RNA–Protein interactions for RNA: ENST00000393083.2

PTN-202, Transcript of pleiotrophin, humanhuman

TSL 5 BASIC

Gene PTN, Length 1,599 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTN-202ENST00000393083 LRTM1Q9HBL6 345 aa13.03□□□□□ -0.32
PTN-202ENST00000393083 TAS2R1Q9NYW7 299 aa13.03□□□□□ -0.32
PTN-202ENST00000393083 CCDC167Q9P0B6 97 aa13.03□□□□□ -0.32
PTN-202ENST00000393083 ICKQ9UPZ9 632 aa13.03□□□□□ -0.32
PTN-202ENST00000393083 GPR45Q9Y5Y3 372 aa13.03□□□□□ -0.32
PTN-202ENST00000393083 COLEC10Q9Y6Z7 277 aa13.03□□□□□ -0.32
PTN-202ENST00000393083 COL27A1Q8IZC6 1860 aaPredicted RBP13.02□□□□□ -0.32
PTN-202ENST00000393083 A0A1W2PPV9 198 aa13.02□□□□□ -0.33
PTN-202ENST00000393083 SERTM1A2A2V5 107 aa13.02□□□□□ -0.33
PTN-202ENST00000393083 LILRA5A6NI73 299 aa13.02□□□□□ -0.33
PTN-202ENST00000393083 RSL1D1O76021 490 aaKnown RBP13.02□□□□□ -0.33
PTN-202ENST00000393083 MT-CO3P00414 261 aa13.02□□□□□ -0.33
PTN-202ENST00000393083 KRT16P08779 473 aa13.02□□□□□ -0.33
PTN-202ENST00000393083 C1GALT1C1LP0DN25 315 aa13.02□□□□□ -0.33
PTN-202ENST00000393083 PCNAP12004 261 aa13.02□□□□□ -0.33
PTN-202ENST00000393083 CDH1P12830 882 aa13.02□□□□□ -0.33
PTN-202ENST00000393083 PSMB5P28074 263 aa13.02□□□□□ -0.33
PTN-202ENST00000393083 NDUFS1P28331 727 aa13.02□□□□□ -0.33
PTN-202ENST00000393083 MRPL19P49406 292 aaKnown RBP13.02□□□□□ -0.33
PTN-202ENST00000393083 EPHA4P54764 986 aa13.02□□□□□ -0.33
PTN-202ENST00000393083 CFHR1Q03591 330 aa13.02□□□□□ -0.33
PTN-202ENST00000393083 EMX2Q04743 252 aa13.02□□□□□ -0.33
PTN-202ENST00000393083 ZNF33BQ06732 778 aa13.02□□□□□ -0.33
PTN-202ENST00000393083 CSTF3Q12996 717 aaKnown RBP13.02□□□□□ -0.33
PTN-202ENST00000393083 MAD2L1Q13257 205 aaPredicted RBP13.02□□□□□ -0.33
PTN-202ENST00000393083 DDX39BQ13838 428 aaKnown RBP13.02□□□□□ -0.33
PTN-202ENST00000393083 DNAL1Q4LDG9 190 aa13.02□□□□□ -0.33
PTN-202ENST00000393083 PDCD4Q53EL6 469 aaKnown RBP13.02□□□□□ -0.33
PTN-202ENST00000393083 PAGE2BQ5JRK9 111 aa13.02□□□□□ -0.33
PTN-202ENST00000393083 MED27Q6P2C8 311 aa13.02□□□□□ -0.33
PTN-202ENST00000393083 NXPE4Q6UWF7 544 aa13.02□□□□□ -0.33
PTN-202ENST00000393083 C17orf64Q86WR6 236 aa13.02□□□□□ -0.33
PTN-202ENST00000393083 ZFAND4Q86XD8 727 aa13.02□□□□□ -0.33
PTN-202ENST00000393083 MARCH9Q86YJ5 346 aa13.02□□□□□ -0.33
PTN-202ENST00000393083 TRIM48Q8IWZ4 208 aa13.02□□□□□ -0.33
PTN-202ENST00000393083 RBM12BQ8IXT5 1001 aaKnown RBP13.02□□□□□ -0.33
PTN-202ENST00000393083 GALNT15Q8N3T1 639 aa13.02□□□□□ -0.33
PTN-202ENST00000393083 LINC01555Q8NAE3 123 aa13.02□□□□□ -0.33
PTN-202ENST00000393083 RCN3Q96D15 328 aa13.02□□□□□ -0.33
PTN-202ENST00000393083 REPS1Q96D71 796 aa13.02□□□□□ -0.33
PTN-202ENST00000393083 LDHAL6BQ9BYZ2 381 aaPredicted RBP13.02□□□□□ -0.33
PTN-202ENST00000393083 BRINP2Q9C0B6 783 aa13.02□□□□□ -0.33
PTN-202ENST00000393083 PRM3Q9NNZ6 103 aa13.02□□□□□ -0.33
PTN-202ENST00000393083 SDR39U1Q9NRG7 319 aaPredicted RBP13.02□□□□□ -0.33
PTN-202ENST00000393083 C1orf109Q9NX04 203 aa13.02□□□□□ -0.33
PTN-202ENST00000393083 NOP53Q9NZM5 478 aaKnown RBP13.02□□□□□ -0.33
PTN-202ENST00000393083 KLK13Q9UKR3 277 aa13.02□□□□□ -0.33
PTN-202ENST00000393083 PCDHGA11Q9Y5H2 935 aa13.02□□□□□ -0.33
PTN-202ENST00000393083 NCOR2Q9Y618 2525 aa13.02□□□□□ -0.33
PTN-202ENST00000393083 PIPSLA2A3N6 862 aa13.01□□□□□ -0.33
PTN-202ENST00000393083 NR5A2O00482 541 aa13.01□□□□□ -0.33
PTN-202ENST00000393083 SPINK2P20155 84 aa13.01□□□□□ -0.33
PTN-202ENST00000393083 NUDT2P50583 147 aa13.01□□□□□ -0.33
PTN-202ENST00000393083 PDX1P52945 283 aa13.01□□□□□ -0.33
PTN-202ENST00000393083 SHC2P98077 582 aa13.01□□□□□ -0.33
PTN-202ENST00000393083 LAPTM5Q13571 262 aa13.01□□□□□ -0.33
PTN-202ENST00000393083 GPR18Q14330 331 aa13.01□□□□□ -0.33
PTN-202ENST00000393083 SMU1Q2TAY7 513 aa13.01□□□□□ -0.33
PTN-202ENST00000393083 RFTN2Q52LD8 501 aaPredicted RBP13.01□□□□□ -0.33
PTN-202ENST00000393083 IL23RQ5VWK5 629 aa13.01□□□□□ -0.33
PTN-202ENST00000393083 NKAIN2Q5VXU1 208 aa13.01□□□□□ -0.33
PTN-202ENST00000393083 TMPRSS9Q7Z410 1059 aa13.01□□□□□ -0.33
PTN-202ENST00000393083 RNF175Q8N4F7 328 aa13.01□□□□□ -0.33
PTN-202ENST00000393083 ZFPM2Q8WW38 1151 aa13.01□□□□□ -0.33
PTN-202ENST00000393083 MCUR1Q96AQ8 359 aa13.01□□□□□ -0.33
PTN-202ENST00000393083 GFM1Q96RP9 751 aaKnown RBP13.01□□□□□ -0.33
PTN-202ENST00000393083 SCNM1Q9BWG6 230 aa13.01□□□□□ -0.33
PTN-202ENST00000393083 CADM1Q9BY67 442 aaKnown RBP13.01□□□□□ -0.33
PTN-202ENST00000393083 C1orf21Q9H246 121 aa13.01□□□□□ -0.33
PTN-202ENST00000393083 PELI2Q9HAT8 420 aa13.01□□□□□ -0.33
PTN-202ENST00000393083 GEMIN8Q9NWZ8 242 aaKnown RBP13.01□□□□□ -0.33
PTN-202ENST00000393083 ATXN7L1Q9ULK2 861 aaPredicted RBP13.01□□□□□ -0.33
PTN-202ENST00000393083 CLCA2Q9UQC9 943 aa13.01□□□□□ -0.33
PTN-202ENST00000393083 EIF3LQ9Y262 564 aaKnown RBP13.01□□□□□ -0.33
PTN-202ENST00000393083 PTPRBP23467 1997 aa13.01□□□□□ -0.33
PTN-202ENST00000393083 FAM149AA5PLN7 773 aa13□□□□□ -0.33
PTN-202ENST00000393083 D6RAR5 112 aa13□□□□□ -0.33
PTN-202ENST00000393083 AIM2O14862 343 aa13□□□□□ -0.33
PTN-202ENST00000393083 ZW10O43264 779 aa13□□□□□ -0.33
PTN-202ENST00000393083 SEC22BO75396 215 aa13□□□□□ -0.33
PTN-202ENST00000393083 SNRPB2P08579 225 aaKnown RBP13□□□□□ -0.33
PTN-202ENST00000393083 HSD3B1P14060 373 aa13□□□□□ -0.33
PTN-202ENST00000393083 PRPH2P23942 346 aa13□□□□□ -0.33
PTN-202ENST00000393083 HSD3B2P26439 372 aa13□□□□□ -0.33
PTN-202ENST00000393083 SHMT2P34897 504 aa13□□□□□ -0.33
PTN-202ENST00000393083 CPOXP36551 454 aa13□□□□□ -0.33
PTN-202ENST00000393083 GPLD1P80108 840 aa13□□□□□ -0.33
PTN-202ENST00000393083 SLC25A3Q00325 362 aa13□□□□□ -0.33
PTN-202ENST00000393083 MEF2AQ02078 507 aaPredicted RBP13□□□□□ -0.33
PTN-202ENST00000393083 SPIDRQ14159 915 aa13□□□□□ -0.33
PTN-202ENST00000393083 CLPPQ16740 277 aaPredicted RBP13□□□□□ -0.33
PTN-202ENST00000393083 HIST2H2ACQ16777 129 aaPredicted RBP13□□□□□ -0.33
PTN-202ENST00000393083 AMZ1Q400G9 498 aa13□□□□□ -0.33
PTN-202ENST00000393083 HIST2H2AA3Q6FI13 130 aa13□□□□□ -0.33
PTN-202ENST00000393083 CYP20A1Q6UW02 462 aa13□□□□□ -0.33
PTN-202ENST00000393083 ZNF574Q6ZN55 896 aaPredicted RBP13□□□□□ -0.33
PTN-202ENST00000393083 RBM44Q6ZP01 1051 aaKnown RBP13□□□□□ -0.33
PTN-202ENST00000393083 USP53Q70EK8 1073 aa13□□□□□ -0.33
PTN-202ENST00000393083 OR7G3Q8NG95 312 aa13□□□□□ -0.33
PTN-202ENST00000393083 JPH3Q8WXH2 748 aaPredicted RBP13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms