RNA–Protein interactions for RNA: ENST00000394820.8

NFKB1-202, Transcript of nuclear factor kappa B subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NFKB1, Length 3,693 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-202ENST00000394820 HIST2H2ACQ16777 129 aaPredicted RBP12.78□□□□□ -0.36
NFKB1-202ENST00000394820 LEXMQ3ZCV2 418 aa12.78□□□□□ -0.36
NFKB1-202ENST00000394820 BCL7AQ4VC05 210 aa12.78□□□□□ -0.36
NFKB1-202ENST00000394820 ERAP2Q6P179 960 aa12.78□□□□□ -0.36
NFKB1-202ENST00000394820 NFKBIDQ8NI38 313 aa12.78□□□□□ -0.36
NFKB1-202ENST00000394820 RHEBL1Q8TAI7 183 aa12.78□□□□□ -0.36
NFKB1-202ENST00000394820 PSKH2Q96QS6 385 aa12.78□□□□□ -0.36
NFKB1-202ENST00000394820 ZNF382Q96SR6 550 aa12.78□□□□□ -0.36
NFKB1-202ENST00000394820 CCM2Q9BSQ5 444 aa12.78□□□□□ -0.36
NFKB1-202ENST00000394820 TTTY10Q9BZA0 68 aa12.78□□□□□ -0.36
NFKB1-202ENST00000394820 OSGEPL1Q9H4B0 414 aa12.78□□□□□ -0.36
NFKB1-202ENST00000394820 CCNB1IP1Q9NPC3 277 aa12.78□□□□□ -0.36
NFKB1-202ENST00000394820 C5AR2Q9P296 337 aa12.78□□□□□ -0.36
NFKB1-202ENST00000394820 IL20RAQ9UHF4 553 aa12.78□□□□□ -0.36
NFKB1-202ENST00000394820 ERVK-11Q9UQG0 969 aa12.78□□□□□ -0.36
NFKB1-202ENST00000394820 PCDHGA10Q9Y5H3 936 aa12.78□□□□□ -0.36
NFKB1-202ENST00000394820 CFAP20Q9Y6A4 193 aaKnown RBP12.78□□□□□ -0.36
NFKB1-202ENST00000394820 A0A1B0GVM2 712 aa12.78□□□□□ -0.36
NFKB1-202ENST00000394820 FABP12A6NFH5 140 aa12.78□□□□□ -0.36
NFKB1-202ENST00000394820 J3KTA2 159 aa12.78□□□□□ -0.36
NFKB1-202ENST00000394820 KPNA3O00505 521 aaPredicted RBP12.78□□□□□ -0.36
NFKB1-202ENST00000394820 SEMA3DO95025 777 aa12.78□□□□□ -0.36
NFKB1-202ENST00000394820 CCNYL3P0C7X3 344 aa12.78□□□□□ -0.36
NFKB1-202ENST00000394820 ZNF24P17028 368 aa12.78□□□□□ -0.36
NFKB1-202ENST00000394820 CLK3P49761 638 aaKnown RBP12.78□□□□□ -0.36
NFKB1-202ENST00000394820 STK19P49842 368 aaPredicted RBP12.78□□□□□ -0.36
NFKB1-202ENST00000394820 DAPP51397 102 aa12.78□□□□□ -0.36
NFKB1-202ENST00000394820 IFITM3Q01628 133 aa12.78□□□□□ -0.36
NFKB1-202ENST00000394820 MVKQ03426 396 aa12.78□□□□□ -0.36
NFKB1-202ENST00000394820 CACNG1Q06432 222 aa12.78□□□□□ -0.36
NFKB1-202ENST00000394820 IL18Q14116 193 aa12.78□□□□□ -0.36
NFKB1-202ENST00000394820 ADGRF1Q5T601 910 aa12.78□□□□□ -0.36
NFKB1-202ENST00000394820 XAF1Q6GPH4 301 aa12.78□□□□□ -0.36
NFKB1-202ENST00000394820 CCSAPQ6IQ19 270 aaPredicted RBP12.78□□□□□ -0.36
NFKB1-202ENST00000394820 ZNF517Q6ZMY9 492 aaPredicted RBP12.78□□□□□ -0.36
NFKB1-202ENST00000394820 USP30Q70CQ3 517 aa12.78□□□□□ -0.36
NFKB1-202ENST00000394820 DNAJB7Q7Z6W7 309 aaPredicted RBP12.78□□□□□ -0.36
NFKB1-202ENST00000394820 ZNF683Q8IZ20 524 aa12.78□□□□□ -0.36
NFKB1-202ENST00000394820 DNASE1L2Q92874 299 aa12.78□□□□□ -0.36
NFKB1-202ENST00000394820 CDK5RAP1Q96SZ6 601 aaKnown RBP12.78□□□□□ -0.36
NFKB1-202ENST00000394820 TUBA1CQ9BQE3 449 aa12.78□□□□□ -0.36
NFKB1-202ENST00000394820 DUSP26Q9BV47 211 aa12.78□□□□□ -0.36
NFKB1-202ENST00000394820 CXXC1Q9P0U4 656 aaPredicted RBP12.78□□□□□ -0.36
NFKB1-202ENST00000394820 FAM220BPB1ANY3 271 aa12.78□□□□□ -0.36
NFKB1-202ENST00000394820 COQ9O75208 318 aa12.78□□□□□ -0.36
NFKB1-202ENST00000394820 SPNP16150 400 aa12.78□□□□□ -0.36
NFKB1-202ENST00000394820 CYP2A7P20853 494 aa12.78□□□□□ -0.36
NFKB1-202ENST00000394820 GABRR2P28476 465 aa12.78□□□□□ -0.36
NFKB1-202ENST00000394820 RAB8AP61006 207 aa12.78□□□□□ -0.36
NFKB1-202ENST00000394820 IRF5Q13568 498 aa12.78□□□□□ -0.36
NFKB1-202ENST00000394820 TCTN1Q2MV58 587 aa12.78□□□□□ -0.36
NFKB1-202ENST00000394820 DLEU7Q6UYE1 221 aa12.78□□□□□ -0.36
NFKB1-202ENST00000394820 CCDC149Q6ZUS6 474 aa12.78□□□□□ -0.36
NFKB1-202ENST00000394820 NRARPQ7Z6K4 114 aa12.78□□□□□ -0.36
NFKB1-202ENST00000394820 APCDD1Q8J025 514 aa12.78□□□□□ -0.36
NFKB1-202ENST00000394820 FLCNQ8NFG4 579 aa12.78□□□□□ -0.36
NFKB1-202ENST00000394820 OR8H1Q8NGG4 311 aa12.78□□□□□ -0.36
NFKB1-202ENST00000394820 DOK4Q8TEW6 326 aa12.78□□□□□ -0.36
NFKB1-202ENST00000394820 ABCD2Q9UBJ2 740 aa12.78□□□□□ -0.36
NFKB1-202ENST00000394820 PDCD11Q14690 1871 aaKnown RBP12.78□□□□□ -0.36
NFKB1-202ENST00000394820 DRGXA6NNA5 263 aa12.77□□□□□ -0.36
NFKB1-202ENST00000394820 WASH4PA8MWX3 477 aa12.77□□□□□ -0.36
NFKB1-202ENST00000394820 AP3D1O14617 1153 aa12.77□□□□□ -0.36
NFKB1-202ENST00000394820 VNN2O95498 520 aa12.77□□□□□ -0.36
NFKB1-202ENST00000394820 RPS17P08708 135 aaKnown RBP12.77□□□□□ -0.36
NFKB1-202ENST00000394820 CCT3P49368 545 aaKnown RBP12.77□□□□□ -0.36
NFKB1-202ENST00000394820 BTG3Q14201 252 aaPredicted RBP12.77□□□□□ -0.36
NFKB1-202ENST00000394820 CRTC2Q53ET0 693 aaPredicted RBP12.77□□□□□ -0.36
NFKB1-202ENST00000394820 CXorf57Q6NSI4 855 aaKnown RBP12.77□□□□□ -0.36
NFKB1-202ENST00000394820 CADM2Q8N3J6 435 aa12.77□□□□□ -0.36
NFKB1-202ENST00000394820 AQP11Q8NBQ7 271 aa12.77□□□□□ -0.36
NFKB1-202ENST00000394820 HJURPQ8NCD3 748 aaPredicted RBP12.77□□□□□ -0.36
NFKB1-202ENST00000394820 OR6Q1Q8NGQ2 317 aa12.77□□□□□ -0.36
NFKB1-202ENST00000394820 WFDC5Q8TCV5 224 aa12.77□□□□□ -0.36
NFKB1-202ENST00000394820 NLE1Q9NVX2 485 aaPredicted RBP12.77□□□□□ -0.36
NFKB1-202ENST00000394820 SPIN1Q9Y657 262 aaPredicted RBP12.77□□□□□ -0.36
NFKB1-202ENST00000394820 A0A0C4DFX4 3053 aa12.77□□□□□ -0.36
NFKB1-202ENST00000394820 CACNA1IQ9P0X4 2223 aa12.77□□□□□ -0.36
NFKB1-202ENST00000394820 GADD45GO95257 159 aa12.77□□□□□ -0.37
NFKB1-202ENST00000394820 ALDH1A1P00352 501 aa12.77□□□□□ -0.37
NFKB1-202ENST00000394820 FPR1P21462 350 aa12.77□□□□□ -0.37
NFKB1-202ENST00000394820 PAX3P23760 479 aa12.77□□□□□ -0.37
NFKB1-202ENST00000394820 PSMA1P25786 263 aaKnown RBP12.77□□□□□ -0.37
NFKB1-202ENST00000394820 BUD31P41223 144 aaPredicted RBP12.77□□□□□ -0.37
NFKB1-202ENST00000394820 QPRTQ15274 297 aa12.77□□□□□ -0.37
NFKB1-202ENST00000394820 SLC38A4Q969I6 547 aa12.77□□□□□ -0.37
NFKB1-202ENST00000394820 ASPNQ9BXN1 380 aa12.77□□□□□ -0.37
NFKB1-202ENST00000394820 ACOT13Q9NPJ3 140 aa12.77□□□□□ -0.37
NFKB1-202ENST00000394820 HSPB11Q9Y547 144 aa12.77□□□□□ -0.37
NFKB1-202ENST00000394820 YIPF1Q9Y548 306 aa12.77□□□□□ -0.37
NFKB1-202ENST00000394820 BRWD1Q9NSI6 2320 aa12.77□□□□□ -0.37
NFKB1-202ENST00000394820 SPTBP11277 2137 aa12.77□□□□□ -0.37
NFKB1-202ENST00000394820 PDE9AO76083 593 aa12.77□□□□□ -0.37
NFKB1-202ENST00000394820 ISL1P61371 349 aa12.77□□□□□ -0.37
NFKB1-202ENST00000394820 MLLT1Q03111 559 aaPredicted RBP12.77□□□□□ -0.37
NFKB1-202ENST00000394820 DEFB115Q30KQ5 88 aa12.77□□□□□ -0.37
NFKB1-202ENST00000394820 IQCF1Q8N6M8 205 aa12.77□□□□□ -0.37
NFKB1-202ENST00000394820 TCEANCQ8N8B7 351 aa12.77□□□□□ -0.37
NFKB1-202ENST00000394820 C11orf65Q8NCR3 313 aa12.77□□□□□ -0.37
NFKB1-202ENST00000394820 PIGKQ92643 395 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms