RNA–Protein interactions for RNA: ENST00000398431.2

TFF3-202, Transcript of trefoil factor 3, humanhuman

TSL 3

Gene TFF3, Length 452 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TFF3-202ENST00000398431 DHRS7Q9Y394 339 aa11.35□□□□□ -0.59
TFF3-202ENST00000398431 CSMD2Q7Z408 3487 aa11.34□□□□□ -0.59
TFF3-202ENST00000398431 CACNA1CQ13936 2221 aa11.34□□□□□ -0.59
TFF3-202ENST00000398431 ZCWPW2A0A1B0GU75 182 aa11.34□□□□□ -0.59
TFF3-202ENST00000398431 ZNF839A8K0R7 811 aa11.34□□□□□ -0.59
TFF3-202ENST00000398431 E5RI56 91 aa11.34□□□□□ -0.59
TFF3-202ENST00000398431 SGK494L7N484 410 aa11.34□□□□□ -0.59
TFF3-202ENST00000398431 PFDN6O15212 129 aa11.34□□□□□ -0.59
TFF3-202ENST00000398431 ZNHIT1O43257 154 aa11.34□□□□□ -0.59
TFF3-202ENST00000398431 ZBTB14O43829 449 aa11.34□□□□□ -0.59
TFF3-202ENST00000398431 SYF2O95926 243 aaKnown RBP11.34□□□□□ -0.59
TFF3-202ENST00000398431 COX6B1P14854 86 aa11.34□□□□□ -0.59
TFF3-202ENST00000398431 IL1RNP18510 177 aa11.34□□□□□ -0.59
TFF3-202ENST00000398431 MAGEA6P43360 314 aa11.34□□□□□ -0.59
TFF3-202ENST00000398431 XCR1P46094 333 aa11.34□□□□□ -0.59
TFF3-202ENST00000398431 CSNK1G2P78368 415 aa11.34□□□□□ -0.59
TFF3-202ENST00000398431 TIAL1Q01085 375 aaKnown RBP eCLIP11.34□□□□□ -0.59
TFF3-202ENST00000398431 RBPJQ06330 500 aa11.34□□□□□ -0.59
TFF3-202ENST00000398431 PTK6Q13882 451 aa11.34□□□□□ -0.59
TFF3-202ENST00000398431 RPS6KA1Q15418 735 aa11.34□□□□□ -0.59
TFF3-202ENST00000398431 LONRF1Q17RB8 773 aa11.34□□□□□ -0.59
TFF3-202ENST00000398431 MINDY4Q4G0A6 757 aa11.34□□□□□ -0.59
TFF3-202ENST00000398431 KRTCAP3Q53RY4 240 aa11.34□□□□□ -0.59
TFF3-202ENST00000398431 ANKRD22Q5VYY1 191 aa11.34□□□□□ -0.59
TFF3-202ENST00000398431 NCCRP1Q6ZVX7 275 aaPredicted RBP11.34□□□□□ -0.59
TFF3-202ENST00000398431 SIAH3Q8IW03 269 aa11.34□□□□□ -0.59
TFF3-202ENST00000398431 M1APQ8TC57 530 aa11.34□□□□□ -0.59
TFF3-202ENST00000398431 EBNA1BP2Q99848 306 aaKnown RBP11.34□□□□□ -0.59
TFF3-202ENST00000398431 KCNK13Q9HB14 408 aa11.34□□□□□ -0.59
TFF3-202ENST00000398431 MMP25Q9NPA2 562 aa11.34□□□□□ -0.59
TFF3-202ENST00000398431 KLHL1Q9NR64 748 aa11.34□□□□□ -0.59
TFF3-202ENST00000398431 INTS10Q9NVR2 710 aaKnown RBP11.34□□□□□ -0.59
TFF3-202ENST00000398431 ANKRD10Q9NXR5 420 aa11.34□□□□□ -0.59
TFF3-202ENST00000398431 HCN3Q9P1Z3 774 aa11.34□□□□□ -0.59
TFF3-202ENST00000398431 HIVEP1P15822 2718 aa11.33□□□□□ -0.6
TFF3-202ENST00000398431 FAM237BA0A1B0GVD1 139 aa11.33□□□□□ -0.6
TFF3-202ENST00000398431 NPIPA5E9PKD4 350 aa11.33□□□□□ -0.6
TFF3-202ENST00000398431 TTI1O43156 1089 aa11.33□□□□□ -0.6
TFF3-202ENST00000398431 NEURL1O76050 574 aa11.33□□□□□ -0.6
TFF3-202ENST00000398431 HRH2P25021 359 aa11.33□□□□□ -0.6
TFF3-202ENST00000398431 COILP38432 576 aaPredicted RBP11.33□□□□□ -0.6
TFF3-202ENST00000398431 RPS15AP62244 130 aaKnown RBP11.33□□□□□ -0.6
TFF3-202ENST00000398431 RHAGQ02094 409 aa11.33□□□□□ -0.6
TFF3-202ENST00000398431 OR1C1Q15619 314 aa11.33□□□□□ -0.6
TFF3-202ENST00000398431 TRIP13Q15645 432 aaPredicted RBP11.33□□□□□ -0.6
TFF3-202ENST00000398431 MEP1AQ16819 746 aa11.33□□□□□ -0.6
TFF3-202ENST00000398431 RNFT1Q5M7Z0 435 aa11.33□□□□□ -0.6
TFF3-202ENST00000398431 THEMIS2Q5TEJ8 643 aa11.33□□□□□ -0.6
TFF3-202ENST00000398431 ZNF468Q5VIY5 522 aaPredicted RBP11.33□□□□□ -0.6
TFF3-202ENST00000398431 GSTA5Q7RTV2 222 aa11.33□□□□□ -0.6
TFF3-202ENST00000398431 SLC26A11Q86WA9 606 aa11.33□□□□□ -0.6
TFF3-202ENST00000398431 AGGF1Q8N302 714 aaeCLIP11.33□□□□□ -0.6
TFF3-202ENST00000398431 ACBD4Q8NC06 268 aa11.33□□□□□ -0.6
TFF3-202ENST00000398431 MNS1Q8NEH6 495 aa11.33□□□□□ -0.6
TFF3-202ENST00000398431 CD200R1Q8TD46 325 aa11.33□□□□□ -0.6
TFF3-202ENST00000398431 KCNJ9Q92806 393 aa11.33□□□□□ -0.6
TFF3-202ENST00000398431 MTFMTQ96DP5 389 aaKnown RBP11.33□□□□□ -0.6
TFF3-202ENST00000398431 THAP11Q96EK4 314 aa11.33□□□□□ -0.6
TFF3-202ENST00000398431 FRMD6Q96NE9 622 aa11.33□□□□□ -0.6
TFF3-202ENST00000398431 GPR21Q99679 349 aa11.33□□□□□ -0.6
TFF3-202ENST00000398431 TSPAN10Q9H1Z9 355 aaPredicted RBP11.33□□□□□ -0.6
TFF3-202ENST00000398431 FBXO6Q9NRD1 293 aaPredicted RBP11.33□□□□□ -0.6
TFF3-202ENST00000398431 LANCL2Q9NS86 450 aa11.33□□□□□ -0.6
TFF3-202ENST00000398431 ARGLU1Q9NWB6 273 aaPredicted RBP11.33□□□□□ -0.6
TFF3-202ENST00000398431 NPIPA1Q9UND3 350 aa11.33□□□□□ -0.6
TFF3-202ENST00000398431 MEMO1Q9Y316 297 aa11.33□□□□□ -0.6
TFF3-202ENST00000398431 MED13LQ71F56 2210 aa11.32□□□□□ -0.6
TFF3-202ENST00000398431 C2CD3Q4AC94 2353 aa11.32□□□□□ -0.6
TFF3-202ENST00000398431 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP11.32□□□□□ -0.6
TFF3-202ENST00000398431 FEZF1A0PJY2 475 aa11.32□□□□□ -0.6
TFF3-202ENST00000398431 FAM227AF5H4B4 570 aa11.32□□□□□ -0.6
TFF3-202ENST00000398431 ADAM10O14672 748 aa11.32□□□□□ -0.6
TFF3-202ENST00000398431 ASNA1O43681 348 aa11.32□□□□□ -0.6
TFF3-202ENST00000398431 KIF5CO60282 957 aa11.32□□□□□ -0.6
TFF3-202ENST00000398431 HAUS5O94927 633 aa11.32□□□□□ -0.6
TFF3-202ENST00000398431 FGGP02679 453 aa11.32□□□□□ -0.6
TFF3-202ENST00000398431 SP1P08047 785 aa11.32□□□□□ -0.6
TFF3-202ENST00000398431 ESRRAP11474 423 aaPredicted RBP11.32□□□□□ -0.6
TFF3-202ENST00000398431 ENO3P13929 434 aaPredicted RBP11.32□□□□□ -0.6
TFF3-202ENST00000398431 CASQ1P31415 396 aa11.32□□□□□ -0.6
TFF3-202ENST00000398431 AGTR2P50052 363 aa11.32□□□□□ -0.6
TFF3-202ENST00000398431 SMSP52788 366 aa11.32□□□□□ -0.6
TFF3-202ENST00000398431 RIPPLY3P57055 190 aa11.32□□□□□ -0.6
TFF3-202ENST00000398431 ALDH6A1Q02252 535 aaKnown RBP11.32□□□□□ -0.6
TFF3-202ENST00000398431 DHX34Q14147 1143 aaKnown RBP11.32□□□□□ -0.6
TFF3-202ENST00000398431 TESK1Q15569 626 aa11.32□□□□□ -0.6
TFF3-202ENST00000398431 EXT1Q16394 746 aa11.32□□□□□ -0.6
TFF3-202ENST00000398431 TTLL9Q3SXZ7 439 aa11.32□□□□□ -0.6
TFF3-202ENST00000398431 SFT2D3Q587I9 215 aa11.32□□□□□ -0.6
TFF3-202ENST00000398431 MFSD4BQ5TF39 518 aa11.32□□□□□ -0.6
TFF3-202ENST00000398431 ARMC3Q5W041 872 aa11.32□□□□□ -0.6
TFF3-202ENST00000398431 ZNF470Q6ECI4 717 aa11.32□□□□□ -0.6
TFF3-202ENST00000398431 PAPD4Q6PIY7 484 aaKnown RBP11.32□□□□□ -0.6
TFF3-202ENST00000398431 SYT10Q6XYQ8 523 aa11.32□□□□□ -0.6
TFF3-202ENST00000398431 UBE2R2Q712K3 238 aaPredicted RBP11.32□□□□□ -0.6
TFF3-202ENST00000398431 PIWIL4Q7Z3Z4 852 aaKnown RBP11.32□□□□□ -0.6
TFF3-202ENST00000398431 GALNTL5Q7Z4T8 443 aa11.32□□□□□ -0.6
TFF3-202ENST00000398431 FGD2Q7Z6J4 655 aa11.32□□□□□ -0.6
TFF3-202ENST00000398431 PNPLA5Q7Z6Z6 429 aaPredicted RBP11.32□□□□□ -0.6
TFF3-202ENST00000398431 ZNF227Q86WZ6 799 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms