RNA–Protein interactions for RNA: ENST00000396308.3

VAMP1-202, Transcript of vesicle associated membrane protein 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene VAMP1, Length 1,113 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-202ENST00000396308 ZNF806P0C7X5 589 aa14.76□□□□□ -0.05
VAMP1-202ENST00000396308 BCL6P41182 706 aa14.76□□□□□ -0.05
VAMP1-202ENST00000396308 MLLT3P42568 568 aaPredicted RBP14.76□□□□□ -0.05
VAMP1-202ENST00000396308 MNAT1P51948 309 aa14.76□□□□□ -0.05
VAMP1-202ENST00000396308 OR1D5P58170 312 aa14.76□□□□□ -0.05
VAMP1-202ENST00000396308 YBX1P67809 324 aaKnown RBP14.76□□□□□ -0.05
VAMP1-202ENST00000396308 NHLH1Q02575 133 aa14.76□□□□□ -0.05
VAMP1-202ENST00000396308 CYP4F3Q08477 520 aa14.76□□□□□ -0.05
VAMP1-202ENST00000396308 CUL3Q13618 768 aa14.76□□□□□ -0.05
VAMP1-202ENST00000396308 KRT72Q14CN4 511 aa14.76□□□□□ -0.05
VAMP1-202ENST00000396308 AMZ1Q400G9 498 aa14.76□□□□□ -0.05
VAMP1-202ENST00000396308 TMEM35AQ53FP2 167 aa14.76□□□□□ -0.05
VAMP1-202ENST00000396308 ZC3H12BQ5HYM0 836 aaKnown RBP14.76□□□□□ -0.05
VAMP1-202ENST00000396308 TCEAL6Q6IPX3 200 aa14.76□□□□□ -0.05
VAMP1-202ENST00000396308 C6orf89Q6UWU4 347 aa14.76□□□□□ -0.05
VAMP1-202ENST00000396308 SPRED1Q7Z699 444 aa14.76□□□□□ -0.05
VAMP1-202ENST00000396308 Q8N9G6 341 aaPredicted RBP14.76□□□□□ -0.05
VAMP1-202ENST00000396308 C19orf47Q8N9M1 422 aaKnown RBP14.76□□□□□ -0.05
VAMP1-202ENST00000396308 SRFBP1Q8NEF9 429 aaKnown RBP14.76□□□□□ -0.05
VAMP1-202ENST00000396308 STARD8Q92502 1023 aa14.76□□□□□ -0.05
VAMP1-202ENST00000396308 N4BP2L2Q92802 583 aaPredicted RBP14.76□□□□□ -0.05
VAMP1-202ENST00000396308 TCEAL3Q969E4 200 aa14.76□□□□□ -0.05
VAMP1-202ENST00000396308 DPYSL5Q9BPU6 564 aa14.76□□□□□ -0.05
VAMP1-202ENST00000396308 ABCG4Q9H172 646 aa14.76□□□□□ -0.05
VAMP1-202ENST00000396308 KCNH6Q9H252 994 aa14.76□□□□□ -0.05
VAMP1-202ENST00000396308 SOHLH2Q9NX45 425 aa14.76□□□□□ -0.05
VAMP1-202ENST00000396308 GIMAP2Q9UG22 337 aa14.76□□□□□ -0.05
VAMP1-202ENST00000396308 CCL27Q9Y4X3 112 aa14.76□□□□□ -0.05
VAMP1-202ENST00000396308 PCDHGA4Q9Y5G9 962 aa14.76□□□□□ -0.05
VAMP1-202ENST00000396308 COPG1Q9Y678 874 aaKnown RBP14.76□□□□□ -0.05
VAMP1-202ENST00000396308 AP1M2Q9Y6Q5 423 aa14.76□□□□□ -0.05
VAMP1-202ENST00000396308 MDC1Q14676 2089 aaKnown RBP14.76□□□□□ -0.05
VAMP1-202ENST00000396308 FOXD2O60548 495 aaPredicted RBP14.75□□□□□ -0.05
VAMP1-202ENST00000396308 UBOX5O94941 541 aa14.75□□□□□ -0.05
VAMP1-202ENST00000396308 TGFB1P01137 390 aa14.75□□□□□ -0.05
VAMP1-202ENST00000396308 ESRRAP11474 423 aaPredicted RBP14.75□□□□□ -0.05
VAMP1-202ENST00000396308 PRDX6P30041 224 aa14.75□□□□□ -0.05
VAMP1-202ENST00000396308 RASSF2P50749 326 aa14.75□□□□□ -0.05
VAMP1-202ENST00000396308 KLF10Q13118 480 aa14.75□□□□□ -0.05
VAMP1-202ENST00000396308 SLC14A1Q13336 389 aa14.75□□□□□ -0.05
VAMP1-202ENST00000396308 PDCD4Q53EL6 469 aaKnown RBP14.75□□□□□ -0.05
VAMP1-202ENST00000396308 IL23RQ5VWK5 629 aa14.75□□□□□ -0.05
VAMP1-202ENST00000396308 KHDRBS2Q5VWX1 349 aaKnown RBP14.75□□□□□ -0.05
VAMP1-202ENST00000396308 FAM219BQ5XKK7 198 aa14.75□□□□□ -0.05
VAMP1-202ENST00000396308 FAM92BQ6ZTR7 304 aa14.75□□□□□ -0.05
VAMP1-202ENST00000396308 YTHDF3Q7Z739 585 aaKnown RBP14.75□□□□□ -0.05
VAMP1-202ENST00000396308 ASPGQ86U10 573 aa14.75□□□□□ -0.05
VAMP1-202ENST00000396308 PLD3Q8IV08 490 aa14.75□□□□□ -0.05
VAMP1-202ENST00000396308 ANKRD53Q8N9V6 530 aa14.75□□□□□ -0.05
VAMP1-202ENST00000396308 CAMKVQ8NCB2 501 aa14.75□□□□□ -0.05
VAMP1-202ENST00000396308 RGMAQ96B86 450 aa14.75□□□□□ -0.05
VAMP1-202ENST00000396308 TCTN2Q96GX1 697 aa14.75□□□□□ -0.05
VAMP1-202ENST00000396308 EDEM2Q9BV94 578 aa14.75□□□□□ -0.05
VAMP1-202ENST00000396308 CCDC106Q9BWC9 280 aa14.75□□□□□ -0.05
VAMP1-202ENST00000396308 MS4A8Q9BY19 250 aa14.75□□□□□ -0.05
VAMP1-202ENST00000396308 BRINP2Q9C0B6 783 aa14.75□□□□□ -0.05
VAMP1-202ENST00000396308 SYNDIG1Q9H7V2 258 aa14.75□□□□□ -0.05
VAMP1-202ENST00000396308 COPS7BQ9H9Q2 264 aaPredicted RBP14.75□□□□□ -0.05
VAMP1-202ENST00000396308 TMEM45AQ9NWC5 275 aa14.75□□□□□ -0.05
VAMP1-202ENST00000396308 FTSJ1Q9UET6 329 aa14.75□□□□□ -0.05
VAMP1-202ENST00000396308 KLHL20Q9Y2M5 609 aa14.75□□□□□ -0.05
VAMP1-202ENST00000396308 MN1Q10571 1320 aaPredicted RBP14.74□□□□□ -0.05
VAMP1-202ENST00000396308 A0A088AWK7 358 aa14.74□□□□□ -0.05
VAMP1-202ENST00000396308 GNG14A0A1W2PPG7 69 aa14.74□□□□□ -0.05
VAMP1-202ENST00000396308 EME2A4GXA9 379 aaPredicted RBP14.74□□□□□ -0.05
VAMP1-202ENST00000396308 TXNDC9O14530 226 aa14.74□□□□□ -0.05
VAMP1-202ENST00000396308 LDOC1O95751 146 aaPredicted RBP14.74□□□□□ -0.05
VAMP1-202ENST00000396308 ALDOCP09972 364 aaKnown RBP14.74□□□□□ -0.05
VAMP1-202ENST00000396308 THRAP10827 490 aa14.74□□□□□ -0.05
VAMP1-202ENST00000396308 CKMT1AP12532 417 aa14.74□□□□□ -0.05
VAMP1-202ENST00000396308 PVRP15151 417 aa14.74□□□□□ -0.05
VAMP1-202ENST00000396308 ZNF10P21506 573 aaPredicted RBP14.74□□□□□ -0.05
VAMP1-202ENST00000396308 CALB2P22676 271 aa14.74□□□□□ -0.05
VAMP1-202ENST00000396308 PIK3R1P27986 724 aa14.74□□□□□ -0.05
VAMP1-202ENST00000396308 TIA1P31483 386 aaKnown RBP eCLIP14.74□□□□□ -0.05
VAMP1-202ENST00000396308 ASMTP46597 345 aa14.74□□□□□ -0.05
VAMP1-202ENST00000396308 ACADVLP49748 655 aa14.74□□□□□ -0.05
VAMP1-202ENST00000396308 CLNS1AP54105 237 aaKnown RBP14.74□□□□□ -0.05
VAMP1-202ENST00000396308 PWP1Q13610 501 aa14.74□□□□□ -0.05
VAMP1-202ENST00000396308 HERC3Q15034 1050 aa14.74□□□□□ -0.05
VAMP1-202ENST00000396308 CLPPQ16740 277 aaPredicted RBP14.74□□□□□ -0.05
VAMP1-202ENST00000396308 RFTN2Q52LD8 501 aaPredicted RBP14.74□□□□□ -0.05
VAMP1-202ENST00000396308 AGKQ53H12 422 aa14.74□□□□□ -0.05
VAMP1-202ENST00000396308 TMTC4Q5T4D3 741 aa14.74□□□□□ -0.05
VAMP1-202ENST00000396308 NOXRED1Q6NXP6 359 aa14.74□□□□□ -0.05
VAMP1-202ENST00000396308 GUSBP11Q6P575 273 aa14.74□□□□□ -0.05
VAMP1-202ENST00000396308 TRIM40Q6P9F5 258 aa14.74□□□□□ -0.05
VAMP1-202ENST00000396308 FOXR1Q6PIV2 292 aa14.74□□□□□ -0.05
VAMP1-202ENST00000396308 WDR74Q6RFH5 385 aaPredicted RBP14.74□□□□□ -0.05
VAMP1-202ENST00000396308 CYP20A1Q6UW02 462 aa14.74□□□□□ -0.05
VAMP1-202ENST00000396308 RNF44Q7L0R7 432 aa14.74□□□□□ -0.05
VAMP1-202ENST00000396308 NUDT13Q86X67 352 aa14.74□□□□□ -0.05
VAMP1-202ENST00000396308 LIX1Q8N485 282 aa14.74□□□□□ -0.05
VAMP1-202ENST00000396308 RNF175Q8N4F7 328 aa14.74□□□□□ -0.05
VAMP1-202ENST00000396308 C1orf52Q8N6N3 182 aaKnown RBP14.74□□□□□ -0.05
VAMP1-202ENST00000396308 PRSS33Q8NF86 280 aa14.74□□□□□ -0.05
VAMP1-202ENST00000396308 TRAPPC9Q96Q05 1148 aa14.74□□□□□ -0.05
VAMP1-202ENST00000396308 MRPL1Q9BYD6 325 aaKnown RBP14.74□□□□□ -0.05
VAMP1-202ENST00000396308 DPY30Q9C005 99 aa14.74□□□□□ -0.05
VAMP1-202ENST00000396308 KLHL25Q9H0H3 589 aa14.74□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms