RNA–Protein interactions for RNA: ENST00000409025.5

USP39-202, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 5 BASIC

Gene USP39, Length 1,946 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-202ENST00000409025 PHACTR4Q8IZ21 702 aa18.2■□□□□ 0.5
USP39-202ENST00000409025 OR4K1Q8NGD4 311 aa18.2■□□□□ 0.5
USP39-202ENST00000409025 OR52E1Q8NGJ3 308 aa18.2■□□□□ 0.5
USP39-202ENST00000409025 WDR48Q8TAF3 677 aa18.2■□□□□ 0.5
USP39-202ENST00000409025 FAM110BQ8TC76 370 aa18.2■□□□□ 0.5
USP39-202ENST00000409025 MIEF2Q96C03 454 aa18.2■□□□□ 0.5
USP39-202ENST00000409025 PDXPQ96GD0 296 aa18.2■□□□□ 0.5
USP39-202ENST00000409025 AURKBQ96GD4 344 aaPredicted RBP18.2■□□□□ 0.5
USP39-202ENST00000409025 GORASP2Q9H8Y8 452 aa18.2■□□□□ 0.5
USP39-202ENST00000409025 AHSPQ9NZD4 102 aa18.2■□□□□ 0.5
USP39-202ENST00000409025 USP36Q9P275 1121 aaKnown RBP18.2■□□□□ 0.5
USP39-202ENST00000409025 EBF1Q9UH73 591 aa18.2■□□□□ 0.5
USP39-202ENST00000409025 PCDHB11Q9Y5F2 797 aa18.2■□□□□ 0.5
USP39-202ENST00000409025 COLEC10Q9Y6Z7 277 aa18.2■□□□□ 0.5
USP39-202ENST00000409025 XIRP2A4UGR9 3374 aa18.2■□□□□ 0.5
USP39-202ENST00000409025 EVPLLA8MZ36 301 aa18.19■□□□□ 0.5
USP39-202ENST00000409025 H7BY64 318 aa18.19■□□□□ 0.5
USP39-202ENST00000409025 PIM1P11309 404 aaPredicted RBP18.19■□□□□ 0.5
USP39-202ENST00000409025 BMP2P12643 396 aa18.19■□□□□ 0.5
USP39-202ENST00000409025 RD3Q7Z3Z2 195 aa18.19■□□□□ 0.5
USP39-202ENST00000409025 MICU2Q8IYU8 434 aa18.19■□□□□ 0.5
USP39-202ENST00000409025 ANKFN1Q8N957 763 aa18.19■□□□□ 0.5
USP39-202ENST00000409025 PAPD5Q8NDF8 572 aaKnown RBP18.19■□□□□ 0.5
USP39-202ENST00000409025 FIG4Q92562 907 aa18.19■□□□□ 0.5
USP39-202ENST00000409025 N4BP2L2Q92802 583 aaPredicted RBP18.19■□□□□ 0.5
USP39-202ENST00000409025 COQ8BQ96D53 544 aa18.19■□□□□ 0.5
USP39-202ENST00000409025 PRAP1Q96NZ9 151 aa18.19■□□□□ 0.5
USP39-202ENST00000409025 NR1H4Q96RI1 486 aaPredicted RBP18.19■□□□□ 0.5
USP39-202ENST00000409025 TBCDQ9BTW9 1192 aa18.19■□□□□ 0.5
USP39-202ENST00000409025 BTBD3Q9Y2F9 522 aa18.19■□□□□ 0.5
USP39-202ENST00000409025 TNRC18O15417 2968 aaPredicted RBP18.19■□□□□ 0.5
USP39-202ENST00000409025 TNFRSF10CO14798 259 aa18.19■□□□□ 0.5
USP39-202ENST00000409025 CPSF4O95639 269 aaKnown RBP18.19■□□□□ 0.5
USP39-202ENST00000409025 RPL3P39023 403 aaKnown RBP18.19■□□□□ 0.5
USP39-202ENST00000409025 DGKEP52429 567 aa18.19■□□□□ 0.5
USP39-202ENST00000409025 YPEL5P62699 121 aa18.19■□□□□ 0.5
USP39-202ENST00000409025 PRDX1Q06830 199 aaKnown RBP18.19■□□□□ 0.5
USP39-202ENST00000409025 MED21Q13503 144 aa18.19■□□□□ 0.5
USP39-202ENST00000409025 R3HCC1LQ7Z5L2 792 aaKnown RBP18.19■□□□□ 0.5
USP39-202ENST00000409025 CALHM3Q86XJ0 350 aa18.19■□□□□ 0.5
USP39-202ENST00000409025 GALNT4Q8N4A0 578 aa18.19■□□□□ 0.5
USP39-202ENST00000409025 REEP4Q9H6H4 257 aa18.19■□□□□ 0.5
USP39-202ENST00000409025 MYNNQ9NPC7 610 aa18.19■□□□□ 0.5
USP39-202ENST00000409025 AGPAT4Q9NRZ5 378 aa18.19■□□□□ 0.5
USP39-202ENST00000409025 SH3BP4Q9P0V3 963 aa18.19■□□□□ 0.5
USP39-202ENST00000409025 SCHIP1Q9P0W5 487 aaPredicted RBP18.19■□□□□ 0.5
USP39-202ENST00000409025 ATP6V1HQ9UI12 483 aa18.19■□□□□ 0.5
USP39-202ENST00000409025 BTNL2Q9UIR0 455 aa18.19■□□□□ 0.5
USP39-202ENST00000409025 ICKQ9UPZ9 632 aa18.19■□□□□ 0.5
USP39-202ENST00000409025 HS3ST3A1Q9Y663 406 aa18.19■□□□□ 0.5
USP39-202ENST00000409025 SCELO95171 688 aa18.18■□□□□ 0.5
USP39-202ENST00000409025 EPN2O95208 641 aa18.18■□□□□ 0.5
USP39-202ENST00000409025 GBAP04062 536 aa18.18■□□□□ 0.5
USP39-202ENST00000409025 KLK1P06870 262 aa18.18■□□□□ 0.5
USP39-202ENST00000409025 HSPA13P48723 471 aa18.18■□□□□ 0.5
USP39-202ENST00000409025 TFF2Q03403 129 aa18.18■□□□□ 0.5
USP39-202ENST00000409025 ABHD18Q0P651 414 aa18.18■□□□□ 0.5
USP39-202ENST00000409025 LRRC74AQ0VAA2 488 aa18.18■□□□□ 0.5
USP39-202ENST00000409025 TPRG1LQ5T0D9 272 aa18.18■□□□□ 0.5
USP39-202ENST00000409025 ABRAXAS1Q6UWZ7 409 aa18.18■□□□□ 0.5
USP39-202ENST00000409025 Q6ZS52 159 aa18.18■□□□□ 0.5
USP39-202ENST00000409025 ZNF621Q6ZSS3 439 aa18.18■□□□□ 0.5
USP39-202ENST00000409025 SLC9B2Q86UD5 537 aa18.18■□□□□ 0.5
USP39-202ENST00000409025 PUM2Q8TB72 1066 aaKnown RBP eCLIP18.18■□□□□ 0.5
USP39-202ENST00000409025 C16orf78Q8WTQ4 265 aa18.18■□□□□ 0.5
USP39-202ENST00000409025 TSACCQ96A04 125 aaPredicted RBP18.18■□□□□ 0.5
USP39-202ENST00000409025 Q9H521 79 aa18.18■□□□□ 0.5
USP39-202ENST00000409025 BATF3Q9NR55 127 aa18.18■□□□□ 0.5
USP39-202ENST00000409025 FEZF1A0PJY2 475 aa18.17■□□□□ 0.5
USP39-202ENST00000409025 CXCR6O00574 342 aa18.17■□□□□ 0.5
USP39-202ENST00000409025 TPST1O60507 370 aa18.17■□□□□ 0.5
USP39-202ENST00000409025 SEMA3DO95025 777 aa18.17■□□□□ 0.5
USP39-202ENST00000409025 GZMMP51124 257 aa18.17■□□□□ 0.5
USP39-202ENST00000409025 CYP4F2P78329 520 aa18.17■□□□□ 0.5
USP39-202ENST00000409025 FOLH1Q04609 750 aa18.17■□□□□ 0.5
USP39-202ENST00000409025 DEPDC1Q5TB30 811 aa18.17■□□□□ 0.5
USP39-202ENST00000409025 KHDRBS2Q5VWX1 349 aaKnown RBP18.17■□□□□ 0.5
USP39-202ENST00000409025 WASH2PQ6VEQ5 465 aa18.17■□□□□ 0.5
USP39-202ENST00000409025 ZNF852Q6ZMS4 543 aa18.17■□□□□ 0.5
USP39-202ENST00000409025 CLECL1Q8IZS7 167 aa18.17■□□□□ 0.5
USP39-202ENST00000409025 ANKRD53Q8N9V6 530 aa18.17■□□□□ 0.5
USP39-202ENST00000409025 OR2A1Q8NGT9 310 aa18.17■□□□□ 0.5
USP39-202ENST00000409025 SEPHS2Q99611 448 aa18.17■□□□□ 0.5
USP39-202ENST00000409025 MS4A8Q9BY19 250 aa18.17■□□□□ 0.5
USP39-202ENST00000409025 BHLHE41Q9C0J9 482 aaPredicted RBP18.17■□□□□ 0.5
USP39-202ENST00000409025 KIR3DX1Q9H7L2 352 aa18.17■□□□□ 0.5
USP39-202ENST00000409025 COQ10BQ9H8M1 238 aa18.17■□□□□ 0.5
USP39-202ENST00000409025 ATAD3AQ9NVI7 634 aa18.17■□□□□ 0.5
USP39-202ENST00000409025 TBC1D29Q9UFV1 150 aa18.17■□□□□ 0.5
USP39-202ENST00000409025 RAB26Q9ULW5 256 aa18.17■□□□□ 0.5
USP39-202ENST00000409025 H0YJX3 145 aa18.17■□□□□ 0.5
USP39-202ENST00000409025 CLIC1O00299 241 aa18.17■□□□□ 0.5
USP39-202ENST00000409025 TXNDC9O14530 226 aa18.17■□□□□ 0.5
USP39-202ENST00000409025 TOR1BO14657 336 aa18.17■□□□□ 0.5
USP39-202ENST00000409025 IGLV3-19P01714 112 aa18.17■□□□□ 0.5
USP39-202ENST00000409025 ZNF26P17031 533 aaPredicted RBP18.17■□□□□ 0.5
USP39-202ENST00000409025 AK4P27144 223 aaPredicted RBP18.17■□□□□ 0.5
USP39-202ENST00000409025 NDUFS1P28331 727 aa18.17■□□□□ 0.5
USP39-202ENST00000409025 CSNK1G2P78368 415 aa18.17■□□□□ 0.5
USP39-202ENST00000409025 C2orf80Q0P641 193 aa18.17■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms