RNA–Protein interactions for RNA: ENST00000397200.8

CAPN3-207, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 1,643 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-207ENST00000397200 C1orf50Q9BV19 199 aa14.34□□□□□ -0.11
CAPN3-207ENST00000397200 KLHL4Q9C0H6 718 aa14.34□□□□□ -0.11
CAPN3-207ENST00000397200 LEF1Q9UJU2 399 aaPredicted RBP14.34□□□□□ -0.11
CAPN3-207ENST00000397200 ANGPTL3Q9Y5C1 460 aa14.34□□□□□ -0.11
CAPN3-207ENST00000397200 PCDHA9Q9Y5H5 950 aa14.34□□□□□ -0.11
CAPN3-207ENST00000397200 KCNE1BA0A087WTH5 132 aa14.33□□□□□ -0.11
CAPN3-207ENST00000397200 RHPN2P1A8MT19 583 aa14.33□□□□□ -0.11
CAPN3-207ENST00000397200 PPM1DO15297 605 aa14.33□□□□□ -0.11
CAPN3-207ENST00000397200 FLRT2O43155 660 aa14.33□□□□□ -0.11
CAPN3-207ENST00000397200 RGS14O43566 566 aa14.33□□□□□ -0.11
CAPN3-207ENST00000397200 PKLRP30613 574 aa14.33□□□□□ -0.11
CAPN3-207ENST00000397200 SHMT2P34897 504 aa14.33□□□□□ -0.11
CAPN3-207ENST00000397200 GRK6P43250 576 aa14.33□□□□□ -0.11
CAPN3-207ENST00000397200 POLR2JP52435 117 aaKnown RBP14.33□□□□□ -0.11
CAPN3-207ENST00000397200 PNLIPRP1P54315 467 aa14.33□□□□□ -0.11
CAPN3-207ENST00000397200 ARHGAP19Q14CB8 494 aa14.33□□□□□ -0.11
CAPN3-207ENST00000397200 NR6A1Q15406 480 aa14.33□□□□□ -0.11
CAPN3-207ENST00000397200 NR0B2Q15466 257 aa14.33□□□□□ -0.11
CAPN3-207ENST00000397200 SLC15A3Q8IY34 581 aa14.33□□□□□ -0.11
CAPN3-207ENST00000397200 SYTL1Q8IYJ3 562 aa14.33□□□□□ -0.11
CAPN3-207ENST00000397200 FAM181AQ8N9Y4 354 aa14.33□□□□□ -0.11
CAPN3-207ENST00000397200 ZNF480Q8WV37 535 aa14.33□□□□□ -0.11
CAPN3-207ENST00000397200 JPH3Q8WXH2 748 aaPredicted RBP14.33□□□□□ -0.11
CAPN3-207ENST00000397200 ZUFSPQ96AP4 578 aa14.33□□□□□ -0.11
CAPN3-207ENST00000397200 APOLD1Q96LR9 279 aa14.33□□□□□ -0.11
CAPN3-207ENST00000397200 LDHAL6BQ9BYZ2 381 aaPredicted RBP14.33□□□□□ -0.11
CAPN3-207ENST00000397200 XKR8Q9H6D3 395 aa14.33□□□□□ -0.11
CAPN3-207ENST00000397200 UCK1Q9HA47 277 aa14.33□□□□□ -0.11
CAPN3-207ENST00000397200 RXFP3Q9NSD7 469 aa14.33□□□□□ -0.11
CAPN3-207ENST00000397200 PADI4Q9UM07 663 aa14.33□□□□□ -0.11
CAPN3-207ENST00000397200 ICKQ9UPZ9 632 aa14.33□□□□□ -0.11
CAPN3-207ENST00000397200 SERTM1A2A2V5 107 aa14.33□□□□□ -0.12
CAPN3-207ENST00000397200 C9JVG2 144 aa14.33□□□□□ -0.12
CAPN3-207ENST00000397200 MANBAO00462 879 aa14.33□□□□□ -0.12
CAPN3-207ENST00000397200 NUDT21O43809 227 aaKnown RBP14.33□□□□□ -0.12
CAPN3-207ENST00000397200 CLDN9O95484 217 aa14.33□□□□□ -0.12
CAPN3-207ENST00000397200 ERGP11308 486 aa14.33□□□□□ -0.12
CAPN3-207ENST00000397200 TGM1P22735 817 aa14.33□□□□□ -0.12
CAPN3-207ENST00000397200 PRPH2P23942 346 aa14.33□□□□□ -0.12
CAPN3-207ENST00000397200 NHLH1Q02575 133 aa14.33□□□□□ -0.12
CAPN3-207ENST00000397200 BNIP2Q12982 314 aa14.33□□□□□ -0.12
CAPN3-207ENST00000397200 MAD2L1Q13257 205 aaPredicted RBP14.33□□□□□ -0.12
CAPN3-207ENST00000397200 KIAA0040Q15053 153 aa14.33□□□□□ -0.12
CAPN3-207ENST00000397200 TRIP10Q15642 601 aa14.33□□□□□ -0.12
CAPN3-207ENST00000397200 FXNQ16595 210 aa14.33□□□□□ -0.12
CAPN3-207ENST00000397200 CYP2A13Q16696 494 aa14.33□□□□□ -0.12
CAPN3-207ENST00000397200 AP5B1Q2VPB7 878 aa14.33□□□□□ -0.12
CAPN3-207ENST00000397200 SFT2D3Q587I9 215 aa14.33□□□□□ -0.12
CAPN3-207ENST00000397200 LPCAT4Q643R3 524 aa14.33□□□□□ -0.12
CAPN3-207ENST00000397200 CYP20A1Q6UW02 462 aa14.33□□□□□ -0.12
CAPN3-207ENST00000397200 DBX2Q6ZNG2 339 aa14.33□□□□□ -0.12
CAPN3-207ENST00000397200 AMIGO1Q86WK6 493 aa14.33□□□□□ -0.12
CAPN3-207ENST00000397200 ZNF761Q86XN6 746 aaPredicted RBP14.33□□□□□ -0.12
CAPN3-207ENST00000397200 LILRA2Q8N149 483 aa14.33□□□□□ -0.12
CAPN3-207ENST00000397200 L3MBTL4Q8NA19 623 aa14.33□□□□□ -0.12
CAPN3-207ENST00000397200 GOLM1Q8NBJ4 401 aa14.33□□□□□ -0.12
CAPN3-207ENST00000397200 OR4E2Q8NGC2 313 aa14.33□□□□□ -0.12
CAPN3-207ENST00000397200 TMEM125Q96AQ2 219 aa14.33□□□□□ -0.12
CAPN3-207ENST00000397200 MED8Q96G25 268 aa14.33□□□□□ -0.12
CAPN3-207ENST00000397200 SLC45A3Q96JT2 553 aa14.33□□□□□ -0.12
CAPN3-207ENST00000397200 SLC38A3Q99624 504 aa14.33□□□□□ -0.12
CAPN3-207ENST00000397200 MENTQ9BUN1 341 aa14.33□□□□□ -0.12
CAPN3-207ENST00000397200 ATG10Q9H0Y0 220 aa14.33□□□□□ -0.12
CAPN3-207ENST00000397200 PCDHAC1Q9H158 963 aa14.33□□□□□ -0.12
CAPN3-207ENST00000397200 MUC13Q9H3R2 512 aa14.33□□□□□ -0.12
CAPN3-207ENST00000397200 SRMSQ9H3Y6 488 aa14.33□□□□□ -0.12
CAPN3-207ENST00000397200 CMTM6Q9NX76 183 aa14.33□□□□□ -0.12
CAPN3-207ENST00000397200 LRIT1Q9P2V4 623 aa14.33□□□□□ -0.12
CAPN3-207ENST00000397200 BTBD3Q9Y2F9 522 aa14.33□□□□□ -0.12
CAPN3-207ENST00000397200 RNF11Q9Y3C5 154 aa14.33□□□□□ -0.12
CAPN3-207ENST00000397200 RNF215Q9Y6U7 377 aa14.33□□□□□ -0.12
CAPN3-207ENST00000397200 GOLGA4Q13439 2230 aaKnown RBP14.32□□□□□ -0.12
CAPN3-207ENST00000397200 CCDC154A6NI56 674 aa14.32□□□□□ -0.12
CAPN3-207ENST00000397200 MYF5P13349 255 aa14.32□□□□□ -0.12
CAPN3-207ENST00000397200 GLB1P16278 677 aa14.32□□□□□ -0.12
CAPN3-207ENST00000397200 TCN1P20061 433 aaPredicted RBP14.32□□□□□ -0.12
CAPN3-207ENST00000397200 ARL1P40616 181 aaPredicted RBP14.32□□□□□ -0.12
CAPN3-207ENST00000397200 CLNS1AP54105 237 aaKnown RBP14.32□□□□□ -0.12
CAPN3-207ENST00000397200 KLC1Q07866 573 aa14.32□□□□□ -0.12
CAPN3-207ENST00000397200 NAE1Q13564 534 aa14.32□□□□□ -0.12
CAPN3-207ENST00000397200 TSTA3Q13630 321 aaPredicted RBP14.32□□□□□ -0.12
CAPN3-207ENST00000397200 RFTN2Q52LD8 501 aaPredicted RBP14.32□□□□□ -0.12
CAPN3-207ENST00000397200 PAGE3Q5JUK9 113 aa14.32□□□□□ -0.12
CAPN3-207ENST00000397200 LCN8Q6JVE9 175 aa14.32□□□□□ -0.12
CAPN3-207ENST00000397200 SPATA24Q86W54 205 aa14.32□□□□□ -0.12
CAPN3-207ENST00000397200 TMEM102Q8N9M5 508 aaPredicted RBP14.32□□□□□ -0.12
CAPN3-207ENST00000397200 OR6C4Q8NGE1 309 aa14.32□□□□□ -0.12
CAPN3-207ENST00000397200 OR2L8Q8NGY9 312 aa14.32□□□□□ -0.12
CAPN3-207ENST00000397200 SETD7Q8WTS6 366 aaKnown RBP14.32□□□□□ -0.12
CAPN3-207ENST00000397200 MAGEB10Q96LZ2 347 aaPredicted RBP14.32□□□□□ -0.12
CAPN3-207ENST00000397200 NR1H4Q96RI1 486 aaPredicted RBP14.32□□□□□ -0.12
CAPN3-207ENST00000397200 PHOX2BQ99453 314 aa14.32□□□□□ -0.12
CAPN3-207ENST00000397200 NRTNQ99748 197 aa14.32□□□□□ -0.12
CAPN3-207ENST00000397200 EVA1BQ9NVM1 165 aa14.32□□□□□ -0.12
CAPN3-207ENST00000397200 OR6C2Q9NZP2 312 aa14.32□□□□□ -0.12
CAPN3-207ENST00000397200 POLR3HQ9Y535 204 aaPredicted RBP14.32□□□□□ -0.12
CAPN3-207ENST00000397200 C15orf38-AP3S2A0A0A6YYH1 394 aa14.31□□□□□ -0.12
CAPN3-207ENST00000397200 FAM221BA6H8Z2 402 aa14.31□□□□□ -0.12
CAPN3-207ENST00000397200 LILRA5A6NI73 299 aa14.31□□□□□ -0.12
CAPN3-207ENST00000397200 C4orf47A7E2U8 309 aa14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms