RNA–Protein interactions for RNA: ENST00000378169.7

NPHP4-203, Transcript of nephrocystin 4, humanhuman

TSL 1 (best)

Gene NPHP4, Length 4,213 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-203ENST00000378169 TIMP1P01033 207 aa12.76□□□□□ -0.37
NPHP4-203ENST00000378169 SRP54P61011 504 aaKnown RBP12.76□□□□□ -0.37
NPHP4-203ENST00000378169 ADAM17P78536 824 aa12.76□□□□□ -0.37
NPHP4-203ENST00000378169 ID2Q02363 134 aa12.76□□□□□ -0.37
NPHP4-203ENST00000378169 HYAL2Q12891 473 aa12.76□□□□□ -0.37
NPHP4-203ENST00000378169 BNIP3Q12983 259 aa12.76□□□□□ -0.37
NPHP4-203ENST00000378169 RAPSNQ13702 412 aa12.76□□□□□ -0.37
NPHP4-203ENST00000378169 AMZ1Q400G9 498 aa12.76□□□□□ -0.37
NPHP4-203ENST00000378169 OTUD1Q5VV17 481 aaPredicted RBP12.76□□□□□ -0.37
NPHP4-203ENST00000378169 KBTBD6Q86V97 674 aa12.76□□□□□ -0.37
NPHP4-203ENST00000378169 ZFAND4Q86XD8 727 aa12.76□□□□□ -0.37
NPHP4-203ENST00000378169 GALNT15Q8N3T1 639 aa12.76□□□□□ -0.37
NPHP4-203ENST00000378169 SMARCD2Q92925 531 aa12.76□□□□□ -0.37
NPHP4-203ENST00000378169 FCRL4Q96PJ5 515 aa12.76□□□□□ -0.37
NPHP4-203ENST00000378169 GPATCH1Q9BRR8 931 aaKnown RBP12.76□□□□□ -0.37
NPHP4-203ENST00000378169 OR51V1Q9H2C8 321 aa12.76□□□□□ -0.37
NPHP4-203ENST00000378169 POLMQ9NP87 494 aaPredicted RBP12.76□□□□□ -0.37
NPHP4-203ENST00000378169 CLEC4AQ9UMR7 237 aa12.76□□□□□ -0.37
NPHP4-203ENST00000378169 OR1A2Q9Y585 309 aa12.76□□□□□ -0.37
NPHP4-203ENST00000378169 FAM86C2PA6NEL3 165 aa12.76□□□□□ -0.37
NPHP4-203ENST00000378169 B3GALT2O43825 422 aa12.76□□□□□ -0.37
NPHP4-203ENST00000378169 SLC25A12O75746 678 aa12.76□□□□□ -0.37
NPHP4-203ENST00000378169 JAK1P23458 1154 aa12.76□□□□□ -0.37
NPHP4-203ENST00000378169 CCT3P49368 545 aaKnown RBP12.76□□□□□ -0.37
NPHP4-203ENST00000378169 COX10Q12887 443 aa12.76□□□□□ -0.37
NPHP4-203ENST00000378169 KANK2Q63ZY3 851 aa12.76□□□□□ -0.37
NPHP4-203ENST00000378169 RSPO2Q6UXX9 243 aaPredicted RBP12.76□□□□□ -0.37
NPHP4-203ENST00000378169 PRR23BQ6ZRT6 265 aa12.76□□□□□ -0.37
NPHP4-203ENST00000378169 CNTN4Q8IWV2 1026 aa12.76□□□□□ -0.37
NPHP4-203ENST00000378169 SLC22A15Q8IZD6 547 aa12.76□□□□□ -0.37
NPHP4-203ENST00000378169 CLECL1Q8IZS7 167 aa12.76□□□□□ -0.37
NPHP4-203ENST00000378169 SPRTNQ9H040 489 aaPredicted RBP12.76□□□□□ -0.37
NPHP4-203ENST00000378169 FZD3Q9NPG1 666 aa12.76□□□□□ -0.37
NPHP4-203ENST00000378169 PCDH10Q9P2E7 1040 aa12.76□□□□□ -0.37
NPHP4-203ENST00000378169 PCDHGA7Q9Y5G6 932 aa12.76□□□□□ -0.37
NPHP4-203ENST00000378169 WASH3PC4AMC7 463 aa12.75□□□□□ -0.37
NPHP4-203ENST00000378169 C1GALT1C1LP0DN25 315 aa12.75□□□□□ -0.37
NPHP4-203ENST00000378169 HSD17B2P37059 387 aa12.75□□□□□ -0.37
NPHP4-203ENST00000378169 GALNT1Q10472 559 aaPredicted RBP12.75□□□□□ -0.37
NPHP4-203ENST00000378169 CYBRD1Q53TN4 286 aa12.75□□□□□ -0.37
NPHP4-203ENST00000378169 RTL4Q6ZR62 310 aa12.75□□□□□ -0.37
NPHP4-203ENST00000378169 HUS1BQ8NHY5 278 aa12.75□□□□□ -0.37
NPHP4-203ENST00000378169 ZNF347Q96SE7 839 aa12.75□□□□□ -0.37
NPHP4-203ENST00000378169 ATOH8Q96SQ7 321 aa12.75□□□□□ -0.37
NPHP4-203ENST00000378169 RAB11FIP5Q9BXF6 653 aa12.75□□□□□ -0.37
NPHP4-203ENST00000378169 STMN3Q9NZ72 180 aa12.75□□□□□ -0.37
NPHP4-203ENST00000378169 ACSL6Q9UKU0 697 aa12.75□□□□□ -0.37
NPHP4-203ENST00000378169 CENPXA8MT69 81 aa12.75□□□□□ -0.37
NPHP4-203ENST00000378169 LOC110117498-PIK3R3F6TDL0 507 aa12.75□□□□□ -0.37
NPHP4-203ENST00000378169 TPP2P29144 1249 aaPredicted RBP12.75□□□□□ -0.37
NPHP4-203ENST00000378169 MGAT3Q09327 533 aa12.75□□□□□ -0.37
NPHP4-203ENST00000378169 ZNF544Q6NX49 715 aa12.75□□□□□ -0.37
NPHP4-203ENST00000378169 DEFB119Q8N690 84 aa12.75□□□□□ -0.37
NPHP4-203ENST00000378169 GPR150Q8NGU9 434 aa12.75□□□□□ -0.37
NPHP4-203ENST00000378169 LRIG1Q96JA1 1093 aa12.75□□□□□ -0.37
NPHP4-203ENST00000378169 F2RL3Q96RI0 385 aa12.75□□□□□ -0.37
NPHP4-203ENST00000378169 KCNH6Q9H252 994 aa12.75□□□□□ -0.37
NPHP4-203ENST00000378169 XPNPEP2O43895 674 aa12.75□□□□□ -0.37
NPHP4-203ENST00000378169 NPPAP01160 153 aa12.75□□□□□ -0.37
NPHP4-203ENST00000378169 HNRNPA1P09651 372 aaKnown RBP eCLIP12.75□□□□□ -0.37
NPHP4-203ENST00000378169 TCF3P15923 654 aa12.75□□□□□ -0.37
NPHP4-203ENST00000378169 FPR1P21462 350 aa12.75□□□□□ -0.37
NPHP4-203ENST00000378169 ELK4P28324 431 aa12.75□□□□□ -0.37
NPHP4-203ENST00000378169 ZNF846Q147U1 533 aa12.75□□□□□ -0.37
NPHP4-203ENST00000378169 LIPJQ5W064 366 aa12.75□□□□□ -0.37
NPHP4-203ENST00000378169 IZUMO1Q8IYV9 350 aa12.75□□□□□ -0.37
NPHP4-203ENST00000378169 RHBDF1Q96CC6 855 aa12.75□□□□□ -0.37
NPHP4-203ENST00000378169 APIPQ96GX9 242 aa12.75□□□□□ -0.37
NPHP4-203ENST00000378169 A0A1W2PQU0 124 aa12.74□□□□□ -0.37
NPHP4-203ENST00000378169 H3BNH8 94 aa12.74□□□□□ -0.37
NPHP4-203ENST00000378169 HCN1O60741 890 aa12.74□□□□□ -0.37
NPHP4-203ENST00000378169 JUPP14923 745 aa12.74□□□□□ -0.37
NPHP4-203ENST00000378169 TCEA1P23193 301 aaKnown RBP12.74□□□□□ -0.37
NPHP4-203ENST00000378169 RPS26P62854 115 aaKnown RBP12.74□□□□□ -0.37
NPHP4-203ENST00000378169 ZXDBP98169 803 aa12.74□□□□□ -0.37
NPHP4-203ENST00000378169 ZSWIM7Q19AV6 140 aa12.74□□□□□ -0.37
NPHP4-203ENST00000378169 PYDC2Q56P42 97 aa12.74□□□□□ -0.37
NPHP4-203ENST00000378169 ARMC3Q5W041 872 aa12.74□□□□□ -0.37
NPHP4-203ENST00000378169 USP30Q70CQ3 517 aa12.74□□□□□ -0.37
NPHP4-203ENST00000378169 GHDCQ8N2G8 530 aa12.74□□□□□ -0.37
NPHP4-203ENST00000378169 TTLQ8NG68 377 aa12.74□□□□□ -0.37
NPHP4-203ENST00000378169 NRG4Q8WWG1 115 aa12.74□□□□□ -0.37
NPHP4-203ENST00000378169 KCNN1Q92952 543 aa12.74□□□□□ -0.37
NPHP4-203ENST00000378169 SLC22A18Q96BI1 424 aa12.74□□□□□ -0.37
NPHP4-203ENST00000378169 CEP295NLQ96MC4 621 aa12.74□□□□□ -0.37
NPHP4-203ENST00000378169 GAS2L1Q99501 681 aaPredicted RBP12.74□□□□□ -0.37
NPHP4-203ENST00000378169 REEP4Q9H6H4 257 aa12.74□□□□□ -0.37
NPHP4-203ENST00000378169 CMTM6Q9NX76 183 aa12.74□□□□□ -0.37
NPHP4-203ENST00000378169 PRSS21Q9Y6M0 314 aa12.74□□□□□ -0.37
NPHP4-203ENST00000378169 A0A1W2PPW3 197 aa12.74□□□□□ -0.37
NPHP4-203ENST00000378169 E7EQ34 232 aa12.74□□□□□ -0.37
NPHP4-203ENST00000378169 EEDO75530 441 aaKnown RBP12.74□□□□□ -0.37
NPHP4-203ENST00000378169 FGF4P08620 206 aa12.74□□□□□ -0.37
NPHP4-203ENST00000378169 IL3P08700 152 aa12.74□□□□□ -0.37
NPHP4-203ENST00000378169 CD36P16671 472 aa12.74□□□□□ -0.37
NPHP4-203ENST00000378169 KDELR2P33947 212 aa12.74□□□□□ -0.37
NPHP4-203ENST00000378169 PIGFQ07326 219 aa12.74□□□□□ -0.37
NPHP4-203ENST00000378169 VMACQ2NL98 169 aa12.74□□□□□ -0.37
NPHP4-203ENST00000378169 RFLNAQ6ZTI6 216 aa12.74□□□□□ -0.37
NPHP4-203ENST00000378169 ADGRG6Q86SQ4 1221 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms