RNA–Protein interactions for RNA: ENST00000395761.3

CXCL1-201, Transcript of C-X-C motif chemokine ligand 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CXCL1, Length 1,097 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1-201ENST00000395761 FARSAQ9Y285 508 aaKnown RBP15.77■□□□□ 0.12
CXCL1-201ENST00000395761 PCDHGA6Q9Y5G7 932 aa15.77■□□□□ 0.12
CXCL1-201ENST00000395761 MAU2Q9Y6X3 613 aa15.77■□□□□ 0.12
CXCL1-201ENST00000395761 CFAP47Q6ZTR5 3102 aa15.77■□□□□ 0.11
CXCL1-201ENST00000395761 MDC1Q14676 2089 aaKnown RBP15.76■□□□□ 0.11
CXCL1-201ENST00000395761 CACNA1BQ00975 2339 aa15.76■□□□□ 0.11
CXCL1-201ENST00000395761 HMGB1P1B2RPK0 211 aaPredicted RBP15.76■□□□□ 0.11
CXCL1-201ENST00000395761 C21orf140B9A014 251 aa15.76■□□□□ 0.11
CXCL1-201ENST00000395761 K7EPI3 171 aa15.76■□□□□ 0.11
CXCL1-201ENST00000395761 CLGNO14967 610 aa15.76■□□□□ 0.11
CXCL1-201ENST00000395761 CNOT3O75175 753 aaKnown RBP15.76■□□□□ 0.11
CXCL1-201ENST00000395761 H2AFYO75367 372 aaKnown RBP15.76■□□□□ 0.11
CXCL1-201ENST00000395761 SIX3O95343 332 aaPredicted RBP15.76■□□□□ 0.11
CXCL1-201ENST00000395761 CRHR1P34998 444 aa15.76■□□□□ 0.11
CXCL1-201ENST00000395761 CCT5P48643 541 aa15.76■□□□□ 0.11
CXCL1-201ENST00000395761 EMP3P54852 163 aa15.76■□□□□ 0.11
CXCL1-201ENST00000395761 FOXL2P58012 376 aa15.76■□□□□ 0.11
CXCL1-201ENST00000395761 DOC2AQ14183 400 aa15.76■□□□□ 0.11
CXCL1-201ENST00000395761 SLBPQ14493 270 aaKnown RBP eCLIP15.76■□□□□ 0.11
CXCL1-201ENST00000395761 RBBP5Q15291 538 aaKnown RBP15.76■□□□□ 0.11
CXCL1-201ENST00000395761 MUM1Q2TAK8 710 aa15.76■□□□□ 0.11
CXCL1-201ENST00000395761 NKAIN1Q4KMZ8 207 aa15.76■□□□□ 0.11
CXCL1-201ENST00000395761 XKR6Q5GH73 641 aa15.76■□□□□ 0.11
CXCL1-201ENST00000395761 ATP1A1-AS1Q5TC04 95 aa15.76■□□□□ 0.11
CXCL1-201ENST00000395761 MLIPQ5VWP3 458 aa15.76■□□□□ 0.11
CXCL1-201ENST00000395761 LRRC70Q7Z2Q7 622 aa15.76■□□□□ 0.11
CXCL1-201ENST00000395761 TMEM151BQ8IW70 566 aa15.76■□□□□ 0.11
CXCL1-201ENST00000395761 TEX9Q8N6V9 391 aa15.76■□□□□ 0.11
CXCL1-201ENST00000395761 PTGR2Q8N8N7 351 aaPredicted RBP15.76■□□□□ 0.11
CXCL1-201ENST00000395761 BANPQ8N9N5 519 aa15.76■□□□□ 0.11
CXCL1-201ENST00000395761 ANKRD53Q8N9V6 530 aa15.76■□□□□ 0.11
CXCL1-201ENST00000395761 ZSCAN1Q8NBB4 408 aa15.76■□□□□ 0.11
CXCL1-201ENST00000395761 KCT2Q8NC54 265 aa15.76■□□□□ 0.11
CXCL1-201ENST00000395761 STARD8Q92502 1023 aa15.76■□□□□ 0.11
CXCL1-201ENST00000395761 ZBTB9Q96C00 473 aa15.76■□□□□ 0.11
CXCL1-201ENST00000395761 PHF21BQ96EK2 531 aa15.76■□□□□ 0.11
CXCL1-201ENST00000395761 SMC6Q96SB8 1091 aa15.76■□□□□ 0.11
CXCL1-201ENST00000395761 GPR87Q9BY21 358 aa15.76■□□□□ 0.11
CXCL1-201ENST00000395761 NLNQ9BYT8 704 aa15.76■□□□□ 0.11
CXCL1-201ENST00000395761 ACTL8Q9H568 366 aa15.76■□□□□ 0.11
CXCL1-201ENST00000395761 OPTCQ9UBM4 332 aa15.76■□□□□ 0.11
CXCL1-201ENST00000395761 KCND3Q9UK17 655 aa15.76■□□□□ 0.11
CXCL1-201ENST00000395761 SEC16AO15027 2179 aa15.75■□□□□ 0.11
CXCL1-201ENST00000395761 TXNDC9O14530 226 aa15.75■□□□□ 0.11
CXCL1-201ENST00000395761 FOXS1O43638 330 aa15.75■□□□□ 0.11
CXCL1-201ENST00000395761 ONECUT2O95948 504 aa15.75■□□□□ 0.11
CXCL1-201ENST00000395761 SERPIND1P05546 499 aa15.75■□□□□ 0.11
CXCL1-201ENST00000395761 RAB40ALP0C0E4 278 aa15.75■□□□□ 0.11
CXCL1-201ENST00000395761 CD22P20273 847 aa15.75■□□□□ 0.11
CXCL1-201ENST00000395761 PTPN4P29074 926 aa15.75■□□□□ 0.11
CXCL1-201ENST00000395761 RPS15P62841 145 aaKnown RBP15.75■□□□□ 0.11
CXCL1-201ENST00000395761 CHIT1Q13231 466 aa15.75■□□□□ 0.11
CXCL1-201ENST00000395761 NCF4Q15080 339 aa15.75■□□□□ 0.11
CXCL1-201ENST00000395761 PCBP2Q15366 365 aaKnown RBP eCLIP15.75■□□□□ 0.11
CXCL1-201ENST00000395761 TTMPQ5BVD1 217 aa15.75■□□□□ 0.11
CXCL1-201ENST00000395761 COX15Q7KZN9 410 aa15.75■□□□□ 0.11
CXCL1-201ENST00000395761 CAMKVQ8NCB2 501 aa15.75■□□□□ 0.11
CXCL1-201ENST00000395761 MED4Q9NPJ6 270 aa15.75■□□□□ 0.11
CXCL1-201ENST00000395761 IFT80Q9P2H3 777 aaPredicted RBP15.75■□□□□ 0.11
CXCL1-201ENST00000395761 ZFP69BQ9UJL9 534 aa15.75■□□□□ 0.11
CXCL1-201ENST00000395761 GRID1Q9ULK0 1009 aa15.75■□□□□ 0.11
CXCL1-201ENST00000395761 FER1L5A0AVI2 2057 aa15.74■□□□□ 0.11
CXCL1-201ENST00000395761 ZNF891A8MT65 544 aaPredicted RBP15.74■□□□□ 0.11
CXCL1-201ENST00000395761 C9J4A7 227 aa15.74■□□□□ 0.11
CXCL1-201ENST00000395761 NDUFS4O43181 175 aa15.74■□□□□ 0.11
CXCL1-201ENST00000395761 TYROBPO43914 113 aa15.74■□□□□ 0.11
CXCL1-201ENST00000395761 SMIM24O75264 130 aa15.74■□□□□ 0.11
CXCL1-201ENST00000395761 GLRA3O75311 464 aa15.74■□□□□ 0.11
CXCL1-201ENST00000395761 CREG1O75629 220 aa15.74■□□□□ 0.11
CXCL1-201ENST00000395761 FURINP09958 794 aa15.74■□□□□ 0.11
CXCL1-201ENST00000395761 PRKAR1AP10644 381 aa15.74■□□□□ 0.11
CXCL1-201ENST00000395761 CREB1P16220 341 aa15.74■□□□□ 0.11
CXCL1-201ENST00000395761 EPB42P16452 691 aa15.74■□□□□ 0.11
CXCL1-201ENST00000395761 CXCR2P25025 360 aa15.74■□□□□ 0.11
CXCL1-201ENST00000395761 EEF1DP29692 281 aaKnown RBP15.74■□□□□ 0.11
CXCL1-201ENST00000395761 SLC18A1P54219 525 aa15.74■□□□□ 0.11
CXCL1-201ENST00000395761 MAGOHP61326 146 aaKnown RBP15.74■□□□□ 0.11
CXCL1-201ENST00000395761 ERV3-1Q14264 604 aa15.74■□□□□ 0.11
CXCL1-201ENST00000395761 GARNL3Q5VVW2 1013 aa15.74■□□□□ 0.11
CXCL1-201ENST00000395761 TMEM214Q6NUQ4 689 aaKnown RBP15.74■□□□□ 0.11
CXCL1-201ENST00000395761 MRPL14Q6P1L8 145 aaKnown RBP15.74■□□□□ 0.11
CXCL1-201ENST00000395761 PRSS41Q7RTY9 318 aa15.74■□□□□ 0.11
CXCL1-201ENST00000395761 GPR155Q7Z3F1 870 aa15.74■□□□□ 0.11
CXCL1-201ENST00000395761 C4orf33Q8N1A6 199 aa15.74■□□□□ 0.11
CXCL1-201ENST00000395761 TBC1D19Q8N5T2 526 aa15.74■□□□□ 0.11
CXCL1-201ENST00000395761 COL26A1Q96A83 441 aa15.74■□□□□ 0.11
CXCL1-201ENST00000395761 WDR34Q96EX3 536 aa15.74■□□□□ 0.11
CXCL1-201ENST00000395761 PTCD3Q96EY7 689 aaKnown RBP15.74■□□□□ 0.11
CXCL1-201ENST00000395761 C12orf65Q9H3J6 166 aaKnown RBP15.74■□□□□ 0.11
CXCL1-201ENST00000395761 EHD1Q9H4M9 534 aa15.74■□□□□ 0.11
CXCL1-201ENST00000395761 GPN3Q9UHW5 284 aaPredicted RBP15.74■□□□□ 0.11
CXCL1-201ENST00000395761 TCFL5Q9UL49 500 aa15.74■□□□□ 0.11
CXCL1-201ENST00000395761 EMCNQ9ULC0 261 aa15.74■□□□□ 0.11
CXCL1-201ENST00000395761 ZNF490Q9ULM2 529 aaPredicted RBP15.74■□□□□ 0.11
CXCL1-201ENST00000395761 LHX6Q9UPM6 363 aa15.74■□□□□ 0.11
CXCL1-201ENST00000395761 A0A0A6YYC8 382 aaPredicted RBP15.73■□□□□ 0.11
CXCL1-201ENST00000395761 STX16-NPEPL1H3BU86 382 aa15.73■□□□□ 0.11
CXCL1-201ENST00000395761 I3L1I5 382 aaPredicted RBP15.73■□□□□ 0.11
CXCL1-201ENST00000395761 E2F3O00716 465 aa15.73■□□□□ 0.11
CXCL1-201ENST00000395761 COPEO14579 308 aa15.73■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms