RNA–Protein interactions for RNA: ENST00000397007.8

NUP98-205, Transcript of nucleoporin 98, humanhuman

TSL 1 (best) BASIC

Gene NUP98, Length 3,698 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-205ENST00000397007 PDE7BQ9NP56 450 aa10.1□□□□□ -0.79
NUP98-205ENST00000397007 KCMF1Q9P0J7 381 aa10.1□□□□□ -0.79
NUP98-205ENST00000397007 ADGRE2Q9UHX3 823 aa10.1□□□□□ -0.79
NUP98-205ENST00000397007 KCNE2Q9Y6J6 123 aa10.1□□□□□ -0.79
NUP98-205ENST00000397007 A0A0A6YYD5 115 aa10.09□□□□□ -0.79
NUP98-205ENST00000397007 NCF1BA6NI72 391 aaPredicted RBP10.09□□□□□ -0.79
NUP98-205ENST00000397007 NCF1CA8MVU1 366 aaPredicted RBP10.09□□□□□ -0.79
NUP98-205ENST00000397007 SMIM24O75264 130 aa10.09□□□□□ -0.79
NUP98-205ENST00000397007 MLYCDO95822 493 aa10.09□□□□□ -0.79
NUP98-205ENST00000397007 NCF1P14598 390 aaPredicted RBP10.09□□□□□ -0.79
NUP98-205ENST00000397007 AMD1P17707 334 aa10.09□□□□□ -0.79
NUP98-205ENST00000397007 BSGP35613 385 aa10.09□□□□□ -0.79
NUP98-205ENST00000397007 PPP2R2AP63151 447 aa10.09□□□□□ -0.79
NUP98-205ENST00000397007 ACY1Q03154 408 aa10.09□□□□□ -0.79
NUP98-205ENST00000397007 CEBPEQ15744 281 aa10.09□□□□□ -0.79
NUP98-205ENST00000397007 HKDC1Q2TB90 917 aa10.09□□□□□ -0.79
NUP98-205ENST00000397007 CPZQ66K79 652 aa10.09□□□□□ -0.79
NUP98-205ENST00000397007 CGB2Q6NT52 195 aa10.09□□□□□ -0.79
NUP98-205ENST00000397007 CKAP2Q8WWK9 683 aa10.09□□□□□ -0.79
NUP98-205ENST00000397007 METTL2AQ96IZ6 378 aaKnown RBP10.09□□□□□ -0.79
NUP98-205ENST00000397007 ASIC5Q9NY37 505 aa10.09□□□□□ -0.79
NUP98-205ENST00000397007 WWOXQ9NZC7 414 aa10.09□□□□□ -0.79
NUP98-205ENST00000397007 MID2Q9UJV3 735 aa10.09□□□□□ -0.79
NUP98-205ENST00000397007 GSAPA4D1B5 854 aa10.09□□□□□ -0.79
NUP98-205ENST00000397007 HSD3B1P14060 373 aa10.09□□□□□ -0.79
NUP98-205ENST00000397007 EPB42P16452 691 aa10.09□□□□□ -0.79
NUP98-205ENST00000397007 ITIH1P19827 911 aa10.09□□□□□ -0.79
NUP98-205ENST00000397007 HSD3B2P26439 372 aa10.09□□□□□ -0.79
NUP98-205ENST00000397007 PRKAA1Q13131 559 aa10.09□□□□□ -0.79
NUP98-205ENST00000397007 TLDC1Q6P9B6 456 aa10.09□□□□□ -0.79
NUP98-205ENST00000397007 TAX1BP1Q86VP1 789 aa10.09□□□□□ -0.79
NUP98-205ENST00000397007 TEX9Q8N6V9 391 aa10.09□□□□□ -0.79
NUP98-205ENST00000397007 OR2T11Q8NH01 316 aa10.09□□□□□ -0.79
NUP98-205ENST00000397007 PROKR1Q8TCW9 393 aa10.09□□□□□ -0.79
NUP98-205ENST00000397007 ZNF764Q96H86 408 aaPredicted RBP10.09□□□□□ -0.79
NUP98-205ENST00000397007 TSNARE1Q96NA8 513 aa10.09□□□□□ -0.79
NUP98-205ENST00000397007 CLK4Q9HAZ1 481 aaKnown RBP10.09□□□□□ -0.79
NUP98-205ENST00000397007 ABCF3Q9NUQ8 709 aa10.09□□□□□ -0.79
NUP98-205ENST00000397007 B3GALT1Q9Y5Z6 326 aa10.09□□□□□ -0.79
NUP98-205ENST00000397007 SPTBN4Q9H254 2564 aa10.09□□□□□ -0.79
NUP98-205ENST00000397007 RIF1Q5UIP0 2472 aaKnown RBP10.09□□□□□ -0.79
NUP98-205ENST00000397007 DSCR3O14972 297 aa10.09□□□□□ -0.79
NUP98-205ENST00000397007 ZNF749O43361 778 aa10.09□□□□□ -0.79
NUP98-205ENST00000397007 TLX3O43711 291 aaPredicted RBP10.09□□□□□ -0.79
NUP98-205ENST00000397007 BRINP1O60477 761 aa10.09□□□□□ -0.79
NUP98-205ENST00000397007 KATNA1O75449 491 aa10.09□□□□□ -0.79
NUP98-205ENST00000397007 SEMA3DO95025 777 aa10.09□□□□□ -0.79
NUP98-205ENST00000397007 CHRNGP07510 517 aa10.09□□□□□ -0.79
NUP98-205ENST00000397007 CYC1P08574 325 aa10.09□□□□□ -0.79
NUP98-205ENST00000397007 RAB40ALP0C0E4 278 aa10.09□□□□□ -0.79
NUP98-205ENST00000397007 SF1Q15637 639 aaKnown RBP10.09□□□□□ -0.79
NUP98-205ENST00000397007 ZC3H12BQ5HYM0 836 aaKnown RBP10.09□□□□□ -0.79
NUP98-205ENST00000397007 ZNF793Q6ZN11 406 aa10.09□□□□□ -0.79
NUP98-205ENST00000397007 CHTF18Q8WVB6 975 aa10.09□□□□□ -0.79
NUP98-205ENST00000397007 PHF21BQ96EK2 531 aa10.09□□□□□ -0.79
NUP98-205ENST00000397007 C7orf26Q96N11 449 aa10.09□□□□□ -0.79
NUP98-205ENST00000397007 ZNF578Q96N58 590 aaPredicted RBP10.09□□□□□ -0.79
NUP98-205ENST00000397007 KLHL31Q9H511 634 aa10.09□□□□□ -0.79
NUP98-205ENST00000397007 FGF21Q9NSA1 209 aa10.09□□□□□ -0.79
NUP98-205ENST00000397007 DNAJC15Q9Y5T4 150 aa10.09□□□□□ -0.79
NUP98-205ENST00000397007 ATMQ13315 3056 aa10.08□□□□□ -0.8
NUP98-205ENST00000397007 FEZF1A0PJY2 475 aa10.08□□□□□ -0.8
NUP98-205ENST00000397007 EFCAB7A8K855 629 aa10.08□□□□□ -0.8
NUP98-205ENST00000397007 CLDN9O95484 217 aa10.08□□□□□ -0.8
NUP98-205ENST00000397007 SERPINE1P05121 402 aa10.08□□□□□ -0.8
NUP98-205ENST00000397007 TAC1P20366 129 aa10.08□□□□□ -0.8
NUP98-205ENST00000397007 IGLV3-21P80748 117 aaPredicted RBP10.08□□□□□ -0.8
NUP98-205ENST00000397007 GPS2Q13227 327 aa10.08□□□□□ -0.8
NUP98-205ENST00000397007 Q6ZSR9 355 aa10.08□□□□□ -0.8
NUP98-205ENST00000397007 DGLUCYQ7Z3D6 616 aa10.08□□□□□ -0.8
NUP98-205ENST00000397007 ZNF317Q96PQ6 595 aaPredicted RBP10.08□□□□□ -0.8
NUP98-205ENST00000397007 DPH2Q9BQC3 489 aaPredicted RBP10.08□□□□□ -0.8
NUP98-205ENST00000397007 DDX31Q9H8H2 851 aaKnown RBP10.08□□□□□ -0.8
NUP98-205ENST00000397007 FAM149AA5PLN7 773 aa10.08□□□□□ -0.8
NUP98-205ENST00000397007 KLF7O75840 302 aaPredicted RBP10.08□□□□□ -0.8
NUP98-205ENST00000397007 OTCP00480 354 aa10.08□□□□□ -0.8
NUP98-205ENST00000397007 CSTF3Q12996 717 aaKnown RBP10.08□□□□□ -0.8
NUP98-205ENST00000397007 CHIT1Q13231 466 aa10.08□□□□□ -0.8
NUP98-205ENST00000397007 TUBB3Q13509 450 aa10.08□□□□□ -0.8
NUP98-205ENST00000397007 SLBPQ14493 270 aaKnown RBP eCLIP10.08□□□□□ -0.8
NUP98-205ENST00000397007 ARL13AQ5H913 290 aaPredicted RBP10.08□□□□□ -0.8
NUP98-205ENST00000397007 TCTE1Q5JU00 501 aa10.08□□□□□ -0.8
NUP98-205ENST00000397007 TTLQ8NG68 377 aa10.08□□□□□ -0.8
NUP98-205ENST00000397007 MED8Q96G25 268 aa10.08□□□□□ -0.8
NUP98-205ENST00000397007 AHCYL2Q96HN2 611 aaKnown RBP10.08□□□□□ -0.8
NUP98-205ENST00000397007 OR6C1Q96RD1 312 aa10.08□□□□□ -0.8
NUP98-205ENST00000397007 CMKLR1Q99788 373 aa10.08□□□□□ -0.8
NUP98-205ENST00000397007 ZNF385DQ9H6B1 395 aa10.08□□□□□ -0.8
NUP98-205ENST00000397007 ZDHHC2Q9UIJ5 367 aa10.08□□□□□ -0.8
NUP98-205ENST00000397007 EXO1Q9UQ84 846 aaKnown RBP10.08□□□□□ -0.8
NUP98-205ENST00000397007 IGKV3D-11A0A0A0MRZ8 115 aa10.08□□□□□ -0.8
NUP98-205ENST00000397007 H0YIG0 161 aa10.08□□□□□ -0.8
NUP98-205ENST00000397007 CLGNO14967 610 aa10.08□□□□□ -0.8
NUP98-205ENST00000397007 EFSO43281 561 aa10.08□□□□□ -0.8
NUP98-205ENST00000397007 DNAJB6O75190 326 aa10.08□□□□□ -0.8
NUP98-205ENST00000397007 HGFP14210 728 aa10.08□□□□□ -0.8
NUP98-205ENST00000397007 ZFP36L2P47974 494 aaKnown RBP10.08□□□□□ -0.8
NUP98-205ENST00000397007 NAGLUP54802 743 aa10.08□□□□□ -0.8
NUP98-205ENST00000397007 ITGA1P56199 1179 aa10.08□□□□□ -0.8
NUP98-205ENST00000397007 SMU1Q2TAY7 513 aa10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms