RNA–Protein interactions for RNA: ENST00000393546.8

PDLIM7-204, Transcript of PDZ and LIM domain 7, humanhuman

TSL 3

Gene PDLIM7, Length 671 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-204ENST00000393546 METTL27Q8N6F8 245 aaPredicted RBP18.08■□□□□ 0.48
PDLIM7-204ENST00000393546 TEX9Q8N6V9 391 aa18.08■□□□□ 0.48
PDLIM7-204ENST00000393546 TRPV3Q8NET8 790 aa18.08■□□□□ 0.48
PDLIM7-204ENST00000393546 OR2W6PQ8NHA6 318 aa18.08■□□□□ 0.48
PDLIM7-204ENST00000393546 ZDHHC19Q8WVZ1 309 aaPredicted RBP18.08■□□□□ 0.48
PDLIM7-204ENST00000393546 FKBP10Q96AY3 582 aa18.08■□□□□ 0.48
PDLIM7-204ENST00000393546 MACROD1Q9BQ69 325 aa18.08■□□□□ 0.48
PDLIM7-204ENST00000393546 ROPN1BQ9BZX4 212 aaPredicted RBP18.08■□□□□ 0.48
PDLIM7-204ENST00000393546 DRC3Q9H069 523 aa18.08■□□□□ 0.48
PDLIM7-204ENST00000393546 NT5DC2Q9H857 520 aa18.08■□□□□ 0.48
PDLIM7-204ENST00000393546 ROPN1Q9HAT0 212 aaPredicted RBP18.08■□□□□ 0.48
PDLIM7-204ENST00000393546 SLC22A11Q9NSA0 550 aa18.08■□□□□ 0.48
PDLIM7-204ENST00000393546 GEMIN8Q9NWZ8 242 aaKnown RBP18.08■□□□□ 0.48
PDLIM7-204ENST00000393546 DCDC2Q9UHG0 476 aa18.08■□□□□ 0.48
PDLIM7-204ENST00000393546 ASB1Q9Y576 335 aa18.08■□□□□ 0.48
PDLIM7-204ENST00000393546 MAU2Q9Y6X3 613 aa18.08■□□□□ 0.48
PDLIM7-204ENST00000393546 CFAP47Q6ZTR5 3102 aa18.07■□□□□ 0.48
PDLIM7-204ENST00000393546 NDUFS4O43181 175 aa18.07■□□□□ 0.48
PDLIM7-204ENST00000393546 AVPR1BP47901 424 aa18.07■□□□□ 0.48
PDLIM7-204ENST00000393546 NFKB2Q00653 900 aa18.07■□□□□ 0.48
PDLIM7-204ENST00000393546 RGS1Q08116 209 aa18.07■□□□□ 0.48
PDLIM7-204ENST00000393546 DOC2AQ14183 400 aa18.07■□□□□ 0.48
PDLIM7-204ENST00000393546 PCBP2Q15366 365 aaKnown RBP eCLIP18.07■□□□□ 0.483e-6■■■□□ 18.8
PDLIM7-204ENST00000393546 HIST2H2ACQ16777 129 aaPredicted RBP18.07■□□□□ 0.48
PDLIM7-204ENST00000393546 PAGE2BQ5JRK9 111 aa18.07■□□□□ 0.48
PDLIM7-204ENST00000393546 HIST2H2AA3Q6FI13 130 aa18.07■□□□□ 0.48
PDLIM7-204ENST00000393546 TMEM214Q6NUQ4 689 aaKnown RBP18.07■□□□□ 0.48
PDLIM7-204ENST00000393546 MRPL14Q6P1L8 145 aaKnown RBP18.07■□□□□ 0.48
PDLIM7-204ENST00000393546 TMIGD1Q6UXZ0 262 aa18.07■□□□□ 0.48
PDLIM7-204ENST00000393546 CYP4X1Q8N118 509 aa18.07■□□□□ 0.48
PDLIM7-204ENST00000393546 RIBC1Q8N443 379 aaPredicted RBP18.07■□□□□ 0.48
PDLIM7-204ENST00000393546 ARHGEF39Q8N4T4 335 aa18.07■□□□□ 0.48
PDLIM7-204ENST00000393546 DTWD1Q8N5C7 304 aa18.07■□□□□ 0.48
PDLIM7-204ENST00000393546 PTGR2Q8N8N7 351 aaPredicted RBP18.07■□□□□ 0.48
PDLIM7-204ENST00000393546 TTLQ8NG68 377 aa18.07■□□□□ 0.48
PDLIM7-204ENST00000393546 PHF21BQ96EK2 531 aa18.07■□□□□ 0.48
PDLIM7-204ENST00000393546 WDR34Q96EX3 536 aa18.07■□□□□ 0.48
PDLIM7-204ENST00000393546 PTCD3Q96EY7 689 aaKnown RBP18.07■□□□□ 0.48
PDLIM7-204ENST00000393546 MMABQ96EY8 250 aaPredicted RBP18.07■□□□□ 0.48
PDLIM7-204ENST00000393546 EFCAB11Q9BUY7 163 aa18.07■□□□□ 0.48
PDLIM7-204ENST00000393546 TMEM216Q9P0N5 145 aa18.07■□□□□ 0.48
PDLIM7-204ENST00000393546 PTRH2Q9Y3E5 179 aaKnown RBP18.07■□□□□ 0.48
PDLIM7-204ENST00000393546 A0A0A6YYC8 382 aaPredicted RBP18.06■□□□□ 0.48
PDLIM7-204ENST00000393546 CDC14CA4D256 554 aa18.06■□□□□ 0.48
PDLIM7-204ENST00000393546 I3L1I5 382 aaPredicted RBP18.06■□□□□ 0.48
PDLIM7-204ENST00000393546 FOXS1O43638 330 aa18.06■□□□□ 0.48
PDLIM7-204ENST00000393546 EPORP19235 508 aa18.06■□□□□ 0.48
PDLIM7-204ENST00000393546 TAC1P20366 129 aa18.06■□□□□ 0.48
PDLIM7-204ENST00000393546 FBLP22087 321 aaKnown RBP18.06■□□□□ 0.48
PDLIM7-204ENST00000393546 FOLR3P41439 243 aa18.06■□□□□ 0.48
PDLIM7-204ENST00000393546 CASP2P42575 452 aa18.06■□□□□ 0.48
PDLIM7-204ENST00000393546 PIK3CGP48736 1102 aa18.06■□□□□ 0.48
PDLIM7-204ENST00000393546 CHIT1Q13231 466 aa18.06■□□□□ 0.48
PDLIM7-204ENST00000393546 TBCCQ15814 346 aa18.06■□□□□ 0.48
PDLIM7-204ENST00000393546 UGT8Q16880 541 aa18.06■□□□□ 0.48
PDLIM7-204ENST00000393546 ANKRD53Q8N9V6 530 aa18.06■□□□□ 0.48
PDLIM7-204ENST00000393546 KCT2Q8NC54 265 aa18.06■□□□□ 0.48
PDLIM7-204ENST00000393546 NT5CQ8TCD5 201 aa18.06■□□□□ 0.48
PDLIM7-204ENST00000393546 SLC26A1Q9H2B4 701 aa18.06■□□□□ 0.48
PDLIM7-204ENST00000393546 ANKHQ9HCJ1 492 aa18.06■□□□□ 0.48
PDLIM7-204ENST00000393546 SLC22A7Q9Y694 548 aa18.06■□□□□ 0.48
PDLIM7-204ENST00000393546 ITPR1Q14643 2758 aa18.06■□□□□ 0.48
PDLIM7-204ENST00000393546 CCDC88CQ9P219 2028 aa18.05■□□□□ 0.48
PDLIM7-204ENST00000393546 URADA6NGE7 173 aa18.05■□□□□ 0.48
PDLIM7-204ENST00000393546 ANKDD1BA6NHY2 528 aa18.05■□□□□ 0.48
PDLIM7-204ENST00000393546 LRRC14BA6NHZ5 514 aa18.05■□□□□ 0.48
PDLIM7-204ENST00000393546 H0YIG0 161 aa18.05■□□□□ 0.48
PDLIM7-204ENST00000393546 STX16-NPEPL1H3BU86 382 aa18.05■□□□□ 0.48
PDLIM7-204ENST00000393546 TK2O00142 265 aa18.05■□□□□ 0.48
PDLIM7-204ENST00000393546 STX16O14662 325 aa18.05■□□□□ 0.48
PDLIM7-204ENST00000393546 PRAMEF4O60810 478 aa18.05■□□□□ 0.48
PDLIM7-204ENST00000393546 KLF7O75840 302 aaPredicted RBP18.05■□□□□ 0.48
PDLIM7-204ENST00000393546 ITGB2P05107 769 aa18.05■□□□□ 0.48
PDLIM7-204ENST00000393546 GSTM2P28161 218 aa18.05■□□□□ 0.48
PDLIM7-204ENST00000393546 EEF1DP29692 281 aaKnown RBP18.05■□□□□ 0.48
PDLIM7-204ENST00000393546 OCA2Q04671 838 aa18.05■□□□□ 0.48
PDLIM7-204ENST00000393546 PCDH1Q08174 1060 aa18.05■□□□□ 0.48
PDLIM7-204ENST00000393546 GTF2H2Q13888 395 aa18.05■□□□□ 0.48
PDLIM7-204ENST00000393546 DSG2Q14126 1118 aa18.05■□□□□ 0.48
PDLIM7-204ENST00000393546 SSPNQ14714 243 aa18.05■□□□□ 0.48
PDLIM7-204ENST00000393546 DEFB109BQ30KR1 87 aa18.05■□□□□ 0.48
PDLIM7-204ENST00000393546 ATP1A1-AS1Q5TC04 95 aa18.05■□□□□ 0.48
PDLIM7-204ENST00000393546 PRAMEF9Q5VWM5 478 aa18.05■□□□□ 0.48
PDLIM7-204ENST00000393546 GTF2H2CQ6P1K8 395 aa18.05■□□□□ 0.48
PDLIM7-204ENST00000393546 COX15Q7KZN9 410 aa18.05■□□□□ 0.48
PDLIM7-204ENST00000393546 TMEM151AQ8N4L1 468 aa18.05■□□□□ 0.48
PDLIM7-204ENST00000393546 OR2Y1Q8NGV0 311 aa18.05■□□□□ 0.48
PDLIM7-204ENST00000393546 ZCCHC10Q8TBK6 192 aa18.05■□□□□ 0.48
PDLIM7-204ENST00000393546 UBE2E3Q969T4 207 aa18.05■□□□□ 0.48
PDLIM7-204ENST00000393546 MOCOSQ96EN8 888 aa18.05■□□□□ 0.48
PDLIM7-204ENST00000393546 SEC16BQ96JE7 1060 aa18.05■□□□□ 0.48
PDLIM7-204ENST00000393546 YIPF2Q9BWQ6 316 aa18.05■□□□□ 0.48
PDLIM7-204ENST00000393546 WDR54Q9H977 334 aa18.05■□□□□ 0.48
PDLIM7-204ENST00000393546 COPG2Q9UBF2 871 aa18.05■□□□□ 0.48
PDLIM7-204ENST00000393546 ZNF282Q9UDV7 671 aaPredicted RBP18.05■□□□□ 0.48
PDLIM7-204ENST00000393546 NXT1Q9UKK6 140 aaKnown RBP18.05■□□□□ 0.48
PDLIM7-204ENST00000393546 POLHQ9Y253 713 aa18.05■□□□□ 0.48
PDLIM7-204ENST00000393546 PLAAQ9Y263 795 aa18.05■□□□□ 0.48
PDLIM7-204ENST00000393546 MRPS2Q9Y399 296 aaKnown RBP18.05■□□□□ 0.48
PDLIM7-204ENST00000393546 FOXO6A8MYZ6 492 aa18.04■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms