RNA–Protein interactions for RNA: ENST00000399804.5

SCAF4-202, Transcript of SR-related CTD associated factor 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCAF4, Length 4,127 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-202ENST00000399804 METTL2BQ6P1Q9 378 aaKnown RBP13.54□□□□□ -0.24
SCAF4-202ENST00000399804 TSACCQ96A04 125 aaPredicted RBP13.54□□□□□ -0.24
SCAF4-202ENST00000399804 EGLN2Q96KS0 407 aa13.54□□□□□ -0.24
SCAF4-202ENST00000399804 WDR92Q96MX6 357 aa13.54□□□□□ -0.24
SCAF4-202ENST00000399804 TNFRSF12AQ9NP84 129 aa13.54□□□□□ -0.24
SCAF4-202ENST00000399804 MRPS33Q9Y291 106 aaKnown RBP13.54□□□□□ -0.24
SCAF4-202ENST00000399804 NUMBLQ9Y6R0 609 aa13.54□□□□□ -0.24
SCAF4-202ENST00000399804 CASP8AP2Q9UKL3 1982 aa13.53□□□□□ -0.24
SCAF4-202ENST00000399804 A0A096LPI6 279 aa13.53□□□□□ -0.24
SCAF4-202ENST00000399804 FEZF1A0PJY2 475 aa13.53□□□□□ -0.24
SCAF4-202ENST00000399804 FBP2O00757 339 aa13.53□□□□□ -0.24
SCAF4-202ENST00000399804 OR7A17O14581 309 aa13.53□□□□□ -0.24
SCAF4-202ENST00000399804 AP3D1O14617 1153 aa13.53□□□□□ -0.24
SCAF4-202ENST00000399804 BCKDKO14874 412 aa13.53□□□□□ -0.24
SCAF4-202ENST00000399804 HOXC11O43248 304 aaPredicted RBP13.53□□□□□ -0.24
SCAF4-202ENST00000399804 HSD17B1P14061 328 aa13.53□□□□□ -0.24
SCAF4-202ENST00000399804 POU2F1P14859 743 aa13.53□□□□□ -0.24
SCAF4-202ENST00000399804 CCR4P51679 360 aa13.53□□□□□ -0.24
SCAF4-202ENST00000399804 PRR5P85299 388 aa13.53□□□□□ -0.24
SCAF4-202ENST00000399804 DAB2P98082 770 aa13.53□□□□□ -0.24
SCAF4-202ENST00000399804 GPR149Q86SP6 731 aa13.53□□□□□ -0.24
SCAF4-202ENST00000399804 ZNF480Q8WV37 535 aa13.53□□□□□ -0.24
SCAF4-202ENST00000399804 CDK3Q00526 305 aa13.53□□□□□ -0.24
SCAF4-202ENST00000399804 STX4Q12846 297 aa13.53□□□□□ -0.24
SCAF4-202ENST00000399804 TOP3AQ13472 1001 aaPredicted RBP13.53□□□□□ -0.24
SCAF4-202ENST00000399804 SPATS1Q496A3 300 aa13.53□□□□□ -0.24
SCAF4-202ENST00000399804 HLA-DQA1Q5Y7H0 255 aa13.53□□□□□ -0.24
SCAF4-202ENST00000399804 PNCKQ6P2M8 343 aa13.53□□□□□ -0.24
SCAF4-202ENST00000399804 PGM2L1Q6PCE3 622 aa13.53□□□□□ -0.24
SCAF4-202ENST00000399804 ZSWIM9Q86XI8 627 aa13.53□□□□□ -0.24
SCAF4-202ENST00000399804 SETD7Q8WTS6 366 aaKnown RBP13.53□□□□□ -0.24
SCAF4-202ENST00000399804 MCCC1Q96RQ3 725 aaPredicted RBP13.53□□□□□ -0.24
SCAF4-202ENST00000399804 LYSMD1Q96S90 227 aa13.53□□□□□ -0.24
SCAF4-202ENST00000399804 PRRG3Q9BZD7 231 aa13.53□□□□□ -0.24
SCAF4-202ENST00000399804 TUBB1Q9H4B7 451 aa13.53□□□□□ -0.24
SCAF4-202ENST00000399804 SLAMF8Q9P0V8 285 aa13.53□□□□□ -0.24
SCAF4-202ENST00000399804 OR52A4PA6NMU1 304 aa13.53□□□□□ -0.24
SCAF4-202ENST00000399804 NPC1O15118 1278 aa13.53□□□□□ -0.24
SCAF4-202ENST00000399804 ADAMDEC1O15204 470 aa13.53□□□□□ -0.24
SCAF4-202ENST00000399804 SERPINI2O75830 405 aa13.53□□□□□ -0.24
SCAF4-202ENST00000399804 LAMP1P11279 417 aa13.53□□□□□ -0.24
SCAF4-202ENST00000399804 TYRP1P17643 537 aa13.53□□□□□ -0.24
SCAF4-202ENST00000399804 POLR2CP19387 275 aaPredicted RBP13.53□□□□□ -0.24
SCAF4-202ENST00000399804 PRKACGP22612 351 aa13.53□□□□□ -0.24
SCAF4-202ENST00000399804 BTN3A2P78410 334 aa13.53□□□□□ -0.24
SCAF4-202ENST00000399804 CDK6Q00534 326 aa13.53□□□□□ -0.24
SCAF4-202ENST00000399804 C10orf62Q5T681 223 aaPredicted RBP13.53□□□□□ -0.24
SCAF4-202ENST00000399804 GPR107Q5VW38 600 aa13.53□□□□□ -0.24
SCAF4-202ENST00000399804 NEK10Q6ZWH5 1172 aa13.53□□□□□ -0.24
SCAF4-202ENST00000399804 CLECL1Q8IZS7 167 aa13.53□□□□□ -0.24
SCAF4-202ENST00000399804 SVOPLQ8N434 492 aa13.53□□□□□ -0.24
SCAF4-202ENST00000399804 ALG14Q96F25 216 aa13.53□□□□□ -0.24
SCAF4-202ENST00000399804 MAELQ96JY0 434 aaKnown RBP13.53□□□□□ -0.24
SCAF4-202ENST00000399804 SLC35G5Q96KT7 338 aa13.53□□□□□ -0.24
SCAF4-202ENST00000399804 SPATA7Q9P0W8 599 aa13.53□□□□□ -0.24
SCAF4-202ENST00000399804 LSM1O15116 133 aaKnown RBP13.52□□□□□ -0.24
SCAF4-202ENST00000399804 BCL10O95999 233 aa13.52□□□□□ -0.24
SCAF4-202ENST00000399804 IL3P08700 152 aa13.52□□□□□ -0.24
SCAF4-202ENST00000399804 CSNK2A2P19784 350 aaPredicted RBP13.52□□□□□ -0.24
SCAF4-202ENST00000399804 ST13P50502 369 aaKnown RBP13.52□□□□□ -0.24
SCAF4-202ENST00000399804 C1orf61Q13536 156 aa13.52□□□□□ -0.24
SCAF4-202ENST00000399804 DUSP6Q16828 381 aa13.52□□□□□ -0.24
SCAF4-202ENST00000399804 UNC5DQ6UXZ4 953 aa13.52□□□□□ -0.24
SCAF4-202ENST00000399804 TRIM69Q86WT6 500 aa13.52□□□□□ -0.24
SCAF4-202ENST00000399804 SMYD1Q8NB12 490 aa13.52□□□□□ -0.24
SCAF4-202ENST00000399804 DPH7Q9BTV6 452 aa13.52□□□□□ -0.24
SCAF4-202ENST00000399804 VAPAQ9P0L0 249 aa13.52□□□□□ -0.24
SCAF4-202ENST00000399804 UTS2RQ9UKP6 389 aa13.52□□□□□ -0.24
SCAF4-202ENST00000399804 SARDHQ9UL12 918 aa13.52□□□□□ -0.24
SCAF4-202ENST00000399804 CAPN5O15484 640 aaPredicted RBP13.52□□□□□ -0.25
SCAF4-202ENST00000399804 CLIC3O95833 236 aa13.52□□□□□ -0.25
SCAF4-202ENST00000399804 CCNYL3P0C7X3 344 aa13.52□□□□□ -0.25
SCAF4-202ENST00000399804 CD9P21926 228 aa13.52□□□□□ -0.25
SCAF4-202ENST00000399804 TTKP33981 857 aa13.52□□□□□ -0.25
SCAF4-202ENST00000399804 ZXDBP98169 803 aa13.52□□□□□ -0.25
SCAF4-202ENST00000399804 FAM109BQ6ICB4 259 aaPredicted RBP13.52□□□□□ -0.25
SCAF4-202ENST00000399804 CEACAM20Q6UY09 585 aa13.52□□□□□ -0.25
SCAF4-202ENST00000399804 OR5K1Q8NHB7 308 aa13.52□□□□□ -0.25
SCAF4-202ENST00000399804 DGCR14Q96DF8 476 aaKnown RBP13.52□□□□□ -0.25
SCAF4-202ENST00000399804 PYURFQ96I23 114 aa13.52□□□□□ -0.25
SCAF4-202ENST00000399804 SPACA7Q96KW9 195 aa13.52□□□□□ -0.25
SCAF4-202ENST00000399804 COL21A1Q96P44 957 aa13.52□□□□□ -0.25
SCAF4-202ENST00000399804 GSDMCQ9BYG8 508 aa13.52□□□□□ -0.25
SCAF4-202ENST00000399804 CTPS2Q9NRF8 586 aa13.52□□□□□ -0.25
SCAF4-202ENST00000399804 HEBP1Q9NRV9 189 aa13.52□□□□□ -0.25
SCAF4-202ENST00000399804 TMEM181Q9P2C4 612 aa13.52□□□□□ -0.25
SCAF4-202ENST00000399804 ASB1Q9Y576 335 aa13.52□□□□□ -0.25
SCAF4-202ENST00000399804 PCDHB3Q9Y5E6 796 aa13.52□□□□□ -0.25
SCAF4-202ENST00000399804 H6PDO95479 791 aa13.52□□□□□ -0.25
SCAF4-202ENST00000399804 C8orf89P0DMQ9 161 aa13.52□□□□□ -0.25
SCAF4-202ENST00000399804 SDC1P18827 310 aa13.52□□□□□ -0.25
SCAF4-202ENST00000399804 JAK1P23458 1154 aa13.52□□□□□ -0.25
SCAF4-202ENST00000399804 NOS3P29474 1203 aa13.52□□□□□ -0.25
SCAF4-202ENST00000399804 S100A5P33763 92 aa13.52□□□□□ -0.25
SCAF4-202ENST00000399804 CLDN2P57739 230 aa13.52□□□□□ -0.25
SCAF4-202ENST00000399804 DSTNP60981 165 aa13.52□□□□□ -0.25
SCAF4-202ENST00000399804 IHHQ14623 411 aa13.52□□□□□ -0.25
SCAF4-202ENST00000399804 LAPTM4AQ15012 233 aa13.52□□□□□ -0.25
SCAF4-202ENST00000399804 TOR1AIP1Q5JTV8 583 aa13.52□□□□□ -0.25
SCAF4-202ENST00000399804 ATG9BQ674R7 924 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms