RNA–Protein interactions for RNA: ENST00000396268.7

CCHCR1-203, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCHCR1, Length 2,958 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-203ENST00000396268 TCF25Q9BQ70 676 aa13.57□□□□□ -0.24
CCHCR1-203ENST00000396268 H2AFJQ9BTM1 129 aa13.57□□□□□ -0.24
CCHCR1-203ENST00000396268 SLIRPQ9GZT3 109 aaKnown RBP13.57□□□□□ -0.24
CCHCR1-203ENST00000396268 ATG10Q9H0Y0 220 aa13.57□□□□□ -0.24
CCHCR1-203ENST00000396268 PRKAG2Q9UGJ0 569 aa13.57□□□□□ -0.24
CCHCR1-203ENST00000396268 SLC22A14Q9Y267 594 aa13.57□□□□□ -0.24
CCHCR1-203ENST00000396268 GPSM3Q9Y4H4 160 aa13.57□□□□□ -0.24
CCHCR1-203ENST00000396268 IDH3BO43837 385 aa13.57□□□□□ -0.24
CCHCR1-203ENST00000396268 CYP7B1O75881 506 aa13.57□□□□□ -0.24
CCHCR1-203ENST00000396268 SPAM1P38567 509 aa13.57□□□□□ -0.24
CCHCR1-203ENST00000396268 CXCR4P61073 352 aa13.57□□□□□ -0.24
CCHCR1-203ENST00000396268 AP1S1P61966 158 aa13.57□□□□□ -0.24
CCHCR1-203ENST00000396268 SMAD3P84022 425 aaKnown RBP13.57□□□□□ -0.24
CCHCR1-203ENST00000396268 CCBE1Q6UXH8 406 aaPredicted RBP13.57□□□□□ -0.24
CCHCR1-203ENST00000396268 MACC1Q6ZN28 852 aa13.57□□□□□ -0.24
CCHCR1-203ENST00000396268 Q6ZPB1 254 aaPredicted RBP13.57□□□□□ -0.24
CCHCR1-203ENST00000396268 TSPYL5Q86VY4 417 aaPredicted RBP13.57□□□□□ -0.24
CCHCR1-203ENST00000396268 EFHD2Q96C19 240 aaPredicted RBP13.57□□□□□ -0.24
CCHCR1-203ENST00000396268 BTBD2Q9BX70 525 aa13.57□□□□□ -0.24
CCHCR1-203ENST00000396268 IL21Q9HBE4 155 aa13.57□□□□□ -0.24
CCHCR1-203ENST00000396268 RDH14Q9HBH5 336 aa13.57□□□□□ -0.24
CCHCR1-203ENST00000396268 CCNB1IP1Q9NPC3 277 aa13.57□□□□□ -0.24
CCHCR1-203ENST00000396268 KCTD5Q9NXV2 234 aa13.57□□□□□ -0.24
CCHCR1-203ENST00000396268 NDRG4Q9ULP0 352 aaKnown RBP13.57□□□□□ -0.24
CCHCR1-203ENST00000396268 ZNF451Q9Y4E5 1061 aa13.57□□□□□ -0.24
CCHCR1-203ENST00000396268 TLL1O43897 1013 aa13.56□□□□□ -0.24
CCHCR1-203ENST00000396268 PCDHGA12O60330 932 aa13.56□□□□□ -0.24
CCHCR1-203ENST00000396268 KRT8P05787 483 aa13.56□□□□□ -0.24
CCHCR1-203ENST00000396268 CTSAP10619 480 aa13.56□□□□□ -0.24
CCHCR1-203ENST00000396268 COX7A2P14406 83 aa13.56□□□□□ -0.24
CCHCR1-203ENST00000396268 HOXB6P17509 224 aaKnown RBP13.56□□□□□ -0.24
CCHCR1-203ENST00000396268 IRS1P35568 1242 aa13.56□□□□□ -0.24
CCHCR1-203ENST00000396268 EIF2DP41214 584 aaKnown RBP13.56□□□□□ -0.24
CCHCR1-203ENST00000396268 CASP3P42574 277 aa13.56□□□□□ -0.24
CCHCR1-203ENST00000396268 HNRNPFP52597 415 aaKnown RBP13.56□□□□□ -0.24
CCHCR1-203ENST00000396268 PPP5CP53041 499 aa13.56□□□□□ -0.24
CCHCR1-203ENST00000396268 NPRL3Q12980 569 aa13.56□□□□□ -0.24
CCHCR1-203ENST00000396268 BOP1Q14137 746 aaKnown RBP13.56□□□□□ -0.24
CCHCR1-203ENST00000396268 SF1Q15637 639 aaKnown RBP13.56□□□□□ -0.24
CCHCR1-203ENST00000396268 NOXRED1Q6NXP6 359 aa13.56□□□□□ -0.24
CCHCR1-203ENST00000396268 CCDC71Q8IV32 467 aaPredicted RBP13.56□□□□□ -0.24
CCHCR1-203ENST00000396268 TCEAL8Q8IYN2 117 aa13.56□□□□□ -0.24
CCHCR1-203ENST00000396268 CLECL1Q8IZS7 167 aa13.56□□□□□ -0.24
CCHCR1-203ENST00000396268 FAM9CQ8IZT9 166 aa13.56□□□□□ -0.24
CCHCR1-203ENST00000396268 APCDD1Q8J025 514 aa13.56□□□□□ -0.24
CCHCR1-203ENST00000396268 PHF10Q8WUB8 498 aaKnown RBP13.56□□□□□ -0.24
CCHCR1-203ENST00000396268 TESCQ96BS2 214 aa13.56□□□□□ -0.24
CCHCR1-203ENST00000396268 GABARAPL1Q9H0R8 117 aa13.56□□□□□ -0.24
CCHCR1-203ENST00000396268 SIRT5Q9NXA8 310 aa13.56□□□□□ -0.24
CCHCR1-203ENST00000396268 HSPE1-MOB4S4R3N1 261 aa13.56□□□□□ -0.24
CCHCR1-203ENST00000396268 MAGEB17A8MXT2 336 aa13.56□□□□□ -0.24
CCHCR1-203ENST00000396268 UPK1BO75841 260 aa13.56□□□□□ -0.24
CCHCR1-203ENST00000396268 KCNK5O95279 499 aa13.56□□□□□ -0.24
CCHCR1-203ENST00000396268 VIPP01282 170 aa13.56□□□□□ -0.24
CCHCR1-203ENST00000396268 ACVR2AP27037 513 aa13.56□□□□□ -0.24
CCHCR1-203ENST00000396268 CCR7P32248 378 aa13.56□□□□□ -0.24
CCHCR1-203ENST00000396268 GRK3P35626 688 aa13.56□□□□□ -0.24
CCHCR1-203ENST00000396268 NSG1P42857 185 aa13.56□□□□□ -0.24
CCHCR1-203ENST00000396268 DUOXA1Q1HG43 343 aa13.56□□□□□ -0.24
CCHCR1-203ENST00000396268 ZXDCQ2QGD7 858 aaPredicted RBP13.56□□□□□ -0.24
CCHCR1-203ENST00000396268 PRSS48Q7RTY5 328 aa13.56□□□□□ -0.24
CCHCR1-203ENST00000396268 CYP2U1Q7Z449 544 aa13.56□□□□□ -0.24
CCHCR1-203ENST00000396268 SERPINA11Q86U17 422 aa13.56□□□□□ -0.24
CCHCR1-203ENST00000396268 NLGN4XQ8N0W4 816 aa13.56□□□□□ -0.24
CCHCR1-203ENST00000396268 MINDY2Q8NBR6 621 aa13.56□□□□□ -0.24
CCHCR1-203ENST00000396268 GPR26Q8NDV2 337 aa13.56□□□□□ -0.24
CCHCR1-203ENST00000396268 ADAMTS19Q8TE59 1207 aa13.56□□□□□ -0.24
CCHCR1-203ENST00000396268 POP5Q969H6 163 aaKnown RBP13.56□□□□□ -0.24
CCHCR1-203ENST00000396268 CMTM7Q96FZ5 175 aa13.56□□□□□ -0.24
CCHCR1-203ENST00000396268 BBS2Q9BXC9 721 aa13.56□□□□□ -0.24
CCHCR1-203ENST00000396268 EMILIN2Q9BXX0 1053 aa13.56□□□□□ -0.24
CCHCR1-203ENST00000396268 TRIM39Q9HCM9 518 aa13.56□□□□□ -0.24
CCHCR1-203ENST00000396268 ADPRHL2Q9NX46 363 aa13.56□□□□□ -0.24
CCHCR1-203ENST00000396268 QPCTLQ9NXS2 382 aa13.56□□□□□ -0.24
CCHCR1-203ENST00000396268 SNX8Q9Y5X2 465 aa13.56□□□□□ -0.24
CCHCR1-203ENST00000396268 NTRK1P04629 796 aa13.56□□□□□ -0.24
CCHCR1-203ENST00000396268 C21orf33P30042 268 aaPredicted RBP13.56□□□□□ -0.24
CCHCR1-203ENST00000396268 CTNNB1P35222 781 aa13.56□□□□□ -0.24
CCHCR1-203ENST00000396268 MVKQ03426 396 aa13.56□□□□□ -0.24
CCHCR1-203ENST00000396268 CAMK2GQ13555 558 aaPredicted RBP13.56□□□□□ -0.24
CCHCR1-203ENST00000396268 PLEKHG6Q3KR16 790 aa13.56□□□□□ -0.24
CCHCR1-203ENST00000396268 PRSS36Q5K4E3 855 aa13.56□□□□□ -0.24
CCHCR1-203ENST00000396268 NEK5Q6P3R8 708 aa13.56□□□□□ -0.24
CCHCR1-203ENST00000396268 ZZZ3Q8IYH5 903 aa13.56□□□□□ -0.24
CCHCR1-203ENST00000396268 PROX1Q92786 737 aa13.56□□□□□ -0.24
CCHCR1-203ENST00000396268 ZFYVE19Q96K21 471 aa13.56□□□□□ -0.24
CCHCR1-203ENST00000396268 KCNC2Q96PR1 638 aa13.56□□□□□ -0.24
CCHCR1-203ENST00000396268 COPS8Q99627 209 aa13.56□□□□□ -0.24
CCHCR1-203ENST00000396268 COPS4Q9BT78 406 aa13.56□□□□□ -0.24
CCHCR1-203ENST00000396268 ERVW-1Q9UQF0 538 aa13.56□□□□□ -0.24
CCHCR1-203ENST00000396268 INSL6Q9Y581 213 aa13.56□□□□□ -0.24
CCHCR1-203ENST00000396268 CCL16O15467 120 aa13.55□□□□□ -0.24
CCHCR1-203ENST00000396268 EFCAB14O75071 495 aa13.55□□□□□ -0.24
CCHCR1-203ENST00000396268 HSMCR30P0CW71 290 aa13.55□□□□□ -0.24
CCHCR1-203ENST00000396268 GABRR2P28476 465 aa13.55□□□□□ -0.24
CCHCR1-203ENST00000396268 EPHB3P54753 998 aa13.55□□□□□ -0.24
CCHCR1-203ENST00000396268 PPIGQ13427 754 aaKnown RBP eCLIP13.55□□□□□ -0.246e-7■■■□□ 18.5
CCHCR1-203ENST00000396268 CAMK2BQ13554 666 aa13.55□□□□□ -0.24
CCHCR1-203ENST00000396268 VEPH1Q14D04 833 aa13.55□□□□□ -0.24
CCHCR1-203ENST00000396268 PROX2Q3B8N5 592 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms