RNA–Protein interactions for RNA: ENST00000399120.5

HLCS-202, Transcript of holocarboxylase synthetase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HLCS, Length 6,466 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLCS-202ENST00000399120 PLD2O14939 933 aa11.31□□□□□ -0.6
HLCS-202ENST00000399120 DHPSP49366 369 aaPredicted RBP11.31□□□□□ -0.6
HLCS-202ENST00000399120 DGKEP52429 567 aa11.31□□□□□ -0.6
HLCS-202ENST00000399120 TMBIM6P55061 237 aa11.31□□□□□ -0.6
HLCS-202ENST00000399120 HERVK_113P63132 956 aa11.31□□□□□ -0.6
HLCS-202ENST00000399120 KCTD19Q17RG1 926 aaPredicted RBP11.31□□□□□ -0.6
HLCS-202ENST00000399120 ZBED5Q49AG3 693 aa11.31□□□□□ -0.6
HLCS-202ENST00000399120 CARD16Q5EG05 197 aa11.31□□□□□ -0.6
HLCS-202ENST00000399120 OR2T5Q6IEZ7 315 aa11.31□□□□□ -0.6
HLCS-202ENST00000399120 CENPSQ8N2Z9 138 aa11.31□□□□□ -0.6
HLCS-202ENST00000399120 OR2T29Q8NH02 315 aa11.31□□□□□ -0.6
HLCS-202ENST00000399120 ELP5Q8TE02 316 aa11.31□□□□□ -0.6
HLCS-202ENST00000399120 CDK15Q96Q40 435 aa11.31□□□□□ -0.6
HLCS-202ENST00000399120 ERVK-6Q9BXR3 956 aa11.31□□□□□ -0.6
HLCS-202ENST00000399120 BEX2Q9BXY8 128 aa11.31□□□□□ -0.6
HLCS-202ENST00000399120 OR51I1Q9H343 314 aa11.31□□□□□ -0.6
HLCS-202ENST00000399120 PTGES2Q9H7Z7 377 aa11.31□□□□□ -0.6
HLCS-202ENST00000399120 PLEKHA3Q9HB20 300 aa11.31□□□□□ -0.6
HLCS-202ENST00000399120 BEX1Q9HBH7 125 aa11.31□□□□□ -0.6
HLCS-202ENST00000399120 ZNF451Q9Y4E5 1061 aa11.31□□□□□ -0.6
HLCS-202ENST00000399120 SLC38A8A6NNN8 435 aa11.3□□□□□ -0.6
HLCS-202ENST00000399120 GABRDO14764 452 aa11.3□□□□□ -0.6
HLCS-202ENST00000399120 MATN1P21941 496 aa11.3□□□□□ -0.6
HLCS-202ENST00000399120 RPS3P23396 243 aaKnown RBP eCLIP11.3□□□□□ -0.6
HLCS-202ENST00000399120 SLC18A2Q05940 514 aa11.3□□□□□ -0.6
HLCS-202ENST00000399120 PPIGQ13427 754 aaKnown RBP eCLIP11.3□□□□□ -0.6
HLCS-202ENST00000399120 DUOXA1Q1HG43 343 aa11.3□□□□□ -0.6
HLCS-202ENST00000399120 GLT8D1Q68CQ7 371 aa11.3□□□□□ -0.6
HLCS-202ENST00000399120 DENND1AQ8TEH3 1009 aa11.3□□□□□ -0.6
HLCS-202ENST00000399120 NKD2Q969F2 451 aaPredicted RBP11.3□□□□□ -0.6
HLCS-202ENST00000399120 TCEAL4Q96EI5 215 aa11.3□□□□□ -0.6
HLCS-202ENST00000399120 UBQLN2Q9UHD9 624 aa11.3□□□□□ -0.6
HLCS-202ENST00000399120 NUFIP1Q9UHK0 495 aaKnown RBP11.3□□□□□ -0.6
HLCS-202ENST00000399120 SLC7A11Q9UPY5 501 aa11.3□□□□□ -0.6
HLCS-202ENST00000399120 A8MU76 341 aa11.3□□□□□ -0.6
HLCS-202ENST00000399120 RNF13O43567 381 aa11.3□□□□□ -0.6
HLCS-202ENST00000399120 XPNPEP2O43895 674 aa11.3□□□□□ -0.6
HLCS-202ENST00000399120 KLRC4O43908 158 aa11.3□□□□□ -0.6
HLCS-202ENST00000399120 LRCH4O75427 683 aa11.3□□□□□ -0.6
HLCS-202ENST00000399120 HTR2AP28223 471 aa11.3□□□□□ -0.6
HLCS-202ENST00000399120 ZNF81P51508 661 aa11.3□□□□□ -0.6
HLCS-202ENST00000399120 RAB4BP61018 213 aa11.3□□□□□ -0.6
HLCS-202ENST00000399120 HNRNPDQ14103 355 aaKnown RBP11.3□□□□□ -0.6
HLCS-202ENST00000399120 GIMAP5Q96F15 307 aa11.3□□□□□ -0.6
HLCS-202ENST00000399120 LIN37Q96GY3 246 aaPredicted RBP11.3□□□□□ -0.6
HLCS-202ENST00000399120 ACBD6Q9BR61 282 aa11.3□□□□□ -0.6
HLCS-202ENST00000399120 BTBD1Q9H0C5 482 aa11.3□□□□□ -0.6
HLCS-202ENST00000399120 PCDHAC1Q9H158 963 aa11.3□□□□□ -0.6
HLCS-202ENST00000399120 ZNF701Q9NV72 531 aaPredicted RBP11.3□□□□□ -0.6
HLCS-202ENST00000399120 PCDHA2Q9Y5H9 948 aa11.3□□□□□ -0.6
HLCS-202ENST00000399120 SLC35F4A4IF30 521 aa11.3□□□□□ -0.6
HLCS-202ENST00000399120 GRXCR1A8MXD5 290 aa11.3□□□□□ -0.6
HLCS-202ENST00000399120 PROM1O43490 865 aa11.3□□□□□ -0.6
HLCS-202ENST00000399120 SLC19A2O60779 497 aa11.3□□□□□ -0.6
HLCS-202ENST00000399120 GRIA2P42262 883 aa11.3□□□□□ -0.6
HLCS-202ENST00000399120 RFTN1Q14699 578 aaPredicted RBP11.3□□□□□ -0.6
HLCS-202ENST00000399120 C6orf183Q5T699 404 aa11.3□□□□□ -0.6
HLCS-202ENST00000399120 ANKRD22Q5VYY1 191 aa11.3□□□□□ -0.6
HLCS-202ENST00000399120 MON1BQ7L1V2 547 aa11.3□□□□□ -0.6
HLCS-202ENST00000399120 LRRC58Q96CX6 371 aa11.3□□□□□ -0.6
HLCS-202ENST00000399120 ZNF641Q96N77 438 aaPredicted RBP11.3□□□□□ -0.6
HLCS-202ENST00000399120 ALPK1Q96QP1 1244 aa11.3□□□□□ -0.6
HLCS-202ENST00000399120 TSNAXQ99598 290 aaKnown RBP11.3□□□□□ -0.6
HLCS-202ENST00000399120 RANBP3Q9H6Z4 567 aaPredicted RBP11.3□□□□□ -0.6
HLCS-202ENST00000399120 GMEB2Q9UKD1 530 aa11.3□□□□□ -0.6
HLCS-202ENST00000399120 PCDHGA6Q9Y5G7 932 aa11.3□□□□□ -0.6
HLCS-202ENST00000399120 BRINP1O60477 761 aa11.3□□□□□ -0.6
HLCS-202ENST00000399120 ECI2O75521 394 aa11.3□□□□□ -0.6
HLCS-202ENST00000399120 CYP3A5P20815 502 aa11.3□□□□□ -0.6
HLCS-202ENST00000399120 CLCNKBP51801 687 aa11.3□□□□□ -0.6
HLCS-202ENST00000399120 NUDT6P53370 316 aa11.3□□□□□ -0.6
HLCS-202ENST00000399120 CTBP2P56545 445 aa11.3□□□□□ -0.6
HLCS-202ENST00000399120 TATDN1Q6P1N9 297 aa11.3□□□□□ -0.6
HLCS-202ENST00000399120 KLHDC10Q6PID8 442 aa11.3□□□□□ -0.6
HLCS-202ENST00000399120 OR14K1Q8NGZ2 314 aa11.3□□□□□ -0.6
HLCS-202ENST00000399120 TMBIM1Q969X1 311 aa11.3□□□□□ -0.6
HLCS-202ENST00000399120 KREMEN1Q96MU8 473 aa11.3□□□□□ -0.6
HLCS-202ENST00000399120 FZD10Q9ULW2 581 aa11.3□□□□□ -0.6
HLCS-202ENST00000399120 HHLA1C9JL84 531 aa11.3□□□□□ -0.6
HLCS-202ENST00000399120 TLX2O43763 284 aaPredicted RBP11.3□□□□□ -0.6
HLCS-202ENST00000399120 GTF2F2P13984 249 aa11.3□□□□□ -0.6
HLCS-202ENST00000399120 CCND3P30281 292 aaPredicted RBP11.3□□□□□ -0.6
HLCS-202ENST00000399120 SLC9A3P48764 834 aa11.3□□□□□ -0.6
HLCS-202ENST00000399120 OTOP2Q7RTS6 562 aa11.3□□□□□ -0.6
HLCS-202ENST00000399120 ZNF584Q8IVC4 421 aa11.3□□□□□ -0.6
HLCS-202ENST00000399120 PYROXD2Q8N2H3 581 aa11.3□□□□□ -0.6
HLCS-202ENST00000399120 NSMAFQ92636 917 aa11.3□□□□□ -0.6
HLCS-202ENST00000399120 OSTF1Q92882 214 aa11.3□□□□□ -0.6
HLCS-202ENST00000399120 TUBA1CQ9BQE3 449 aa11.3□□□□□ -0.6
HLCS-202ENST00000399120 TSSK6Q9BXA6 273 aa11.3□□□□□ -0.6
HLCS-202ENST00000399120 OAZ3Q9UMX2 235 aa11.3□□□□□ -0.6
HLCS-202ENST00000399120 HSBP1L1C9JCN9 74 aa11.29□□□□□ -0.6
HLCS-202ENST00000399120 FLRT2O43155 660 aa11.29□□□□□ -0.6
HLCS-202ENST00000399120 IL3P08700 152 aa11.29□□□□□ -0.6
HLCS-202ENST00000399120 CD3GP09693 182 aa11.29□□□□□ -0.6
HLCS-202ENST00000399120 PIAS4Q8N2W9 510 aaPredicted RBP11.29□□□□□ -0.6
HLCS-202ENST00000399120 SLC6A7Q99884 636 aa11.29□□□□□ -0.6
HLCS-202ENST00000399120 USP29Q9HBJ7 922 aa11.29□□□□□ -0.6
HLCS-202ENST00000399120 EIF2B3Q9NR50 452 aaKnown RBP11.29□□□□□ -0.6
HLCS-202ENST00000399120 ZDHHC3Q9NYG2 299 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 68.8 ms