RNA–Protein interactions for RNA: ENST00000396629.6

SCFD1-202, Transcript of sec1 family domain containing 1, humanhuman

TSL 2 BASIC

Gene SCFD1, Length 2,021 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-202ENST00000396629 MYO1CO00159 1063 aa7.9□□□□□ -1.14
SCFD1-202ENST00000396629 HAT1O14929 419 aa7.9□□□□□ -1.14
SCFD1-202ENST00000396629 PEX1O43933 1283 aa7.9□□□□□ -1.14
SCFD1-202ENST00000396629 CDC40O60508 579 aaKnown RBP eCLIP7.9□□□□□ -1.14
SCFD1-202ENST00000396629 ITGA8P53708 1063 aa7.9□□□□□ -1.14
SCFD1-202ENST00000396629 ABATP80404 500 aa7.9□□□□□ -1.14
SCFD1-202ENST00000396629 MPP1Q00013 466 aa7.9□□□□□ -1.14
SCFD1-202ENST00000396629 ANKRD20A4Q4UJ75 823 aa7.9□□□□□ -1.14
SCFD1-202ENST00000396629 EEF1AKMT2Q5JPI9 291 aaKnown RBP7.9□□□□□ -1.14
SCFD1-202ENST00000396629 AARS2Q5JTZ9 985 aaKnown RBP7.9□□□□□ -1.14
SCFD1-202ENST00000396629 TMEM198Q66K66 360 aa7.9□□□□□ -1.14
SCFD1-202ENST00000396629 LDB1Q86U70 411 aaPredicted RBP7.9□□□□□ -1.14
SCFD1-202ENST00000396629 CDC20BQ86Y33 519 aa7.9□□□□□ -1.14
SCFD1-202ENST00000396629 ZZZ3Q8IYH5 903 aa7.9□□□□□ -1.14
SCFD1-202ENST00000396629 KIF2BQ8N4N8 673 aa7.9□□□□□ -1.14
SCFD1-202ENST00000396629 OR52N2Q8NGI0 321 aa7.9□□□□□ -1.14
SCFD1-202ENST00000396629 OR52K1Q8NGK4 314 aa7.9□□□□□ -1.14
SCFD1-202ENST00000396629 OR6P1Q8NGX9 317 aa7.9□□□□□ -1.14
SCFD1-202ENST00000396629 SPATA3Q8NHX4 192 aa7.9□□□□□ -1.14
SCFD1-202ENST00000396629 SKA2Q8WVK7 121 aaPredicted RBP7.9□□□□□ -1.14
SCFD1-202ENST00000396629 ZNF778Q96MU6 729 aa7.9□□□□□ -1.14
SCFD1-202ENST00000396629 OSBPL8Q9BZF1 889 aa7.9□□□□□ -1.14
SCFD1-202ENST00000396629 CLEC4MQ9H2X3 399 aaPredicted RBP7.9□□□□□ -1.14
SCFD1-202ENST00000396629 LANCL2Q9NS86 450 aa7.9□□□□□ -1.14
SCFD1-202ENST00000396629 TAC3Q9UHF0 121 aa7.9□□□□□ -1.14
SCFD1-202ENST00000396629 DNAJC13O75165 2243 aa7.9□□□□□ -1.14
SCFD1-202ENST00000396629 MACROD2A1Z1Q3 448 aa7.9□□□□□ -1.15
SCFD1-202ENST00000396629 KIAA1324LA8MWY0 1029 aaPredicted RBP7.9□□□□□ -1.15
SCFD1-202ENST00000396629 MAGEB17A8MXT2 336 aa7.9□□□□□ -1.15
SCFD1-202ENST00000396629 SGK494L7N484 410 aa7.9□□□□□ -1.15
SCFD1-202ENST00000396629 KIF5CO60282 957 aa7.9□□□□□ -1.15
SCFD1-202ENST00000396629 IL10P22301 178 aa7.9□□□□□ -1.15
SCFD1-202ENST00000396629 RPS3P23396 243 aaKnown RBP eCLIP7.9□□□□□ -1.15
SCFD1-202ENST00000396629 ADRA1DP25100 572 aa7.9□□□□□ -1.15
SCFD1-202ENST00000396629 ATP5DP30049 168 aa7.9□□□□□ -1.15
SCFD1-202ENST00000396629 HSD17B2P37059 387 aa7.9□□□□□ -1.15
SCFD1-202ENST00000396629 RFC3P40938 356 aa7.9□□□□□ -1.15
SCFD1-202ENST00000396629 ZFP36L2P47974 494 aaKnown RBP7.9□□□□□ -1.15
SCFD1-202ENST00000396629 TTPAP49638 278 aa7.9□□□□□ -1.15
SCFD1-202ENST00000396629 DGKQP52824 942 aa7.9□□□□□ -1.15
SCFD1-202ENST00000396629 OR4D2P58180 307 aa7.9□□□□□ -1.15
SCFD1-202ENST00000396629 CDH17Q12864 832 aa7.9□□□□□ -1.15
SCFD1-202ENST00000396629 ABRAXAS2Q15018 415 aa7.9□□□□□ -1.15
SCFD1-202ENST00000396629 NSDHLQ15738 373 aa7.9□□□□□ -1.15
SCFD1-202ENST00000396629 P3H1Q32P28 736 aa7.9□□□□□ -1.15
SCFD1-202ENST00000396629 GXYLT1Q4G148 440 aa7.9□□□□□ -1.15
SCFD1-202ENST00000396629 C11orf63Q6NUN7 778 aa7.9□□□□□ -1.15
SCFD1-202ENST00000396629 TMEM214Q6NUQ4 689 aaKnown RBP7.9□□□□□ -1.15
SCFD1-202ENST00000396629 PAMR1Q6UXH9 720 aa7.9□□□□□ -1.15
SCFD1-202ENST00000396629 CLEC9AQ6UXN8 241 aa7.9□□□□□ -1.15
SCFD1-202ENST00000396629 OTOAQ7RTW8 1153 aa7.9□□□□□ -1.15
SCFD1-202ENST00000396629 VN1R4Q7Z5H5 301 aa7.9□□□□□ -1.15
SCFD1-202ENST00000396629 LRRC6Q86X45 466 aa7.9□□□□□ -1.15
SCFD1-202ENST00000396629 PLD3Q8IV08 490 aa7.9□□□□□ -1.15
SCFD1-202ENST00000396629 WFDC11Q8NEX6 87 aa7.9□□□□□ -1.15
SCFD1-202ENST00000396629 GOT1L1Q8NHS2 421 aaPredicted RBP7.9□□□□□ -1.15
SCFD1-202ENST00000396629 PEX13Q92968 403 aa7.9□□□□□ -1.15
SCFD1-202ENST00000396629 CCDC42Q96M95 316 aa7.9□□□□□ -1.15
SCFD1-202ENST00000396629 EBNA1BP2Q99848 306 aaKnown RBP7.9□□□□□ -1.15
SCFD1-202ENST00000396629 ZNHIT6Q9NWK9 470 aaKnown RBP7.9□□□□□ -1.15
SCFD1-202ENST00000396629 IFNKQ9P0W0 207 aa7.9□□□□□ -1.15
SCFD1-202ENST00000396629 MARCH4Q9P2E8 410 aaPredicted RBP7.9□□□□□ -1.15
SCFD1-202ENST00000396629 RTTNQ86VV8 2226 aa7.89□□□□□ -1.15
SCFD1-202ENST00000396629 EML6Q6ZMW3 1958 aa7.89□□□□□ -1.15
SCFD1-202ENST00000396629 KCNE1BA0A087WTH5 132 aa7.89□□□□□ -1.15
SCFD1-202ENST00000396629 FEZF1A0PJY2 475 aa7.89□□□□□ -1.15
SCFD1-202ENST00000396629 ZNF839A8K0R7 811 aa7.89□□□□□ -1.15
SCFD1-202ENST00000396629 PSIP1O75475 530 aaKnown RBP7.89□□□□□ -1.15
SCFD1-202ENST00000396629 PDE9AO76083 593 aa7.89□□□□□ -1.15
SCFD1-202ENST00000396629 MBD3O95983 291 aa7.89□□□□□ -1.15
SCFD1-202ENST00000396629 STATHP02808 62 aa7.89□□□□□ -1.15
SCFD1-202ENST00000396629 HEXAP06865 529 aa7.89□□□□□ -1.15
SCFD1-202ENST00000396629 INHBBP09529 407 aa7.89□□□□□ -1.15
SCFD1-202ENST00000396629 IL1RNP18510 177 aa7.89□□□□□ -1.15
SCFD1-202ENST00000396629 HOXC12P31275 282 aa7.89□□□□□ -1.15
SCFD1-202ENST00000396629 NR0B1P51843 470 aaKnown RBP7.89□□□□□ -1.15
SCFD1-202ENST00000396629 PNLIPRP1P54315 467 aa7.89□□□□□ -1.15
SCFD1-202ENST00000396629 TPM4P67936 248 aa7.89□□□□□ -1.15
SCFD1-202ENST00000396629 PRAMEP78395 509 aa7.89□□□□□ -1.15
SCFD1-202ENST00000396629 PAOXQ6QHF9 649 aa7.89□□□□□ -1.15
SCFD1-202ENST00000396629 LIX1LQ8IVB5 337 aa7.89□□□□□ -1.15
SCFD1-202ENST00000396629 FAM71DQ8N9W8 422 aa7.89□□□□□ -1.15
SCFD1-202ENST00000396629 ACRBPQ8NEB7 543 aa7.89□□□□□ -1.15
SCFD1-202ENST00000396629 OR5M3Q8NGP4 307 aa7.89□□□□□ -1.15
SCFD1-202ENST00000396629 TSLPQ969D9 159 aa7.89□□□□□ -1.15
SCFD1-202ENST00000396629 TM4SF19Q96DZ7 209 aa7.89□□□□□ -1.15
SCFD1-202ENST00000396629 OR1F2PQ96R84 312 aa7.89□□□□□ -1.15
SCFD1-202ENST00000396629 PKP4Q99569 1192 aa7.89□□□□□ -1.15
SCFD1-202ENST00000396629 TTYH2Q9BSA4 534 aa7.89□□□□□ -1.15
SCFD1-202ENST00000396629 REPIN1Q9BWE0 567 aaKnown RBP7.89□□□□□ -1.15
SCFD1-202ENST00000396629 SLC6A16Q9GZN6 736 aa7.89□□□□□ -1.15
SCFD1-202ENST00000396629 CATSPERZQ9NTU4 200 aa7.89□□□□□ -1.15
SCFD1-202ENST00000396629 ANAPC5Q9UJX4 755 aa7.89□□□□□ -1.15
SCFD1-202ENST00000396629 PCDHA3Q9Y5H8 950 aa7.89□□□□□ -1.15
SCFD1-202ENST00000396629 FN1P02751 2386 aaKnown RBP7.89□□□□□ -1.15
SCFD1-202ENST00000396629 A0A0G2JNJ9 132 aa7.88□□□□□ -1.15
SCFD1-202ENST00000396629 A6NNC1 897 aa7.88□□□□□ -1.15
SCFD1-202ENST00000396629 E7ENX8 843 aa7.88□□□□□ -1.15
SCFD1-202ENST00000396629 FCHO1O14526 889 aa7.88□□□□□ -1.15
SCFD1-202ENST00000396629 CD3EAPO15446 510 aaKnown RBP7.88□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms