RNA–Protein interactions for RNA: ENST00000397611.7

PTPRD-205, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 5 BASIC

Gene PTPRD, Length 8,242 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-205ENST00000397611 PPIEQ9UNP9 301 aaKnown RBP5.28□□□□□ -1.56
PTPRD-205ENST00000397611 LRRC37A2A6NM11 1700 aa5.28□□□□□ -1.56
PTPRD-205ENST00000397611 AP3D1O14617 1153 aa5.28□□□□□ -1.56
PTPRD-205ENST00000397611 MID1O15344 667 aa5.28□□□□□ -1.56
PTPRD-205ENST00000397611 KDELR3O43731 214 aa5.28□□□□□ -1.56
PTPRD-205ENST00000397611 HRH2P25021 359 aa5.28□□□□□ -1.56
PTPRD-205ENST00000397611 KDELR2P33947 212 aa5.28□□□□□ -1.56
PTPRD-205ENST00000397611 UGT2B10P36537 528 aa5.28□□□□□ -1.56
PTPRD-205ENST00000397611 ZNF45Q02386 682 aa5.28□□□□□ -1.56
PTPRD-205ENST00000397611 CSTF1Q05048 431 aaKnown RBP5.28□□□□□ -1.56
PTPRD-205ENST00000397611 GALNT3Q14435 633 aa5.28□□□□□ -1.56
PTPRD-205ENST00000397611 PPP1R3AQ16821 1122 aa5.28□□□□□ -1.56
PTPRD-205ENST00000397611 NDUFAF6Q330K2 333 aa5.28□□□□□ -1.56
PTPRD-205ENST00000397611 DPY19L3Q6ZPD9 716 aa5.28□□□□□ -1.56
PTPRD-205ENST00000397611 USP30Q70CQ3 517 aa5.28□□□□□ -1.56
PTPRD-205ENST00000397611 ZZZ3Q8IYH5 903 aa5.28□□□□□ -1.56
PTPRD-205ENST00000397611 GHDCQ8N2G8 530 aa5.28□□□□□ -1.56
PTPRD-205ENST00000397611 TSSK3Q96PN8 268 aa5.28□□□□□ -1.56
PTPRD-205ENST00000397611 ZNF300Q96RE9 604 aaPredicted RBP5.28□□□□□ -1.56
PTPRD-205ENST00000397611 TCF25Q9BQ70 676 aa5.28□□□□□ -1.56
PTPRD-205ENST00000397611 THG1LQ9NWX6 298 aaKnown RBP5.28□□□□□ -1.56
PTPRD-205ENST00000397611 TAS2R9Q9NYW1 312 aa5.28□□□□□ -1.56
PTPRD-205ENST00000397611 NUP205Q92621 2012 aa5.28□□□□□ -1.56
PTPRD-205ENST00000397611 CBX4O00257 560 aa5.28□□□□□ -1.56
PTPRD-205ENST00000397611 MT-ND2P03891 347 aa5.28□□□□□ -1.56
PTPRD-205ENST00000397611 GPR15P49685 360 aa5.28□□□□□ -1.56
PTPRD-205ENST00000397611 MGAT3Q09327 533 aa5.28□□□□□ -1.56
PTPRD-205ENST00000397611 OLIG2Q13516 323 aa5.28□□□□□ -1.56
PTPRD-205ENST00000397611 VMACQ2NL98 169 aa5.28□□□□□ -1.56
PTPRD-205ENST00000397611 CRTC2Q53ET0 693 aaPredicted RBP5.28□□□□□ -1.56
PTPRD-205ENST00000397611 PAGE3Q5JUK9 113 aa5.28□□□□□ -1.56
PTPRD-205ENST00000397611 IDNKQ5T6J7 187 aa5.28□□□□□ -1.56
PTPRD-205ENST00000397611 C10orf53Q8N6V4 93 aa5.28□□□□□ -1.56
PTPRD-205ENST00000397611 VANGL1Q8TAA9 524 aaPredicted RBP5.28□□□□□ -1.56
PTPRD-205ENST00000397611 DEDD2Q8WXF8 326 aa5.28□□□□□ -1.56
PTPRD-205ENST00000397611 MNTQ99583 582 aa5.28□□□□□ -1.56
PTPRD-205ENST00000397611 CPPED1Q9BRF8 314 aaPredicted RBP5.28□□□□□ -1.56
PTPRD-205ENST00000397611 DPCDQ9BVM2 203 aaPredicted RBP5.28□□□□□ -1.56
PTPRD-205ENST00000397611 PPIL3Q9H2H8 161 aaKnown RBP5.28□□□□□ -1.56
PTPRD-205ENST00000397611 ANKRA2Q9H9E1 313 aa5.28□□□□□ -1.56
PTPRD-205ENST00000397611 TBC1D17Q9HA65 648 aa5.28□□□□□ -1.56
PTPRD-205ENST00000397611 IL1RAPQ9NPH3 570 aa5.28□□□□□ -1.56
PTPRD-205ENST00000397611 ERVK13-1Q9NX77 482 aa5.28□□□□□ -1.56
PTPRD-205ENST00000397611 NDRG4Q9ULP0 352 aaKnown RBP5.28□□□□□ -1.56
PTPRD-205ENST00000397611 CMAHPQ9Y471 501 aa5.28□□□□□ -1.56
PTPRD-205ENST00000397611 RALGAPA2Q2PPJ7 1873 aa5.28□□□□□ -1.56
PTPRD-205ENST00000397611 A0A075B6Q4 140 aa5.28□□□□□ -1.56
PTPRD-205ENST00000397611 SCN2BO60939 215 aa5.28□□□□□ -1.56
PTPRD-205ENST00000397611 STX11O75558 287 aa5.28□□□□□ -1.56
PTPRD-205ENST00000397611 NNMTP40261 264 aa5.28□□□□□ -1.56
PTPRD-205ENST00000397611 EIF2B5Q13144 721 aaKnown RBP5.28□□□□□ -1.56
PTPRD-205ENST00000397611 SHQ1Q6PI26 577 aaKnown RBP5.28□□□□□ -1.56
PTPRD-205ENST00000397611 CXXC5Q7LFL8 322 aaKnown RBP5.28□□□□□ -1.56
PTPRD-205ENST00000397611 ANKRD46Q86W74 232 aa5.28□□□□□ -1.56
PTPRD-205ENST00000397611 OR6Q1Q8NGQ2 317 aa5.28□□□□□ -1.56
PTPRD-205ENST00000397611 RHBDF1Q96CC6 855 aa5.28□□□□□ -1.56
PTPRD-205ENST00000397611 HMCESQ96FZ2 354 aa5.28□□□□□ -1.56
PTPRD-205ENST00000397611 SH3YL1Q96HL8 342 aaPredicted RBP5.28□□□□□ -1.56
PTPRD-205ENST00000397611 UCK2Q9BZX2 261 aa5.28□□□□□ -1.56
PTPRD-205ENST00000397611 CLMPQ9H6B4 373 aa5.28□□□□□ -1.56
PTPRD-205ENST00000397611 AKIP1Q9NQ31 210 aa5.28□□□□□ -1.56
PTPRD-205ENST00000397611 KCTD5Q9NXV2 234 aa5.28□□□□□ -1.56
PTPRD-205ENST00000397611 SEC14L4Q9UDX3 406 aa5.28□□□□□ -1.56
PTPRD-205ENST00000397611 TBC1D24Q9ULP9 559 aa5.28□□□□□ -1.56
PTPRD-205ENST00000397611 SLC1A7O00341 560 aa5.28□□□□□ -1.56
PTPRD-205ENST00000397611 FFAR2O15552 330 aa5.28□□□□□ -1.56
PTPRD-205ENST00000397611 SGTAO43765 313 aa5.28□□□□□ -1.56
PTPRD-205ENST00000397611 DFNA5O60443 496 aa5.28□□□□□ -1.56
PTPRD-205ENST00000397611 MPZL2O60487 215 aa5.28□□□□□ -1.56
PTPRD-205ENST00000397611 SULT1C4O75897 302 aa5.28□□□□□ -1.56
PTPRD-205ENST00000397611 OR4F21O95013 312 aa5.28□□□□□ -1.56
PTPRD-205ENST00000397611 HNMTP50135 292 aa5.28□□□□□ -1.56
PTPRD-205ENST00000397611 RPS14P62263 151 aaKnown RBP5.28□□□□□ -1.56
PTPRD-205ENST00000397611 SF3B4Q15427 424 aaKnown RBP eCLIP5.28□□□□□ -1.56
PTPRD-205ENST00000397611 UGT8Q16880 541 aa5.28□□□□□ -1.56
PTPRD-205ENST00000397611 CAMKMTQ7Z624 323 aa5.28□□□□□ -1.56
PTPRD-205ENST00000397611 PSD4Q8NDX1 1056 aa5.28□□□□□ -1.56
PTPRD-205ENST00000397611 OR4A15Q8NGL6 344 aa5.28□□□□□ -1.56
PTPRD-205ENST00000397611 TMEM203Q969S6 136 aa5.28□□□□□ -1.56
PTPRD-205ENST00000397611 LINGO1Q96FE5 620 aa5.28□□□□□ -1.56
PTPRD-205ENST00000397611 TRMT2BQ96GJ1 504 aaKnown RBP5.28□□□□□ -1.56
PTPRD-205ENST00000397611 CTRCQ99895 268 aa5.28□□□□□ -1.56
PTPRD-205ENST00000397611 LRTM1Q9HBL6 345 aa5.28□□□□□ -1.56
PTPRD-205ENST00000397611 SLC35C2Q9NQQ7 365 aa5.28□□□□□ -1.56
PTPRD-205ENST00000397611 FAM118AQ9NWS6 357 aa5.28□□□□□ -1.56
PTPRD-205ENST00000397611 ARL15Q9NXU5 204 aa5.28□□□□□ -1.56
PTPRD-205ENST00000397611 ZNF490Q9ULM2 529 aaPredicted RBP5.28□□□□□ -1.56
PTPRD-205ENST00000397611 ANGPT4Q9Y264 503 aa5.28□□□□□ -1.56
PTPRD-205ENST00000397611 SLITRK5O94991 958 aa5.28□□□□□ -1.56
PTPRD-205ENST00000397611 OR5F1O95221 314 aa5.28□□□□□ -1.56
PTPRD-205ENST00000397611 CTPS1P17812 591 aa5.28□□□□□ -1.56
PTPRD-205ENST00000397611 TNNI3P19429 210 aa5.28□□□□□ -1.56
PTPRD-205ENST00000397611 NSG1P42857 185 aa5.28□□□□□ -1.56
PTPRD-205ENST00000397611 GDI2P50395 445 aaKnown RBP5.28□□□□□ -1.56
PTPRD-205ENST00000397611 CTBSQ01459 385 aa5.28□□□□□ -1.56
PTPRD-205ENST00000397611 SPCS2Q15005 226 aa5.28□□□□□ -1.56
PTPRD-205ENST00000397611 DEFB132Q7Z7B7 95 aa5.28□□□□□ -1.56
PTPRD-205ENST00000397611 LIX1Q8N485 282 aa5.28□□□□□ -1.56
PTPRD-205ENST00000397611 C1orf52Q8N6N3 182 aaKnown RBP5.28□□□□□ -1.56
PTPRD-205ENST00000397611 TANKQ92844 425 aa5.28□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms