RNA–Protein interactions for RNA: ENST00000400053.8

PTPRM-202, Transcript of protein tyrosine phosphatase, receptor type M, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PTPRM, Length 5,292 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRM-202ENST00000400053 CD72P21854 359 aa8.62□□□□□ -1.03
PTPRM-202ENST00000400053 ALAS2P22557 587 aa8.62□□□□□ -1.03
PTPRM-202ENST00000400053 IVDP26440 423 aa8.62□□□□□ -1.03
PTPRM-202ENST00000400053 GABRR2P28476 465 aa8.62□□□□□ -1.03
PTPRM-202ENST00000400053 NDST2P52849 883 aa8.62□□□□□ -1.03
PTPRM-202ENST00000400053 DIO3P55073 304 aa8.62□□□□□ -1.03
PTPRM-202ENST00000400053 SLC10A7Q0GE19 358 aa8.62□□□□□ -1.03
PTPRM-202ENST00000400053 PLA2G4EQ3MJ16 856 aa8.62□□□□□ -1.03
PTPRM-202ENST00000400053 OGFRL1Q5TC84 451 aaPredicted RBP8.62□□□□□ -1.03
PTPRM-202ENST00000400053 TLDC1Q6P9B6 456 aa8.62□□□□□ -1.03
PTPRM-202ENST00000400053 CYP2U1Q7Z449 544 aa8.62□□□□□ -1.03
PTPRM-202ENST00000400053 NRSN1Q8IZ57 195 aa8.62□□□□□ -1.03
PTPRM-202ENST00000400053 ZNF709Q8N972 641 aa8.62□□□□□ -1.03
PTPRM-202ENST00000400053 ZNF527Q8NB42 609 aa8.62□□□□□ -1.03
PTPRM-202ENST00000400053 NR4A3Q92570 626 aa8.62□□□□□ -1.03
PTPRM-202ENST00000400053 ZNF641Q96N77 438 aaPredicted RBP8.62□□□□□ -1.03
PTPRM-202ENST00000400053 PIGVQ9NUD9 493 aa8.62□□□□□ -1.03
PTPRM-202ENST00000400053 FARSAQ9Y285 508 aaKnown RBP8.62□□□□□ -1.03
PTPRM-202ENST00000400053 AKAP11Q9UKA4 1901 aa8.62□□□□□ -1.03
PTPRM-202ENST00000400053 C11orf97A0A1B0GVM6 126 aaPredicted RBP8.62□□□□□ -1.03
PTPRM-202ENST00000400053 GABRDO14764 452 aa8.62□□□□□ -1.03
PTPRM-202ENST00000400053 CLEC3AO75596 197 aa8.62□□□□□ -1.03
PTPRM-202ENST00000400053 CREG1O75629 220 aa8.62□□□□□ -1.03
PTPRM-202ENST00000400053 RASGRP1O95267 797 aa8.62□□□□□ -1.03
PTPRM-202ENST00000400053 POP4O95707 220 aaKnown RBP8.62□□□□□ -1.03
PTPRM-202ENST00000400053 IFNA2P01563 188 aa8.62□□□□□ -1.03
PTPRM-202ENST00000400053 PIM1P11309 404 aaPredicted RBP8.62□□□□□ -1.03
PTPRM-202ENST00000400053 G6PDP11413 515 aa8.62□□□□□ -1.03
PTPRM-202ENST00000400053 RPS3P23396 243 aaKnown RBP eCLIP8.62□□□□□ -1.03
PTPRM-202ENST00000400053 ACVR2AP27037 513 aa8.62□□□□□ -1.03
PTPRM-202ENST00000400053 CORO1AP31146 461 aaKnown RBP8.62□□□□□ -1.03
PTPRM-202ENST00000400053 GMPRP36959 345 aa8.62□□□□□ -1.03
PTPRM-202ENST00000400053 SELENOVP59797 346 aa8.62□□□□□ -1.03
PTPRM-202ENST00000400053 MCCD1P59942 119 aaPredicted RBP8.62□□□□□ -1.03
PTPRM-202ENST00000400053 CLDN10P78369 228 aa8.62□□□□□ -1.03
PTPRM-202ENST00000400053 TMEM164Q5U3C3 297 aa8.62□□□□□ -1.03
PTPRM-202ENST00000400053 RGMBQ6NW40 437 aa8.62□□□□□ -1.03
PTPRM-202ENST00000400053 TIFABQ6ZNK6 161 aa8.62□□□□□ -1.03
PTPRM-202ENST00000400053 PAQR7Q86WK9 346 aa8.62□□□□□ -1.03
PTPRM-202ENST00000400053 PQLC3Q8N755 202 aa8.62□□□□□ -1.03
PTPRM-202ENST00000400053 DENND1AQ8TEH3 1009 aa8.62□□□□□ -1.03
PTPRM-202ENST00000400053 ZNF431Q8TF32 576 aaPredicted RBP8.62□□□□□ -1.03
PTPRM-202ENST00000400053 ASB12Q8WXK4 309 aa8.62□□□□□ -1.03
PTPRM-202ENST00000400053 HAPLN3Q96S86 360 aa8.62□□□□□ -1.03
PTPRM-202ENST00000400053 OSER1Q9NX31 292 aa8.62□□□□□ -1.03
PTPRM-202ENST00000400053 GTF2IRD1Q9UHL9 959 aa8.62□□□□□ -1.03
PTPRM-202ENST00000400053 CRYBG1Q9Y4K1 1723 aa8.62□□□□□ -1.03
PTPRM-202ENST00000400053 GLTPD2A6NH11 291 aa8.61□□□□□ -1.03
PTPRM-202ENST00000400053 E7ESA3 106 aa8.61□□□□□ -1.03
PTPRM-202ENST00000400053 SAP18O00422 153 aaKnown RBP8.61□□□□□ -1.03
PTPRM-202ENST00000400053 FAM189A1O60320 539 aa8.61□□□□□ -1.03
PTPRM-202ENST00000400053 CXCL14O95715 111 aa8.61□□□□□ -1.03
PTPRM-202ENST00000400053 PLGP00747 810 aaPredicted RBP8.61□□□□□ -1.03
PTPRM-202ENST00000400053 HLA-DQB2P05538 268 aa8.61□□□□□ -1.03
PTPRM-202ENST00000400053 CLCN4P51793 760 aa8.61□□□□□ -1.03
PTPRM-202ENST00000400053 XKP51811 444 aa8.61□□□□□ -1.03
PTPRM-202ENST00000400053 PGGT1BP53609 377 aa8.61□□□□□ -1.03
PTPRM-202ENST00000400053 SLC13A2Q13183 592 aa8.61□□□□□ -1.03
PTPRM-202ENST00000400053 FBXO43Q4G163 708 aa8.61□□□□□ -1.03
PTPRM-202ENST00000400053 SPANXN4Q5MJ08 99 aa8.61□□□□□ -1.03
PTPRM-202ENST00000400053 PEBP4Q96S96 227 aa8.61□□□□□ -1.03
PTPRM-202ENST00000400053 MAGEH1Q9H213 219 aa8.61□□□□□ -1.03
PTPRM-202ENST00000400053 TXNRD2Q9NNW7 524 aa8.61□□□□□ -1.03
PTPRM-202ENST00000400053 ZIM2Q9NZV7 527 aa8.61□□□□□ -1.03
PTPRM-202ENST00000400053 ELOA3DA6NLF2 546 aaPredicted RBP8.61□□□□□ -1.03
PTPRM-202ENST00000400053 C9J4A7 227 aa8.61□□□□□ -1.03
PTPRM-202ENST00000400053 ENTPD6O75354 484 aa8.61□□□□□ -1.03
PTPRM-202ENST00000400053 FPR1P21462 350 aa8.61□□□□□ -1.03
PTPRM-202ENST00000400053 MAGEA8P43361 318 aa8.61□□□□□ -1.03
PTPRM-202ENST00000400053 MAP2K4P45985 399 aa8.61□□□□□ -1.03
PTPRM-202ENST00000400053 TMBIM6P55061 237 aa8.61□□□□□ -1.03
PTPRM-202ENST00000400053 GNG2P59768 71 aa8.61□□□□□ -1.03
PTPRM-202ENST00000400053 PRKCDQ05655 676 aa8.61□□□□□ -1.03
PTPRM-202ENST00000400053 ELOA3BQ3SY89 546 aa8.61□□□□□ -1.03
PTPRM-202ENST00000400053 ARSJQ5FYB0 599 aaPredicted RBP8.61□□□□□ -1.03
PTPRM-202ENST00000400053 SPRYD7Q5W111 196 aa8.61□□□□□ -1.03
PTPRM-202ENST00000400053 CCDC28AQ8IWP9 274 aa8.61□□□□□ -1.03
PTPRM-202ENST00000400053 ATP6V1C2Q8NEY4 427 aa8.61□□□□□ -1.03
PTPRM-202ENST00000400053 ELOA3Q8NG57 546 aa8.61□□□□□ -1.03
PTPRM-202ENST00000400053 FBXO27Q8NI29 283 aa8.61□□□□□ -1.03
PTPRM-202ENST00000400053 CNIH3Q8TBE1 160 aa8.61□□□□□ -1.03
PTPRM-202ENST00000400053 KLHL6Q8WZ60 621 aa8.61□□□□□ -1.03
PTPRM-202ENST00000400053 TMIGD2Q96BF3 282 aa8.61□□□□□ -1.03
PTPRM-202ENST00000400053 LMLNQ96KR4 655 aa8.61□□□□□ -1.03
PTPRM-202ENST00000400053 UCK2Q9BZX2 261 aa8.61□□□□□ -1.03
PTPRM-202ENST00000400053 METTL8Q9H825 291 aaKnown RBP8.61□□□□□ -1.03
PTPRM-202ENST00000400053 SDHAF3Q9NRP4 125 aa8.61□□□□□ -1.03
PTPRM-202ENST00000400053 EMC3Q9P0I2 261 aa8.61□□□□□ -1.03
PTPRM-202ENST00000400053 CYTH4Q9UIA0 394 aa8.61□□□□□ -1.03
PTPRM-202ENST00000400053 C14orf166Q9Y224 244 aaKnown RBP8.61□□□□□ -1.03
PTPRM-202ENST00000400053 C4AP0C0L4 1744 aa8.61□□□□□ -1.03
PTPRM-202ENST00000400053 C4BP0C0L5 1744 aa8.61□□□□□ -1.03
PTPRM-202ENST00000400053 NAV1Q8NEY1 1877 aa8.61□□□□□ -1.03
PTPRM-202ENST00000400053 FXYD6-FXYD2A0A087WZ82 144 aa8.61□□□□□ -1.03
PTPRM-202ENST00000400053 TLR4O00206 839 aa8.61□□□□□ -1.03
PTPRM-202ENST00000400053 RAB36O95755 333 aa8.61□□□□□ -1.03
PTPRM-202ENST00000400053 PRKCGP05129 697 aa8.61□□□□□ -1.03
PTPRM-202ENST00000400053 ALPPP05187 535 aa8.61□□□□□ -1.03
PTPRM-202ENST00000400053 PORP16435 677 aaPredicted RBP8.61□□□□□ -1.03
PTPRM-202ENST00000400053 ERVK-21P61565 698 aa8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 69.4 ms