RNA–Protein interactions for RNA: ENST00000413872.6

PHRF1-202, Transcript of PHD and ring finger domains 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PHRF1, Length 5,224 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-202ENST00000413872 A0A1W2PQ72 361 aa16.73■□□□□ 0.27
PHRF1-202ENST00000413872 DAPL1A0PJW8 107 aa16.73■□□□□ 0.27
PHRF1-202ENST00000413872 CPSF4LA6NMK7 179 aaKnown RBP16.73■□□□□ 0.27
PHRF1-202ENST00000413872 JUNDP17535 347 aa16.73■□□□□ 0.27
PHRF1-202ENST00000413872 OR2T5Q6IEZ7 315 aa16.73■□□□□ 0.27
PHRF1-202ENST00000413872 OR2T29Q8NH02 315 aa16.73■□□□□ 0.27
PHRF1-202ENST00000413872 UFD1Q92890 307 aa16.73■□□□□ 0.27
PHRF1-202ENST00000413872 LRCH3Q96II8 777 aa16.73■□□□□ 0.27
PHRF1-202ENST00000413872 METTL7AQ9H8H3 244 aa16.73■□□□□ 0.27
PHRF1-202ENST00000413872 ST6GALNAC1Q9NSC7 600 aaPredicted RBP16.73■□□□□ 0.27
PHRF1-202ENST00000413872 PLAGL1Q9UM63 463 aa16.73■□□□□ 0.27
PHRF1-202ENST00000413872 IDH3BO43837 385 aa16.73■□□□□ 0.27
PHRF1-202ENST00000413872 FOSL2P15408 326 aa16.73■□□□□ 0.27
PHRF1-202ENST00000413872 AP3S2P59780 193 aa16.73■□□□□ 0.27
PHRF1-202ENST00000413872 CREB5Q02930 508 aa16.73■□□□□ 0.27
PHRF1-202ENST00000413872 P2RY8Q86VZ1 359 aa16.73■□□□□ 0.27
PHRF1-202ENST00000413872 SLC25A36Q96CQ1 311 aa16.73■□□□□ 0.27
PHRF1-202ENST00000413872 ACTR3BQ9P1U1 418 aa16.73■□□□□ 0.27
PHRF1-202ENST00000413872 RIMKLBQ9ULI2 386 aa16.73■□□□□ 0.27
PHRF1-202ENST00000413872 CHD4Q14839 1912 aa16.72■□□□□ 0.27
PHRF1-202ENST00000413872 H7BY64 318 aa16.72■□□□□ 0.27
PHRF1-202ENST00000413872 S1PR4O95977 384 aa16.72■□□□□ 0.27
PHRF1-202ENST00000413872 DHFRP00374 187 aa16.72■□□□□ 0.27
PHRF1-202ENST00000413872 HEXBP07686 556 aa16.72■□□□□ 0.27
PHRF1-202ENST00000413872 CHRM1P11229 460 aaPredicted RBP16.72■□□□□ 0.27
PHRF1-202ENST00000413872 GP1BBP13224 206 aa16.72■□□□□ 0.27
PHRF1-202ENST00000413872 TCEA1P23193 301 aaKnown RBP16.72■□□□□ 0.27
PHRF1-202ENST00000413872 UNC5DQ6UXZ4 953 aa16.72■□□□□ 0.27
PHRF1-202ENST00000413872 PJA1Q8NG27 643 aa16.72■□□□□ 0.27
PHRF1-202ENST00000413872 OR52E4Q8NGH9 312 aa16.72■□□□□ 0.27
PHRF1-202ENST00000413872 ZSWIM3Q96MP5 696 aa16.72■□□□□ 0.27
PHRF1-202ENST00000413872 PRAP1Q96NZ9 151 aa16.72■□□□□ 0.27
PHRF1-202ENST00000413872 C1orf21Q9H246 121 aa16.72■□□□□ 0.27
PHRF1-202ENST00000413872 SLC35C2Q9NQQ7 365 aa16.72■□□□□ 0.27
PHRF1-202ENST00000413872 PSAT1Q9Y617 370 aa16.72■□□□□ 0.27
PHRF1-202ENST00000413872 TMEM233B4DJY2 109 aa16.72■□□□□ 0.27
PHRF1-202ENST00000413872 CD1DP15813 335 aa16.72■□□□□ 0.27
PHRF1-202ENST00000413872 CAMK1Q14012 370 aa16.72■□□□□ 0.27
PHRF1-202ENST00000413872 KIAA0319Q5VV43 1072 aa16.72■□□□□ 0.27
PHRF1-202ENST00000413872 SCRN2Q96FV2 425 aa16.72■□□□□ 0.27
PHRF1-202ENST00000413872 HERPUD2Q9BSE4 406 aa16.72■□□□□ 0.27
PHRF1-202ENST00000413872 COPS4Q9BT78 406 aa16.72■□□□□ 0.27
PHRF1-202ENST00000413872 PRTFDC1Q9NRG1 225 aa16.72■□□□□ 0.27
PHRF1-202ENST00000413872 TAS2R9Q9NYW1 312 aa16.72■□□□□ 0.27
PHRF1-202ENST00000413872 TMEM5Q9Y2B1 443 aa16.72■□□□□ 0.27
PHRF1-202ENST00000413872 PRODHO43272 600 aa16.72■□□□□ 0.27
PHRF1-202ENST00000413872 PEX2P28328 305 aa16.72■□□□□ 0.27
PHRF1-202ENST00000413872 KCNC1P48547 511 aa16.72■□□□□ 0.27
PHRF1-202ENST00000413872 SPINT3P49223 89 aa16.72■□□□□ 0.27
PHRF1-202ENST00000413872 UFM1P61960 85 aa16.72■□□□□ 0.27
PHRF1-202ENST00000413872 MPP7Q5T2T1 576 aa16.72■□□□□ 0.27
PHRF1-202ENST00000413872 PAMR1Q6UXH9 720 aa16.72■□□□□ 0.27
PHRF1-202ENST00000413872 PIGKQ92643 395 aa16.72■□□□□ 0.27
PHRF1-202ENST00000413872 KCNC2Q96PR1 638 aa16.72■□□□□ 0.27
PHRF1-202ENST00000413872 TMLHEQ9NVH6 421 aa16.72■□□□□ 0.27
PHRF1-202ENST00000413872 MKS1Q9NXB0 559 aa16.72■□□□□ 0.27
PHRF1-202ENST00000413872 VIRMAQ69YN4 1812 aaKnown RBP16.72■□□□□ 0.27
PHRF1-202ENST00000413872 IGLON5A6NGN9 336 aa16.72■□□□□ 0.27
PHRF1-202ENST00000413872 AHSA1O95433 338 aa16.72■□□□□ 0.27
PHRF1-202ENST00000413872 C9P02748 559 aa16.72■□□□□ 0.27
PHRF1-202ENST00000413872 ASGR2P07307 311 aa16.72■□□□□ 0.27
PHRF1-202ENST00000413872 SYPP08247 313 aa16.72■□□□□ 0.27
PHRF1-202ENST00000413872 RABIFP47224 123 aa16.72■□□□□ 0.27
PHRF1-202ENST00000413872 EIF2B2P49770 351 aaKnown RBP16.72■□□□□ 0.27
PHRF1-202ENST00000413872 GSK3BP49841 420 aa16.72■□□□□ 0.27
PHRF1-202ENST00000413872 TLR1Q15399 786 aa16.72■□□□□ 0.27
PHRF1-202ENST00000413872 KHDC1Q4VXA5 237 aaKnown RBP16.72■□□□□ 0.27
PHRF1-202ENST00000413872 ADNP2Q6IQ32 1131 aa16.72■□□□□ 0.27
PHRF1-202ENST00000413872 ZNF598Q86UK7 904 aaKnown RBP16.72■□□□□ 0.27
PHRF1-202ENST00000413872 TMEM25Q86YD3 366 aa16.72■□□□□ 0.27
PHRF1-202ENST00000413872 ADAMTS18Q8TE60 1221 aa16.72■□□□□ 0.27
PHRF1-202ENST00000413872 TAS2R7Q9NYW3 318 aa16.72■□□□□ 0.27
PHRF1-202ENST00000413872 KAT6AQ92794 2004 aa16.71■□□□□ 0.27
PHRF1-202ENST00000413872 WASHC1A8K0Z3 465 aa16.71■□□□□ 0.27
PHRF1-202ENST00000413872 A8MUI8 341 aa16.71■□□□□ 0.27
PHRF1-202ENST00000413872 WASH3PC4AMC7 463 aa16.71■□□□□ 0.27
PHRF1-202ENST00000413872 M0QX08 132 aa16.71■□□□□ 0.27
PHRF1-202ENST00000413872 NUDT1P36639 197 aa16.71■□□□□ 0.27
PHRF1-202ENST00000413872 PPP2R2BQ00005 443 aa16.71■□□□□ 0.27
PHRF1-202ENST00000413872 SMCO1Q147U7 214 aa16.71■□□□□ 0.27
PHRF1-202ENST00000413872 WASH2PQ6VEQ5 465 aa16.71■□□□□ 0.27
PHRF1-202ENST00000413872 RABEPKQ7Z6M1 372 aa16.71■□□□□ 0.27
PHRF1-202ENST00000413872 OR6K6Q8NGW6 343 aa16.71■□□□□ 0.27
PHRF1-202ENST00000413872 CASD1Q96PB1 797 aa16.71■□□□□ 0.27
PHRF1-202ENST00000413872 C17orf62Q9BQA9 187 aa16.71■□□□□ 0.27
PHRF1-202ENST00000413872 ASPNQ9BXN1 380 aa16.71■□□□□ 0.27
PHRF1-202ENST00000413872 WDR45Q9Y484 360 aa16.71■□□□□ 0.27
PHRF1-202ENST00000413872 PCDHGB5Q9Y5G0 923 aa16.71■□□□□ 0.27
PHRF1-202ENST00000413872 PCDHGA12O60330 932 aa16.71■□□□□ 0.27
PHRF1-202ENST00000413872 SEMA4FO95754 770 aa16.71■□□□□ 0.27
PHRF1-202ENST00000413872 LINGO3P0C6S8 592 aa16.71■□□□□ 0.27
PHRF1-202ENST00000413872 MATN1P21941 496 aa16.71■□□□□ 0.27
PHRF1-202ENST00000413872 MTTPP55157 894 aa16.71■□□□□ 0.27
PHRF1-202ENST00000413872 RPS15AP62244 130 aaKnown RBP16.71■□□□□ 0.27
PHRF1-202ENST00000413872 GANABQ14697 944 aaKnown RBP16.71■□□□□ 0.27
PHRF1-202ENST00000413872 TECRLQ5HYJ1 363 aa16.71■□□□□ 0.27
PHRF1-202ENST00000413872 SPANXN4Q5MJ08 99 aa16.71■□□□□ 0.27
PHRF1-202ENST00000413872 GPR153Q6NV75 609 aa16.71■□□□□ 0.27
PHRF1-202ENST00000413872 SLC2A7Q6PXP3 512 aa16.71■□□□□ 0.27
PHRF1-202ENST00000413872 LRRTM3Q86VH5 581 aa16.71■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms