
SNHG3-201ENST00000413987 FBXL8Q96CD0 374 aa9.08□□□□□ -0.96
SNHG3-201ENST00000413987 TMA16Q96EY4 203 aaKnown RBP9.08□□□□□ -0.96
SNHG3-201ENST00000413987 FAM71F1Q96KD3 344 aaPredicted RBP9.08□□□□□ -0.96
SNHG3-201ENST00000413987 SECISBP2Q96T21 854 aaKnown RBP9.08□□□□□ -0.96
SNHG3-201ENST00000413987 CNPY3Q9BT09 278 aa9.08□□□□□ -0.96
SNHG3-201ENST00000413987 NAT9Q9BTE0 207 aa9.08□□□□□ -0.96
SNHG3-201ENST00000413987 ADI1Q9BV57 179 aa9.08□□□□□ -0.96
SNHG3-201ENST00000413987 NDEL1Q9GZM8 345 aa9.08□□□□□ -0.96
SNHG3-201ENST00000413987 SLC26A1Q9H2B4 701 aa9.08□□□□□ -0.96
SNHG3-201ENST00000413987 NOL11Q9H8H0 719 aaKnown RBP9.08□□□□□ -0.96
SNHG3-201ENST00000413987 GPN2Q9H9Y4 310 aaPredicted RBP9.08□□□□□ -0.96
SNHG3-201ENST00000413987 HMG20AQ9NP66 347 aa9.08□□□□□ -0.96
SNHG3-201ENST00000413987 PCDHB16Q9NRJ7 776 aa9.08□□□□□ -0.96
SNHG3-201ENST00000413987 DDX28Q9NUL7 540 aaKnown RBP9.08□□□□□ -0.96
SNHG3-201ENST00000413987 IL37Q9NZH6 218 aa9.08□□□□□ -0.96
SNHG3-201ENST00000413987 ATXN7L1Q9ULK2 861 aaPredicted RBP9.08□□□□□ -0.96
SNHG3-201ENST00000413987 COLQQ9Y215 455 aaPredicted RBP9.08□□□□□ -0.96
SNHG3-201ENST00000413987 IFT52Q9Y366 437 aa9.08□□□□□ -0.96
SNHG3-201ENST00000413987 SNX10Q9Y5X0 201 aa9.08□□□□□ -0.96
SNHG3-201ENST00000413987 TRIOO75962 3097 aa9.08□□□□□ -0.96
SNHG3-201ENST00000413987 PATJQ8NI35 1801 aa9.08□□□□□ -0.96
SNHG3-201ENST00000413987 MYO1GB0I1T2 1018 aa9.07□□□□□ -0.96
SNHG3-201ENST00000413987 CLDN25C9JDP6 229 aa9.07□□□□□ -0.96
SNHG3-201ENST00000413987 H7C4K7 107 aa9.07□□□□□ -0.96
SNHG3-201ENST00000413987 B3GALT4O96024 378 aa9.07□□□□□ -0.96
SNHG3-201ENST00000413987 MT-ND5P03915 603 aa9.07□□□□□ -0.96
SNHG3-201ENST00000413987 SCG5P05408 212 aa9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms