RNA–Protein interactions for RNA: ENST00000394253.7

USP49-203, Transcript of ubiquitin specific peptidase 49, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP49, Length 9,034 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-203ENST00000394253 STYXQ8WUJ0 223 aa13.06□□□□□ -0.32
USP49-203ENST00000394253 SLC13A3Q8WWT9 602 aa13.06□□□□□ -0.32
USP49-203ENST00000394253 DAZAP1Q96EP5 407 aaKnown RBP13.06□□□□□ -0.32
USP49-203ENST00000394253 BSCL2Q96G97 398 aaPredicted RBP13.06□□□□□ -0.32
USP49-203ENST00000394253 NUSAP1Q9BXS6 441 aaKnown RBP13.06□□□□□ -0.32
USP49-203ENST00000394253 TDRD6O60522 2096 aaKnown RBP13.06□□□□□ -0.32
USP49-203ENST00000394253 RPP14O95059 124 aaKnown RBP13.06□□□□□ -0.32
USP49-203ENST00000394253 MAP2K3P46734 347 aa13.06□□□□□ -0.32
USP49-203ENST00000394253 TMEM205Q6UW68 189 aa13.06□□□□□ -0.32
USP49-203ENST00000394253 C16orf59Q7L2K0 433 aa13.06□□□□□ -0.32
USP49-203ENST00000394253 THEM6Q8WUY1 208 aa13.06□□□□□ -0.32
USP49-203ENST00000394253 AZIN2Q96A70 460 aa13.06□□□□□ -0.32
USP49-203ENST00000394253 ADAM19Q9H013 955 aa13.06□□□□□ -0.32
USP49-203ENST00000394253 PHPT1Q9NRX4 125 aaPredicted RBP13.06□□□□□ -0.32
USP49-203ENST00000394253 MAP3K4Q9Y6R4 1608 aa13.06□□□□□ -0.32
USP49-203ENST00000394253 NPHS1O60500 1241 aa13.06□□□□□ -0.32
USP49-203ENST00000394253 SBK2P0C263 348 aa13.06□□□□□ -0.32
USP49-203ENST00000394253 TPSB2P20231 275 aa13.06□□□□□ -0.32
USP49-203ENST00000394253 TPSAB1Q15661 275 aa13.06□□□□□ -0.32
USP49-203ENST00000394253 DPYSL2Q16555 572 aa13.06□□□□□ -0.32
USP49-203ENST00000394253 SP8Q8IXZ3 490 aa13.06□□□□□ -0.32
USP49-203ENST00000394253 DNERQ8NFT8 737 aa13.06□□□□□ -0.32
USP49-203ENST00000394253 RNF157Q96PX1 679 aa13.06□□□□□ -0.32
USP49-203ENST00000394253 PAK1IP1Q9NWT1 392 aaPredicted RBP13.06□□□□□ -0.32
USP49-203ENST00000394253 ERVK-25P63136 954 aa13.06□□□□□ -0.32
USP49-203ENST00000394253 PARP15Q460N3 678 aa13.06□□□□□ -0.32
USP49-203ENST00000394253 SEZ6Q53EL9 994 aa13.06□□□□□ -0.32
USP49-203ENST00000394253 CHST9Q7L1S5 443 aa13.06□□□□□ -0.32
USP49-203ENST00000394253 NRROSQ86YC3 692 aa13.06□□□□□ -0.32
USP49-203ENST00000394253 FNDC8Q8TC99 324 aa13.06□□□□□ -0.32
USP49-203ENST00000394253 CCDC74AQ96AQ1 378 aa13.06□□□□□ -0.32
USP49-203ENST00000394253 FAM84AQ96KN4 292 aa13.06□□□□□ -0.32
USP49-203ENST00000394253 ELP3Q9H9T3 547 aa13.06□□□□□ -0.32
USP49-203ENST00000394253 HEBP1Q9NRV9 189 aa13.06□□□□□ -0.32
USP49-203ENST00000394253 ACTR3BQ9P1U1 418 aa13.06□□□□□ -0.32
USP49-203ENST00000394253 PCDHB9Q9Y5E1 797 aa13.06□□□□□ -0.32
USP49-203ENST00000394253 BDNFP23560 247 aa13.05□□□□□ -0.32
USP49-203ENST00000394253 ERVK-8P63133 956 aa13.05□□□□□ -0.32
USP49-203ENST00000394253 SUSD4Q5VX71 490 aa13.05□□□□□ -0.32
USP49-203ENST00000394253 DDX51Q8N8A6 666 aaKnown RBP eCLIP13.05□□□□□ -0.32
USP49-203ENST00000394253 OR7G1Q8NGA0 311 aa13.05□□□□□ -0.32
USP49-203ENST00000394253 SLC22A8Q8TCC7 542 aa13.05□□□□□ -0.32
USP49-203ENST00000394253 CCDC74BQ96LY2 380 aa13.05□□□□□ -0.32
USP49-203ENST00000394253 FZD3Q9NPG1 666 aa13.05□□□□□ -0.32
USP49-203ENST00000394253 SDHAF3Q9NRP4 125 aa13.05□□□□□ -0.32
USP49-203ENST00000394253 FAIMQ9NVQ4 179 aa13.05□□□□□ -0.32
USP49-203ENST00000394253 CD44P16070 742 aaKnown RBP13.05□□□□□ -0.32
USP49-203ENST00000394253 HNRNPA0Q13151 305 aaKnown RBP13.05□□□□□ -0.32
USP49-203ENST00000394253 SLC8B1Q6J4K2 584 aa13.05□□□□□ -0.32
USP49-203ENST00000394253 C4orf19Q8IY42 314 aa13.05□□□□□ -0.32
USP49-203ENST00000394253 FCRL2Q96LA5 508 aaPredicted RBP13.05□□□□□ -0.32
USP49-203ENST00000394253 RDH12Q96NR8 316 aa13.05□□□□□ -0.32
USP49-203ENST00000394253 SYT3Q9BQG1 590 aa13.05□□□□□ -0.32
USP49-203ENST00000394253 ZDHHC4Q9NPG8 344 aa13.05□□□□□ -0.32
USP49-203ENST00000394253 SNTG2Q9NY99 539 aa13.05□□□□□ -0.32
USP49-203ENST00000394253 FBXO7Q9Y3I1 522 aa13.05□□□□□ -0.32
USP49-203ENST00000394253 HTR7P34969 479 aa13.05□□□□□ -0.32
USP49-203ENST00000394253 C1QTNF8P60827 252 aa13.05□□□□□ -0.32
USP49-203ENST00000394253 ZNF33AQ06730 810 aa13.05□□□□□ -0.32
USP49-203ENST00000394253 RIN1Q13671 783 aa13.05□□□□□ -0.32
USP49-203ENST00000394253 FITM2Q8N6M3 262 aa13.05□□□□□ -0.32
USP49-203ENST00000394253 ZNF675Q8TD23 568 aa13.05□□□□□ -0.32
USP49-203ENST00000394253 IL4I1Q96RQ9 567 aa13.05□□□□□ -0.32
USP49-203ENST00000394253 EXOSC1Q9Y3B2 195 aaKnown RBP13.05□□□□□ -0.32
USP49-203ENST00000394253 RNF215Q9Y6U7 377 aa13.05□□□□□ -0.32
USP49-203ENST00000394253 ARHGEF5Q12774 1597 aa13.05□□□□□ -0.32
USP49-203ENST00000394253 LRRTM2O43300 516 aa13.05□□□□□ -0.32
USP49-203ENST00000394253 RAB8AP61006 207 aa13.05□□□□□ -0.32
USP49-203ENST00000394253 GANABQ14697 944 aaKnown RBP13.05□□□□□ -0.32
USP49-203ENST00000394253 RASGRP3Q8IV61 690 aa13.05□□□□□ -0.32
USP49-203ENST00000394253 AQP11Q8NBQ7 271 aa13.05□□□□□ -0.32
USP49-203ENST00000394253 CNOT9Q92600 299 aaKnown RBP13.05□□□□□ -0.32
USP49-203ENST00000394253 CPXM1Q96SM3 734 aa13.05□□□□□ -0.32
USP49-203ENST00000394253 GLTPQ9NZD2 209 aa13.05□□□□□ -0.32
USP49-203ENST00000394253 PTPRJQ12913 1337 aa13.05□□□□□ -0.32
USP49-203ENST00000394253 EEF1E1O43324 174 aaKnown RBP13.05□□□□□ -0.32
USP49-203ENST00000394253 CLCN3P51790 818 aa13.05□□□□□ -0.32
USP49-203ENST00000394253 GRB10Q13322 594 aa13.05□□□□□ -0.32
USP49-203ENST00000394253 CRHR2Q13324 411 aa13.05□□□□□ -0.32
USP49-203ENST00000394253 QPCTQ16769 361 aa13.05□□□□□ -0.32
USP49-203ENST00000394253 OR5T1Q8NG75 326 aa13.05□□□□□ -0.32
USP49-203ENST00000394253 CMKLR1Q99788 373 aa13.05□□□□□ -0.32
USP49-203ENST00000394253 MGAT4BQ9UQ53 548 aa13.05□□□□□ -0.32
USP49-203ENST00000394253 THBS3P49746 956 aa13.05□□□□□ -0.32
USP49-203ENST00000394253 CDK18Q07002 472 aa13.05□□□□□ -0.32
USP49-203ENST00000394253 COQ5Q5HYK3 327 aa13.05□□□□□ -0.32
USP49-203ENST00000394253 UNC93AQ86WB7 457 aa13.05□□□□□ -0.32
USP49-203ENST00000394253 ITPKCQ96DU7 683 aa13.05□□□□□ -0.32
USP49-203ENST00000394253 URM1Q9BTM9 101 aaKnown RBP13.05□□□□□ -0.32
USP49-203ENST00000394253 LRRC4CQ9HCJ2 640 aa13.05□□□□□ -0.32
USP49-203ENST00000394253 EPHB6O15197 1021 aa13.05□□□□□ -0.32
USP49-203ENST00000394253 FRKP42685 505 aaPredicted RBP13.05□□□□□ -0.32
USP49-203ENST00000394253 CDH8P55286 799 aa13.05□□□□□ -0.32
USP49-203ENST00000394253 SLC39A12Q504Y0 691 aa13.05□□□□□ -0.32
USP49-203ENST00000394253 CMTM1Q8IZ96 169 aa13.05□□□□□ -0.32
USP49-203ENST00000394253 OR1J4Q8NGS1 313 aa13.05□□□□□ -0.32
USP49-203ENST00000394253 SPIN2AQ99865 258 aa13.05□□□□□ -0.32
USP49-203ENST00000394253 SPIN2BQ9BPZ2 258 aa13.05□□□□□ -0.32
USP49-203ENST00000394253 C17orf62Q9BQA9 187 aa13.05□□□□□ -0.32
USP49-203ENST00000394253 CENPMQ9NSP4 180 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 867.1 ms