RNA–Protein interactions for RNA: ENST00000409219.5

CHRNA1-203, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 3 BASIC

Gene CHRNA1, Length 1,466 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-203ENST00000409219 KIF2BQ8N4N8 673 aa12.06□□□□□ -0.48
CHRNA1-203ENST00000409219 OR5M3Q8NGP4 307 aa12.06□□□□□ -0.48
CHRNA1-203ENST00000409219 OR51Q1Q8NH59 317 aa12.06□□□□□ -0.48
CHRNA1-203ENST00000409219 C16orf52Q8NHV5 167 aa12.06□□□□□ -0.48
CHRNA1-203ENST00000409219 RERGQ96A58 199 aaPredicted RBP12.06□□□□□ -0.48
CHRNA1-203ENST00000409219 TMEM125Q96AQ2 219 aa12.06□□□□□ -0.48
CHRNA1-203ENST00000409219 LRRC45Q96CN5 670 aa12.06□□□□□ -0.48
CHRNA1-203ENST00000409219 ALS2CR12Q96Q35 445 aa12.06□□□□□ -0.48
CHRNA1-203ENST00000409219 DNAJC7Q99615 494 aa12.06□□□□□ -0.48
CHRNA1-203ENST00000409219 LPAR4Q99677 370 aa12.06□□□□□ -0.48
CHRNA1-203ENST00000409219 FAM118BQ9BPY3 351 aa12.06□□□□□ -0.48
CHRNA1-203ENST00000409219 ABHD10Q9NUJ1 306 aa12.06□□□□□ -0.48
CHRNA1-203ENST00000409219 HCN3Q9P1Z3 774 aa12.06□□□□□ -0.48
CHRNA1-203ENST00000409219 PCYOX1Q9UHG3 505 aa12.06□□□□□ -0.48
CHRNA1-203ENST00000409219 EDARQ9UNE0 448 aa12.06□□□□□ -0.48
CHRNA1-203ENST00000409219 KLF13Q9Y2Y9 288 aaPredicted RBP12.06□□□□□ -0.48
CHRNA1-203ENST00000409219 CDK2AP1O14519 115 aa12.05□□□□□ -0.48
CHRNA1-203ENST00000409219 STK10O94804 968 aaKnown RBP12.05□□□□□ -0.48
CHRNA1-203ENST00000409219 STATHP02808 62 aa12.05□□□□□ -0.48
CHRNA1-203ENST00000409219 CCDC175P0C221 793 aa12.05□□□□□ -0.48
CHRNA1-203ENST00000409219 RBP3P10745 1247 aa12.05□□□□□ -0.48
CHRNA1-203ENST00000409219 HOXC12P31275 282 aa12.05□□□□□ -0.48
CHRNA1-203ENST00000409219 SLC26A5P58743 744 aa12.05□□□□□ -0.48
CHRNA1-203ENST00000409219 NDUFA9Q16795 377 aa12.05□□□□□ -0.48
CHRNA1-203ENST00000409219 AFTPHQ6ULP2 937 aa12.05□□□□□ -0.48
CHRNA1-203ENST00000409219 ZNF534Q76KX8 674 aa12.05□□□□□ -0.48
CHRNA1-203ENST00000409219 PLD3Q8IV08 490 aa12.05□□□□□ -0.48
CHRNA1-203ENST00000409219 SULF2Q8IWU5 870 aa12.05□□□□□ -0.48
CHRNA1-203ENST00000409219 ACRBPQ8NEB7 543 aa12.05□□□□□ -0.48
CHRNA1-203ENST00000409219 GOT1L1Q8NHS2 421 aaPredicted RBP12.05□□□□□ -0.48
CHRNA1-203ENST00000409219 ELP5Q8TE02 316 aa12.05□□□□□ -0.48
CHRNA1-203ENST00000409219 SKA2Q8WVK7 121 aaPredicted RBP12.05□□□□□ -0.48
CHRNA1-203ENST00000409219 TSLPQ969D9 159 aa12.05□□□□□ -0.48
CHRNA1-203ENST00000409219 TTC1Q99614 292 aa12.05□□□□□ -0.48
CHRNA1-203ENST00000409219 SLC6A16Q9GZN6 736 aa12.05□□□□□ -0.48
CHRNA1-203ENST00000409219 LRRC40Q9H9A6 602 aa12.05□□□□□ -0.48
CHRNA1-203ENST00000409219 L2HGDHQ9H9P8 463 aa12.05□□□□□ -0.48
CHRNA1-203ENST00000409219 SLC2A6Q9UGQ3 507 aa12.05□□□□□ -0.48
CHRNA1-203ENST00000409219 TAC3Q9UHF0 121 aa12.05□□□□□ -0.48
CHRNA1-203ENST00000409219 MRFAP1Q9Y605 127 aa12.05□□□□□ -0.48
CHRNA1-203ENST00000409219 ATRQ13535 2644 aa12.05□□□□□ -0.48
CHRNA1-203ENST00000409219 TLN2Q9Y4G6 2542 aa12.04□□□□□ -0.48
CHRNA1-203ENST00000409219 ARHGEF33A8MVX0 844 aa12.04□□□□□ -0.48
CHRNA1-203ENST00000409219 TXNDC9O14530 226 aa12.04□□□□□ -0.48
CHRNA1-203ENST00000409219 HAT1O14929 419 aa12.04□□□□□ -0.48
CHRNA1-203ENST00000409219 PDE9AO76083 593 aa12.04□□□□□ -0.48
CHRNA1-203ENST00000409219 ATE1O95260 518 aa12.04□□□□□ -0.48
CHRNA1-203ENST00000409219 RAF1P04049 648 aa12.04□□□□□ -0.48
CHRNA1-203ENST00000409219 IL1RNP18510 177 aa12.04□□□□□ -0.48
CHRNA1-203ENST00000409219 CCNFP41002 786 aa12.04□□□□□ -0.48
CHRNA1-203ENST00000409219 EIF3EP60228 445 aaKnown RBP12.04□□□□□ -0.48
CHRNA1-203ENST00000409219 RHAGQ02094 409 aa12.04□□□□□ -0.48
CHRNA1-203ENST00000409219 ABRAXAS2Q15018 415 aa12.04□□□□□ -0.48
CHRNA1-203ENST00000409219 EEF1AKMT2Q5JPI9 291 aaKnown RBP12.04□□□□□ -0.48
CHRNA1-203ENST00000409219 ICE2Q659A1 982 aa12.04□□□□□ -0.48
CHRNA1-203ENST00000409219 RAD9BQ6WBX8 426 aa12.04□□□□□ -0.48
CHRNA1-203ENST00000409219 PCGF5Q86SE9 256 aa12.04□□□□□ -0.48
CHRNA1-203ENST00000409219 LIX1LQ8IVB5 337 aa12.04□□□□□ -0.48
CHRNA1-203ENST00000409219 RCOR2Q8IZ40 523 aa12.04□□□□□ -0.48
CHRNA1-203ENST00000409219 OR8K1Q8NGG5 319 aa12.04□□□□□ -0.48
CHRNA1-203ENST00000409219 OR52N2Q8NGI0 321 aa12.04□□□□□ -0.48
CHRNA1-203ENST00000409219 OR10Q1Q8NGQ4 319 aa12.04□□□□□ -0.48
CHRNA1-203ENST00000409219 RBCK1Q9BYM8 510 aa12.04□□□□□ -0.48
CHRNA1-203ENST00000409219 DMRT3Q9NQL9 472 aa12.04□□□□□ -0.48
CHRNA1-203ENST00000409219 CRIM1Q9NZV1 1036 aa12.04□□□□□ -0.48
CHRNA1-203ENST00000409219 A0A0G2JNJ9 132 aa12.03□□□□□ -0.48
CHRNA1-203ENST00000409219 A6NNC1 897 aa12.03□□□□□ -0.48
CHRNA1-203ENST00000409219 PEX1O43933 1283 aa12.03□□□□□ -0.48
CHRNA1-203ENST00000409219 METTL18O95568 372 aa12.03□□□□□ -0.48
CHRNA1-203ENST00000409219 PKMP14618 531 aaKnown RBP12.03□□□□□ -0.48
CHRNA1-203ENST00000409219 TRHRP34981 398 aaPredicted RBP12.03□□□□□ -0.48
CHRNA1-203ENST00000409219 RPA3P35244 121 aaPredicted RBP12.03□□□□□ -0.48
CHRNA1-203ENST00000409219 KIR2DL3P43628 341 aa12.03□□□□□ -0.48
CHRNA1-203ENST00000409219 ZFP36L2P47974 494 aaKnown RBP12.03□□□□□ -0.48
CHRNA1-203ENST00000409219 HLCSP50747 726 aa12.03□□□□□ -0.48
CHRNA1-203ENST00000409219 MLF1P58340 268 aa12.03□□□□□ -0.48
CHRNA1-203ENST00000409219 GPR85P60893 370 aa12.03□□□□□ -0.48
CHRNA1-203ENST00000409219 ACTN3Q08043 901 aaPredicted RBP12.03□□□□□ -0.48
CHRNA1-203ENST00000409219 NSDHLQ15738 373 aa12.03□□□□□ -0.48
CHRNA1-203ENST00000409219 CCDC181Q5TID7 509 aa12.03□□□□□ -0.48
CHRNA1-203ENST00000409219 DARS2Q6PI48 645 aaKnown RBP12.03□□□□□ -0.48
CHRNA1-203ENST00000409219 LDB1Q86U70 411 aaPredicted RBP12.03□□□□□ -0.48
CHRNA1-203ENST00000409219 ZFP62Q8NB50 900 aaPredicted RBP12.03□□□□□ -0.48
CHRNA1-203ENST00000409219 LRRN4CLQ8ND94 238 aa12.03□□□□□ -0.48
CHRNA1-203ENST00000409219 GSDMBQ8TAX9 411 aa12.03□□□□□ -0.48
CHRNA1-203ENST00000409219 SMPDL3AQ92484 453 aa12.03□□□□□ -0.48
CHRNA1-203ENST00000409219 ZNF592Q92610 1267 aa12.03□□□□□ -0.48
CHRNA1-203ENST00000409219 ZNF778Q96MU6 729 aa12.03□□□□□ -0.48
CHRNA1-203ENST00000409219 PNPLA3Q9NST1 481 aa12.03□□□□□ -0.48
CHRNA1-203ENST00000409219 Q9UFV3 132 aa12.03□□□□□ -0.48
CHRNA1-203ENST00000409219 TSR3Q9UJK0 312 aaKnown RBP12.03□□□□□ -0.48
CHRNA1-203ENST00000409219 FAM215AQ9Y5M1 114 aa12.03□□□□□ -0.48
CHRNA1-203ENST00000409219 NPIPA2E9PIF3 369 aa12.02□□□□□ -0.48
CHRNA1-203ENST00000409219 NPIPA3F8WFD2 350 aa12.02□□□□□ -0.48
CHRNA1-203ENST00000409219 KLRC4-KLRK1H3BQV0 150 aa12.02□□□□□ -0.48
CHRNA1-203ENST00000409219 SGK494L7N484 410 aa12.02□□□□□ -0.48
CHRNA1-203ENST00000409219 PRMT5O14744 637 aaPredicted RBP12.02□□□□□ -0.48
CHRNA1-203ENST00000409219 PJA2O43164 708 aa12.02□□□□□ -0.48
CHRNA1-203ENST00000409219 AKR1B10O60218 316 aa12.02□□□□□ -0.48
CHRNA1-203ENST00000409219 CDC123O75794 336 aaPredicted RBP12.02□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms