RNA–Protein interactions for RNA: ENST00000397901.7

CHMP1A-201, Transcript of charged multivesicular body protein 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP1A, Length 2,483 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-201ENST00000397901 IPCEF1Q8WWN9 437 aaPredicted RBP15.45■□□□□ 0.06
CHMP1A-201ENST00000397901 ELMO1Q92556 727 aa15.45■□□□□ 0.06
CHMP1A-201ENST00000397901 FYTTD1Q96QD9 318 aaKnown RBP15.45■□□□□ 0.06
CHMP1A-201ENST00000397901 FCF1Q9Y324 198 aaKnown RBP15.45■□□□□ 0.06
CHMP1A-201ENST00000397901 PLXNA4Q9HCM2 1894 aa15.45■□□□□ 0.06
CHMP1A-201ENST00000397901 SLITRK5O94991 958 aa15.45■□□□□ 0.06
CHMP1A-201ENST00000397901 PDYNP01213 254 aa15.45■□□□□ 0.06
CHMP1A-201ENST00000397901 ZDHHC11BP0C7U3 371 aa15.45■□□□□ 0.06
CHMP1A-201ENST00000397901 DGKAP23743 735 aa15.45■□□□□ 0.06
CHMP1A-201ENST00000397901 GADD45AP24522 165 aa15.45■□□□□ 0.06
CHMP1A-201ENST00000397901 EIF2B5Q13144 721 aaKnown RBP15.45■□□□□ 0.06
CHMP1A-201ENST00000397901 KEAP1Q14145 624 aa15.45■□□□□ 0.06
CHMP1A-201ENST00000397901 SYT16Q17RD7 645 aa15.45■□□□□ 0.06
CHMP1A-201ENST00000397901 PXDC1Q5TGL8 231 aa15.45■□□□□ 0.06
CHMP1A-201ENST00000397901 SDE2Q6IQ49 451 aa15.45■□□□□ 0.06
CHMP1A-201ENST00000397901 CAPN13Q6MZZ7 669 aaPredicted RBP15.45■□□□□ 0.06
CHMP1A-201ENST00000397901 VTCN1Q7Z7D3 282 aa15.45■□□□□ 0.06
CHMP1A-201ENST00000397901 OR8H2Q8N162 312 aa15.45■□□□□ 0.06
CHMP1A-201ENST00000397901 PAF1Q8N7H5 531 aa15.45■□□□□ 0.06
CHMP1A-201ENST00000397901 PDP1Q9P0J1 537 aaPredicted RBP15.45■□□□□ 0.06
CHMP1A-201ENST00000397901 TRPS1Q9UHF7 1281 aa15.45■□□□□ 0.06
CHMP1A-201ENST00000397901 PPT2Q9UMR5 302 aa15.45■□□□□ 0.06
CHMP1A-201ENST00000397901 ERVW-1Q9UQF0 538 aa15.45■□□□□ 0.06
CHMP1A-201ENST00000397901 AP3M1Q9Y2T2 418 aa15.45■□□□□ 0.06
CHMP1A-201ENST00000397901 SLC38A8A6NNN8 435 aa15.44■□□□□ 0.06
CHMP1A-201ENST00000397901 A8MX80 341 aa15.44■□□□□ 0.06
CHMP1A-201ENST00000397901 LEUTXA8MZ59 168 aa15.44■□□□□ 0.06
CHMP1A-201ENST00000397901 SYN3O14994 580 aa15.44■□□□□ 0.06
CHMP1A-201ENST00000397901 AOC2O75106 756 aa15.44■□□□□ 0.06
CHMP1A-201ENST00000397901 WDR47O94967 919 aa15.44■□□□□ 0.06
CHMP1A-201ENST00000397901 EBLN1P0CF75 366 aa15.44■□□□□ 0.06
CHMP1A-201ENST00000397901 CORO1AP31146 461 aaKnown RBP15.44■□□□□ 0.06
CHMP1A-201ENST00000397901 UQCRC1P31930 480 aa15.44■□□□□ 0.06
CHMP1A-201ENST00000397901 KRT20P35900 424 aa15.44■□□□□ 0.06
CHMP1A-201ENST00000397901 MAGEA2P43356 314 aa15.44■□□□□ 0.06
CHMP1A-201ENST00000397901 ARHGDIAP52565 204 aa15.44■□□□□ 0.06
CHMP1A-201ENST00000397901 ATN1P54259 1190 aaPredicted RBP15.44■□□□□ 0.06
CHMP1A-201ENST00000397901 SLAMF1Q13291 335 aa15.44■□□□□ 0.06
CHMP1A-201ENST00000397901 LRIF1Q5T3J3 769 aa15.44■□□□□ 0.06
CHMP1A-201ENST00000397901 DPY19L3Q6ZPD9 716 aa15.44■□□□□ 0.06
CHMP1A-201ENST00000397901 AHSA2Q719I0 299 aa15.44■□□□□ 0.06
CHMP1A-201ENST00000397901 ZBTB2Q8N680 514 aa15.44■□□□□ 0.06
CHMP1A-201ENST00000397901 GALNT6Q8NCL4 622 aa15.44■□□□□ 0.06
CHMP1A-201ENST00000397901 USP7Q93009 1102 aa15.44■□□□□ 0.06
CHMP1A-201ENST00000397901 PRDM8Q9NQV8 689 aa15.44■□□□□ 0.06
CHMP1A-201ENST00000397901 KIF17Q9P2E2 1029 aa15.44■□□□□ 0.06
CHMP1A-201ENST00000397901 AFF4Q9UHB7 1163 aaKnown RBP15.44■□□□□ 0.06
CHMP1A-201ENST00000397901 VPS4AQ9UN37 437 aa15.44■□□□□ 0.06
CHMP1A-201ENST00000397901 WNT9AO14904 365 aa15.44■□□□□ 0.06
CHMP1A-201ENST00000397901 ATF6P18850 670 aa15.44■□□□□ 0.06
CHMP1A-201ENST00000397901 PTPN6P29350 595 aa15.44■□□□□ 0.06
CHMP1A-201ENST00000397901 HMGCLP35914 325 aa15.44■□□□□ 0.06
CHMP1A-201ENST00000397901 RFX2P48378 723 aa15.44■□□□□ 0.06
CHMP1A-201ENST00000397901 ABHD18Q0P651 414 aa15.44■□□□□ 0.06
CHMP1A-201ENST00000397901 FAPQ12884 760 aa15.44■□□□□ 0.06
CHMP1A-201ENST00000397901 FAM214AQ32MH5 1076 aa15.44■□□□□ 0.06
CHMP1A-201ENST00000397901 ARMC4Q5T2S8 1044 aa15.44■□□□□ 0.06
CHMP1A-201ENST00000397901 KDM4DQ6B0I6 523 aa15.44■□□□□ 0.06
CHMP1A-201ENST00000397901 SNX20Q7Z614 316 aa15.44■□□□□ 0.06
CHMP1A-201ENST00000397901 PHF6Q8IWS0 365 aaKnown RBP eCLIP15.44■□□□□ 0.06
CHMP1A-201ENST00000397901 RBFAQ8N0V3 343 aa15.44■□□□□ 0.06
CHMP1A-201ENST00000397901 TCAIMQ8N3R3 496 aa15.44■□□□□ 0.06
CHMP1A-201ENST00000397901 FLCNQ8NFG4 579 aa15.44■□□□□ 0.06
CHMP1A-201ENST00000397901 LRRC20Q8TCA0 184 aa15.44■□□□□ 0.06
CHMP1A-201ENST00000397901 SELENOMQ8WWX9 145 aa15.44■□□□□ 0.06
CHMP1A-201ENST00000397901 C17orf62Q9BQA9 187 aa15.44■□□□□ 0.06
CHMP1A-201ENST00000397901 NTMT1Q9BV86 223 aa15.44■□□□□ 0.06
CHMP1A-201ENST00000397901 C2orf49Q9BVC5 232 aaPredicted RBP15.44■□□□□ 0.06
CHMP1A-201ENST00000397901 TM6SF2Q9BZW4 377 aa15.44■□□□□ 0.06
CHMP1A-201ENST00000397901 HCSTQ9UBK5 93 aa15.44■□□□□ 0.06
CHMP1A-201ENST00000397901 LHX3Q9UBR4 397 aa15.44■□□□□ 0.06
CHMP1A-201ENST00000397901 TEKT2Q9UIF3 430 aa15.44■□□□□ 0.06
CHMP1A-201ENST00000397901 SAMD4AQ9UPU9 718 aaKnown RBP15.44■□□□□ 0.06
CHMP1A-201ENST00000397901 A0A1W2PQ45 241 aaPredicted RBP15.43■□□□□ 0.06
CHMP1A-201ENST00000397901 A0A1W2PQY0 241 aa15.43■□□□□ 0.06
CHMP1A-201ENST00000397901 OR6C75A6NL08 312 aa15.43■□□□□ 0.06
CHMP1A-201ENST00000397901 GAPDHSO14556 408 aaPredicted RBP15.43■□□□□ 0.06
CHMP1A-201ENST00000397901 RFXANKO14593 260 aa15.43■□□□□ 0.06
CHMP1A-201ENST00000397901 NBNO60934 754 aa15.43■□□□□ 0.06
CHMP1A-201ENST00000397901 STK16O75716 305 aa15.43■□□□□ 0.06
CHMP1A-201ENST00000397901 RPLP0P05388 317 aaKnown RBP15.43■□□□□ 0.06
CHMP1A-201ENST00000397901 NAT2P11245 290 aa15.43■□□□□ 0.06
CHMP1A-201ENST00000397901 CLDN8P56748 225 aa15.43■□□□□ 0.06
CHMP1A-201ENST00000397901 RHOAP61586 193 aa15.43■□□□□ 0.06
CHMP1A-201ENST00000397901 POU6F2P78424 691 aaPredicted RBP15.43■□□□□ 0.06
CHMP1A-201ENST00000397901 MAD2L1BPQ15013 274 aaPredicted RBP15.43■□□□□ 0.06
CHMP1A-201ENST00000397901 TOR2AQ5JU69 321 aa15.43■□□□□ 0.06
CHMP1A-201ENST00000397901 OR4F3Q6IEY1 312 aa15.43■□□□□ 0.06
CHMP1A-201ENST00000397901 CXorf57Q6NSI4 855 aaKnown RBP15.43■□□□□ 0.06
CHMP1A-201ENST00000397901 CERS6Q6ZMG9 384 aa15.43■□□□□ 0.06
CHMP1A-201ENST00000397901 ATG16L2Q8NAA4 619 aa15.43■□□□□ 0.06
CHMP1A-201ENST00000397901 WBP2Q969T9 261 aa15.43■□□□□ 0.06
CHMP1A-201ENST00000397901 GABARAPL1Q9H0R8 117 aa15.43■□□□□ 0.06
CHMP1A-201ENST00000397901 ERVK13-1Q9NX77 482 aa15.43■□□□□ 0.06
CHMP1A-201ENST00000397901 ASIC5Q9NY37 505 aa15.43■□□□□ 0.06
CHMP1A-201ENST00000397901 MAN2B2Q9Y2E5 1009 aa15.43■□□□□ 0.06
CHMP1A-201ENST00000397901 HCN4Q9Y3Q4 1203 aa15.43■□□□□ 0.06
CHMP1A-201ENST00000397901 SAMHD1Q9Y3Z3 626 aaKnown RBP15.43■□□□□ 0.06
CHMP1A-201ENST00000397901 TRIM77I1YAP6 450 aa15.43■□□□□ 0.06
CHMP1A-201ENST00000397901 PLK4O00444 970 aa15.43■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms