RNA–Protein interactions for RNA: ENST00000398022.6

TM9SF4-202, Transcript of transmembrane 9 superfamily member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TM9SF4, Length 3,978 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4-202ENST00000398022 SAP130Q9H0E3 1048 aa6.38□□□□□ -1.39
TM9SF4-202ENST00000398022 XYLT2Q9H1B5 865 aa6.38□□□□□ -1.39
TM9SF4-202ENST00000398022 FAM124BQ9H5Z6 455 aaPredicted RBP6.38□□□□□ -1.39
TM9SF4-202ENST00000398022 GLOD4Q9HC38 313 aa6.38□□□□□ -1.39
TM9SF4-202ENST00000398022 GPN3Q9UHW5 284 aaPredicted RBP6.38□□□□□ -1.39
TM9SF4-202ENST00000398022 C2CD4BA6NLJ0 364 aa6.38□□□□□ -1.39
TM9SF4-202ENST00000398022 MEI4A8MW99 385 aa6.38□□□□□ -1.39
TM9SF4-202ENST00000398022 ARVCFO00192 962 aa6.38□□□□□ -1.39
TM9SF4-202ENST00000398022 FOXE1O00358 373 aaPredicted RBP6.38□□□□□ -1.39
TM9SF4-202ENST00000398022 INSIG1O15503 277 aa6.38□□□□□ -1.39
TM9SF4-202ENST00000398022 NUAK1O60285 661 aa6.38□□□□□ -1.39
TM9SF4-202ENST00000398022 FBP1P09467 338 aa6.38□□□□□ -1.39
TM9SF4-202ENST00000398022 SBK2P0C263 348 aa6.38□□□□□ -1.39
TM9SF4-202ENST00000398022 SLC2A1P11166 492 aa6.38□□□□□ -1.39
TM9SF4-202ENST00000398022 GCH1P30793 250 aa6.38□□□□□ -1.39
TM9SF4-202ENST00000398022 CYP2C18P33260 490 aa6.38□□□□□ -1.39
TM9SF4-202ENST00000398022 SLC25A3Q00325 362 aa6.38□□□□□ -1.39
TM9SF4-202ENST00000398022 MFSD13AQ14CX5 517 aa6.38□□□□□ -1.39
TM9SF4-202ENST00000398022 NHSL2Q5HYW2 709 aa6.38□□□□□ -1.39
TM9SF4-202ENST00000398022 AGAP7PQ5VUJ5 663 aa6.38□□□□□ -1.39
TM9SF4-202ENST00000398022 ZCCHC23Q6ZST2 131 aa6.38□□□□□ -1.39
TM9SF4-202ENST00000398022 MOGAT3Q86VF5 341 aa6.38□□□□□ -1.39
TM9SF4-202ENST00000398022 ERI1Q8IV48 349 aaKnown RBP6.38□□□□□ -1.39
TM9SF4-202ENST00000398022 ZNF511Q8NB15 262 aa6.38□□□□□ -1.39
TM9SF4-202ENST00000398022 POGLUT1Q8NBL1 392 aa6.38□□□□□ -1.39
TM9SF4-202ENST00000398022 GDPD5Q8WTR4 605 aa6.38□□□□□ -1.39
TM9SF4-202ENST00000398022 CCDC120Q96HB5 630 aa6.38□□□□□ -1.39
TM9SF4-202ENST00000398022 BTBD9Q96Q07 612 aa6.38□□□□□ -1.39
TM9SF4-202ENST00000398022 TMEM175Q9BSA9 504 aa6.38□□□□□ -1.39
TM9SF4-202ENST00000398022 BCO2Q9BYV7 579 aa6.38□□□□□ -1.39
TM9SF4-202ENST00000398022 CEP41Q9BYV8 373 aa6.38□□□□□ -1.39
TM9SF4-202ENST00000398022 CNTD2Q9H8S5 307 aa6.38□□□□□ -1.39
TM9SF4-202ENST00000398022 NCDNQ9UBB6 729 aa6.38□□□□□ -1.39
TM9SF4-202ENST00000398022 BTNL2Q9UIR0 455 aa6.38□□□□□ -1.39
TM9SF4-202ENST00000398022 PPM1HQ9ULR3 514 aa6.38□□□□□ -1.39
TM9SF4-202ENST00000398022 RNF215Q9Y6U7 377 aa6.38□□□□□ -1.39
TM9SF4-202ENST00000398022 TMEM238C9JI98 176 aa6.38□□□□□ -1.39
TM9SF4-202ENST00000398022 TFECO14948 347 aaPredicted RBP6.38□□□□□ -1.39
TM9SF4-202ENST00000398022 SUV39H1O43463 412 aa6.38□□□□□ -1.39
TM9SF4-202ENST00000398022 CILPO75339 1184 aa6.38□□□□□ -1.39
TM9SF4-202ENST00000398022 ATE1O95260 518 aa6.38□□□□□ -1.39
TM9SF4-202ENST00000398022 SERPINA3P01011 423 aa6.38□□□□□ -1.39
TM9SF4-202ENST00000398022 STAG3L2P0CL84 134 aa6.38□□□□□ -1.39
TM9SF4-202ENST00000398022 LAP3P28838 519 aa6.38□□□□□ -1.39
TM9SF4-202ENST00000398022 MPIP34949 423 aa6.38□□□□□ -1.39
TM9SF4-202ENST00000398022 ARL4AP40617 200 aa6.38□□□□□ -1.39
TM9SF4-202ENST00000398022 ENTPD1P49961 510 aa6.38□□□□□ -1.39
TM9SF4-202ENST00000398022 HMGCS2P54868 508 aa6.38□□□□□ -1.39
TM9SF4-202ENST00000398022 CDH8P55286 799 aa6.38□□□□□ -1.39
TM9SF4-202ENST00000398022 HTRA4P83105 476 aaPredicted RBP6.38□□□□□ -1.39
TM9SF4-202ENST00000398022 ARMCX4Q5H9R4 360 aa6.38□□□□□ -1.39
TM9SF4-202ENST00000398022 GPR107Q5VW38 600 aa6.38□□□□□ -1.39
TM9SF4-202ENST00000398022 CYS1Q717R9 158 aa6.38□□□□□ -1.39
TM9SF4-202ENST00000398022 GDPD3Q7L5L3 318 aa6.38□□□□□ -1.39
TM9SF4-202ENST00000398022 GPR137CQ8N3F9 429 aa6.38□□□□□ -1.39
TM9SF4-202ENST00000398022 TWNKQ96RR1 684 aa6.38□□□□□ -1.39
TM9SF4-202ENST00000398022 NT5C1AQ9BXI3 368 aa6.38□□□□□ -1.39
TM9SF4-202ENST00000398022 GAL3ST2Q9H3Q3 398 aa6.38□□□□□ -1.39
TM9SF4-202ENST00000398022 POFUT1Q9H488 388 aa6.38□□□□□ -1.39
TM9SF4-202ENST00000398022 NGBQ9NPG2 151 aa6.38□□□□□ -1.39
TM9SF4-202ENST00000398022 DNAJC28Q9NX36 388 aa6.38□□□□□ -1.39
TM9SF4-202ENST00000398022 ZDHHC7Q9NXF8 308 aa6.38□□□□□ -1.39
TM9SF4-202ENST00000398022 B3GNT3Q9Y2A9 372 aa6.38□□□□□ -1.39
TM9SF4-202ENST00000398022 WDR81Q562E7 1941 aa6.38□□□□□ -1.39
TM9SF4-202ENST00000398022 LOC110117498-PIK3R3F6TDL0 507 aa6.37□□□□□ -1.39
TM9SF4-202ENST00000398022 KLK3P07288 261 aaPredicted RBP6.37□□□□□ -1.39
TM9SF4-202ENST00000398022 PRDX6P30041 224 aa6.37□□□□□ -1.39
TM9SF4-202ENST00000398022 BDKRB2P30411 391 aa6.37□□□□□ -1.39
TM9SF4-202ENST00000398022 SMSP52788 366 aa6.37□□□□□ -1.39
TM9SF4-202ENST00000398022 NDST2P52849 883 aa6.37□□□□□ -1.39
TM9SF4-202ENST00000398022 TPTEP56180 551 aa6.37□□□□□ -1.39
TM9SF4-202ENST00000398022 SELENBP1Q13228 472 aa6.37□□□□□ -1.39
TM9SF4-202ENST00000398022 CRHR2Q13324 411 aa6.37□□□□□ -1.39
TM9SF4-202ENST00000398022 GRIN2CQ14957 1233 aa6.37□□□□□ -1.39
TM9SF4-202ENST00000398022 IRF4Q15306 451 aa6.37□□□□□ -1.39
TM9SF4-202ENST00000398022 PDZK1Q5T2W1 519 aa6.37□□□□□ -1.39
TM9SF4-202ENST00000398022 LIPJQ5W064 366 aa6.37□□□□□ -1.39
TM9SF4-202ENST00000398022 ELP2Q6IA86 826 aa6.37□□□□□ -1.39
TM9SF4-202ENST00000398022 GPR153Q6NV75 609 aa6.37□□□□□ -1.39
TM9SF4-202ENST00000398022 PMF1Q6P1K2 205 aa6.37□□□□□ -1.39
TM9SF4-202ENST00000398022 POTEHQ6S545 545 aa6.37□□□□□ -1.39
TM9SF4-202ENST00000398022 NPSR1Q6W5P4 371 aa6.37□□□□□ -1.39
TM9SF4-202ENST00000398022 PLEKHG7Q6ZR37 379 aa6.37□□□□□ -1.39
TM9SF4-202ENST00000398022 PDSS2Q86YH6 399 aa6.37□□□□□ -1.39
TM9SF4-202ENST00000398022 DEFB107AQ8IZN7 70 aa6.37□□□□□ -1.39
TM9SF4-202ENST00000398022 SCML4Q8N228 414 aa6.37□□□□□ -1.39
TM9SF4-202ENST00000398022 MRPL38Q96DV4 380 aaKnown RBP6.37□□□□□ -1.39
TM9SF4-202ENST00000398022 DUSP22Q9NRW4 184 aa6.37□□□□□ -1.39
TM9SF4-202ENST00000398022 SLC38A7Q9NVC3 462 aa6.37□□□□□ -1.39
TM9SF4-202ENST00000398022 ZNF214Q9UL59 606 aaPredicted RBP6.37□□□□□ -1.39
TM9SF4-202ENST00000398022 RAB23Q9ULC3 237 aa6.37□□□□□ -1.39
TM9SF4-202ENST00000398022 MGAT4AQ9UM21 535 aa6.37□□□□□ -1.39
TM9SF4-202ENST00000398022 ADAMTS5Q9UNA0 930 aa6.37□□□□□ -1.39
TM9SF4-202ENST00000398022 ERVW-1Q9UQF0 538 aa6.37□□□□□ -1.39
TM9SF4-202ENST00000398022 PTPRSQ13332 1948 aa6.37□□□□□ -1.39
TM9SF4-202ENST00000398022 ATG2AQ2TAZ0 1938 aa6.37□□□□□ -1.39
TM9SF4-202ENST00000398022 ZNF487B1APH4 448 aa6.37□□□□□ -1.39
TM9SF4-202ENST00000398022 MDM4O15151 490 aa6.37□□□□□ -1.39
TM9SF4-202ENST00000398022 PSMD3O43242 534 aa6.37□□□□□ -1.39
TM9SF4-202ENST00000398022 GRAP2O75791 330 aa6.37□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms