RNA–Protein interactions for RNA: ENST00000396832.5

CSNK1E-203, Transcript of casein kinase 1 epsilon, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSNK1E, Length 2,791 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-203ENST00000396832 AZGP1P25311 298 aaKnown RBP23.18■■□□□ 1.3
CSNK1E-203ENST00000396832 CORO1AP31146 461 aaKnown RBP23.18■■□□□ 1.3
CSNK1E-203ENST00000396832 GGT2P36268 569 aa23.18■■□□□ 1.3
CSNK1E-203ENST00000396832 IDH2P48735 452 aaKnown RBP23.18■■□□□ 1.3
CSNK1E-203ENST00000396832 OLR1P78380 273 aa23.18■■□□□ 1.3
CSNK1E-203ENST00000396832 SMU1Q2TAY7 513 aa23.18■■□□□ 1.3
CSNK1E-203ENST00000396832 C10orf62Q5T681 223 aaPredicted RBP23.18■■□□□ 1.3
CSNK1E-203ENST00000396832 ZNF621Q6ZSS3 439 aa23.18■■□□□ 1.3
CSNK1E-203ENST00000396832 RIPOR3Q96MK2 946 aa23.18■■□□□ 1.3
CSNK1E-203ENST00000396832 TSEN34Q9BSV6 310 aaKnown RBP23.18■■□□□ 1.3
CSNK1E-203ENST00000396832 ROGDIQ9GZN7 287 aa23.18■■□□□ 1.3
CSNK1E-203ENST00000396832 VNN2O95498 520 aa23.17■■□□□ 1.3
CSNK1E-203ENST00000396832 CD160O95971 181 aa23.17■■□□□ 1.3
CSNK1E-203ENST00000396832 KDELR2P33947 212 aa23.17■■□□□ 1.3
CSNK1E-203ENST00000396832 RGS4P49798 205 aa23.17■■□□□ 1.3
CSNK1E-203ENST00000396832 RHOAP61586 193 aa23.17■■□□□ 1.3
CSNK1E-203ENST00000396832 DDX39BQ13838 428 aaKnown RBP23.17■■□□□ 1.3
CSNK1E-203ENST00000396832 TAB1Q15750 504 aa23.17■■□□□ 1.3
CSNK1E-203ENST00000396832 CARNMT1Q8N4J0 409 aa23.17■■□□□ 1.3
CSNK1E-203ENST00000396832 SMURF1Q9HCE7 757 aa23.17■■□□□ 1.3
CSNK1E-203ENST00000396832 A0A0X1KG70 313 aa23.17■■□□□ 1.3
CSNK1E-203ENST00000396832 CLDN7O95471 211 aa23.17■■□□□ 1.3
CSNK1E-203ENST00000396832 ASGR1P07306 291 aa23.17■■□□□ 1.3
CSNK1E-203ENST00000396832 NUDT7P0C024 238 aa23.17■■□□□ 1.3
CSNK1E-203ENST00000396832 CD83Q01151 205 aa23.17■■□□□ 1.3
CSNK1E-203ENST00000396832 TAF1CQ15572 869 aaPredicted RBP23.17■■□□□ 1.3
CSNK1E-203ENST00000396832 TRIM60Q495X7 471 aa23.17■■□□□ 1.3
CSNK1E-203ENST00000396832 PRSS55Q6UWB4 352 aaPredicted RBP23.17■■□□□ 1.3
CSNK1E-203ENST00000396832 CLECL1Q8IZS7 167 aa23.17■■□□□ 1.3
CSNK1E-203ENST00000396832 DEPDC4Q8N2C3 294 aa23.17■■□□□ 1.3
CSNK1E-203ENST00000396832 MAL2Q969L2 176 aa23.17■■□□□ 1.3
CSNK1E-203ENST00000396832 SATB2Q9UPW6 733 aa23.17■■□□□ 1.3
CSNK1E-203ENST00000396832 OARD1Q9Y530 152 aa23.17■■□□□ 1.3
CSNK1E-203ENST00000396832 A0A075B6Q4 140 aa23.16■■□□□ 1.3
CSNK1E-203ENST00000396832 CPNE3O75131 537 aaKnown RBP23.16■■□□□ 1.3
CSNK1E-203ENST00000396832 ZNF7P17097 686 aaPredicted RBP23.16■■□□□ 1.3
CSNK1E-203ENST00000396832 HOXB9P17482 250 aaPredicted RBP23.16■■□□□ 1.3
CSNK1E-203ENST00000396832 SDC1P18827 310 aa23.16■■□□□ 1.3
CSNK1E-203ENST00000396832 RPS5P46782 204 aaKnown RBP23.16■■□□□ 1.3
CSNK1E-203ENST00000396832 DGKEP52429 567 aa23.16■■□□□ 1.3
CSNK1E-203ENST00000396832 CDH4P55283 916 aa23.16■■□□□ 1.3
CSNK1E-203ENST00000396832 ITGA1P56199 1179 aa23.16■■□□□ 1.3
CSNK1E-203ENST00000396832 ZNF605Q86T29 641 aa23.16■■□□□ 1.3
CSNK1E-203ENST00000396832 TP53I13Q8NBR0 393 aaPredicted RBP23.16■■□□□ 1.3
CSNK1E-203ENST00000396832 OR52J3Q8NH60 311 aa23.16■■□□□ 1.3
CSNK1E-203ENST00000396832 GPR151Q8TDV0 419 aa23.16■■□□□ 1.3
CSNK1E-203ENST00000396832 PANX1Q96RD7 426 aa23.16■■□□□ 1.3
CSNK1E-203ENST00000396832 RRAGCQ9HB90 399 aa23.16■■□□□ 1.3
CSNK1E-203ENST00000396832 ARL15Q9NXU5 204 aa23.16■■□□□ 1.3
CSNK1E-203ENST00000396832 STMN3Q9NZ72 180 aa23.16■■□□□ 1.3
CSNK1E-203ENST00000396832 PRELID1Q9Y255 219 aa23.16■■□□□ 1.3
CSNK1E-203ENST00000396832 PLK4O00444 970 aa23.16■■□□□ 1.3
CSNK1E-203ENST00000396832 ATF6P18850 670 aa23.16■■□□□ 1.3
CSNK1E-203ENST00000396832 CD72P21854 359 aa23.16■■□□□ 1.3
CSNK1E-203ENST00000396832 SLC11A2P49281 568 aa23.16■■□□□ 1.3
CSNK1E-203ENST00000396832 DAB2P98082 770 aa23.16■■□□□ 1.3
CSNK1E-203ENST00000396832 TSTQ16762 297 aaKnown RBP23.16■■□□□ 1.3
CSNK1E-203ENST00000396832 TTLL9Q3SXZ7 439 aa23.16■■□□□ 1.3
CSNK1E-203ENST00000396832 CYP27C1Q4G0S4 372 aa23.16■■□□□ 1.3
CSNK1E-203ENST00000396832 TRIM46Q7Z4K8 759 aa23.16■■□□□ 1.3
CSNK1E-203ENST00000396832 SPERTQ8NA61 448 aa23.16■■□□□ 1.3
CSNK1E-203ENST00000396832 OR5M11Q96RB7 305 aa23.16■■□□□ 1.3
CSNK1E-203ENST00000396832 BBS2Q9BXC9 721 aa23.16■■□□□ 1.3
CSNK1E-203ENST00000396832 ELOVL6Q9H5J4 265 aa23.16■■□□□ 1.3
CSNK1E-203ENST00000396832 CRLS1Q9UJA2 301 aa23.16■■□□□ 1.3
CSNK1E-203ENST00000396832 CA12O43570 354 aa23.15■■□□□ 1.3
CSNK1E-203ENST00000396832 ENGP17813 658 aa23.15■■□□□ 1.3
CSNK1E-203ENST00000396832 ITPKAP23677 461 aa23.15■■□□□ 1.3
CSNK1E-203ENST00000396832 ATP5C1P36542 298 aaKnown RBP23.15■■□□□ 1.3
CSNK1E-203ENST00000396832 MED22Q15528 200 aa23.15■■□□□ 1.3
CSNK1E-203ENST00000396832 ZBTB2Q8N680 514 aa23.15■■□□□ 1.3
CSNK1E-203ENST00000396832 RUBCNLQ9H714 662 aa23.15■■□□□ 1.3
CSNK1E-203ENST00000396832 C3orf14Q9HBI5 128 aa23.15■■□□□ 1.3
CSNK1E-203ENST00000396832 TIGARQ9NQ88 270 aa23.15■■□□□ 1.3
CSNK1E-203ENST00000396832 EFCAB10A6NFE3 127 aa23.15■■□□□ 1.3
CSNK1E-203ENST00000396832 STK16O75716 305 aa23.15■■□□□ 1.3
CSNK1E-203ENST00000396832 VMACQ2NL98 169 aa23.15■■□□□ 1.3
CSNK1E-203ENST00000396832 RGMBQ6NW40 437 aa23.15■■□□□ 1.3
CSNK1E-203ENST00000396832 SERPINA11Q86U17 422 aa23.15■■□□□ 1.3
CSNK1E-203ENST00000396832 CRELD1Q96HD1 420 aa23.15■■□□□ 1.3
CSNK1E-203ENST00000396832 PRRG3Q9BZD7 231 aa23.15■■□□□ 1.3
CSNK1E-203ENST00000396832 ASAH2Q9NR71 780 aa23.15■■□□□ 1.3
CSNK1E-203ENST00000396832 MOSPD1Q9UJG1 213 aa23.15■■□□□ 1.3
CSNK1E-203ENST00000396832 V9GYH0 126 aa23.15■■□□□ 1.3
CSNK1E-203ENST00000396832 USP34Q70CQ2 3546 aa23.15■■□□□ 1.3
CSNK1E-203ENST00000396832 GAPDHSO14556 408 aaPredicted RBP23.14■■□□□ 1.3
CSNK1E-203ENST00000396832 CELF2O95319 508 aaKnown RBP23.14■■□□□ 1.3
CSNK1E-203ENST00000396832 OPN1SWP03999 348 aa23.14■■□□□ 1.3
CSNK1E-203ENST00000396832 OR3A3P47888 321 aa23.14■■□□□ 1.3
CSNK1E-203ENST00000396832 LRRC73Q5JTD7 316 aa23.14■■□□□ 1.3
CSNK1E-203ENST00000396832 STK40Q8N2I9 435 aa23.14■■□□□ 1.3
CSNK1E-203ENST00000396832 OR5H6Q8NGV6 325 aa23.14■■□□□ 1.3
CSNK1E-203ENST00000396832 ASB15Q8WXK1 588 aa23.14■■□□□ 1.3
CSNK1E-203ENST00000396832 GON7Q9BXV9 100 aa23.14■■□□□ 1.3
CSNK1E-203ENST00000396832 ASIC5Q9NY37 505 aa23.14■■□□□ 1.3
CSNK1E-203ENST00000396832 GABRQQ9UN88 632 aa23.14■■□□□ 1.3
CSNK1E-203ENST00000396832 A0A1W2PQ09 198 aa23.14■■□□□ 1.29
CSNK1E-203ENST00000396832 DUSP11O75319 330 aaKnown RBP23.14■■□□□ 1.29
CSNK1E-203ENST00000396832 EPORP19235 508 aa23.14■■□□□ 1.29
CSNK1E-203ENST00000396832 RING1Q06587 406 aa23.14■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms