RNA–Protein interactions for RNA: ENST00000377349.6

CBWD3-204, Transcript of COBW domain containing 3, humanhuman

TSL 2

Gene CBWD3, Length 1,403 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-204ENST00000377349 LRRC8EQ6NSJ5 796 aa18.14■□□□□ 0.49
CBWD3-204ENST00000377349 RIPOR1Q6ZS17 1223 aa18.14■□□□□ 0.49
CBWD3-204ENST00000377349 CAPN12Q6ZSI9 719 aa18.14■□□□□ 0.49
CBWD3-204ENST00000377349 LRRC56Q8IYG6 542 aaPredicted RBP18.14■□□□□ 0.49
CBWD3-204ENST00000377349 ITLN2Q8WWU7 325 aaPredicted RBP18.14■□□□□ 0.49
CBWD3-204ENST00000377349 SLCO2A1Q92959 643 aa18.14■□□□□ 0.49
CBWD3-204ENST00000377349 IMMP1LQ96LU5 166 aa18.14■□□□□ 0.49
CBWD3-204ENST00000377349 MKKSQ9NPJ1 570 aaPredicted RBP18.14■□□□□ 0.49
CBWD3-204ENST00000377349 PDE10AQ9Y233 779 aa18.14■□□□□ 0.49
CBWD3-204ENST00000377349 C2CD3Q4AC94 2353 aa18.13■□□□□ 0.49
CBWD3-204ENST00000377349 PRPF4O43172 522 aaKnown RBP eCLIP18.13■□□□□ 0.49
CBWD3-204ENST00000377349 AHSGP02765 367 aa18.13■□□□□ 0.49
CBWD3-204ENST00000377349 C8GP07360 202 aa18.13■□□□□ 0.49
CBWD3-204ENST00000377349 HIST1H2AGP0C0S8 130 aaPredicted RBP18.13■□□□□ 0.49
CBWD3-204ENST00000377349 HIST1H2ADP20671 130 aa18.13■□□□□ 0.49
CBWD3-204ENST00000377349 MST1P26927 711 aa18.13■□□□□ 0.49
CBWD3-204ENST00000377349 GABRB3P28472 473 aa18.13■□□□□ 0.49
CBWD3-204ENST00000377349 GRNP28799 593 aaKnown RBP18.13■□□□□ 0.49
CBWD3-204ENST00000377349 SKIV2L2P42285 1042 aaKnown RBP18.13■□□□□ 0.49
CBWD3-204ENST00000377349 ARL4CP56559 192 aa18.13■□□□□ 0.49
CBWD3-204ENST00000377349 MRPS25P82663 173 aaKnown RBP18.13■□□□□ 0.49
CBWD3-204ENST00000377349 MAT1AQ00266 395 aaKnown RBP18.13■□□□□ 0.49
CBWD3-204ENST00000377349 RELAQ04206 551 aa18.13■□□□□ 0.49
CBWD3-204ENST00000377349 TRMT10BQ6PF06 316 aaKnown RBP18.13■□□□□ 0.49
CBWD3-204ENST00000377349 SYDE1Q6ZW31 735 aaPredicted RBP18.13■□□□□ 0.49
CBWD3-204ENST00000377349 CREG2Q8IUH2 290 aa18.13■□□□□ 0.49
CBWD3-204ENST00000377349 SNF8Q96H20 258 aa18.13■□□□□ 0.49
CBWD3-204ENST00000377349 HIST1H2AHQ96KK5 128 aa18.13■□□□□ 0.49
CBWD3-204ENST00000377349 CCDC138Q96M89 665 aa18.13■□□□□ 0.49
CBWD3-204ENST00000377349 RUNDC3BQ96NL0 473 aa18.13■□□□□ 0.49
CBWD3-204ENST00000377349 KRT12Q99456 494 aa18.13■□□□□ 0.49
CBWD3-204ENST00000377349 HIST1H2AJQ99878 128 aa18.13■□□□□ 0.49
CBWD3-204ENST00000377349 MACROD1Q9BQ69 325 aa18.13■□□□□ 0.49
CBWD3-204ENST00000377349 H2AFJQ9BTM1 129 aa18.13■□□□□ 0.49
CBWD3-204ENST00000377349 DRC3Q9H069 523 aa18.13■□□□□ 0.49
CBWD3-204ENST00000377349 RNF32Q9H0A6 362 aa18.13■□□□□ 0.49
CBWD3-204ENST00000377349 PRSS44E7EML9 344 aa18.12■□□□□ 0.49
CBWD3-204ENST00000377349 EIF3FO00303 357 aaPredicted RBP18.12■□□□□ 0.49
CBWD3-204ENST00000377349 WISP2O76076 250 aa18.12■□□□□ 0.49
CBWD3-204ENST00000377349 HEXBP07686 556 aa18.12■□□□□ 0.49
CBWD3-204ENST00000377349 CXCR2P25025 360 aa18.12■□□□□ 0.49
CBWD3-204ENST00000377349 NAE1Q13564 534 aa18.12■□□□□ 0.49
CBWD3-204ENST00000377349 HECTD2Q5U5R9 776 aa18.12■□□□□ 0.49
CBWD3-204ENST00000377349 HIBCHQ6NVY1 386 aaPredicted RBP18.12■□□□□ 0.49
CBWD3-204ENST00000377349 AGTRAPQ6RW13 159 aa18.12■□□□□ 0.49
CBWD3-204ENST00000377349 ZCCHC10Q8TBK6 192 aa18.12■□□□□ 0.49
CBWD3-204ENST00000377349 PARVBQ9HBI1 364 aa18.12■□□□□ 0.49
CBWD3-204ENST00000377349 ARL15Q9NXU5 204 aa18.12■□□□□ 0.49
CBWD3-204ENST00000377349 ZFATQ9P243 1243 aa18.12■□□□□ 0.49
CBWD3-204ENST00000377349 ABI3Q9P2A4 366 aa18.12■□□□□ 0.49
CBWD3-204ENST00000377349 COPG2Q9UBF2 871 aa18.12■□□□□ 0.49
CBWD3-204ENST00000377349 SH2B3Q9UQQ2 575 aa18.12■□□□□ 0.49
CBWD3-204ENST00000377349 FEZF1A0PJY2 475 aa18.11■□□□□ 0.49
CBWD3-204ENST00000377349 EFCAB8A8MWE9 144 aa18.11■□□□□ 0.49
CBWD3-204ENST00000377349 GUCA1CO95843 209 aa18.11■□□□□ 0.49
CBWD3-204ENST00000377349 IVDP26440 423 aa18.11■□□□□ 0.49
CBWD3-204ENST00000377349 IL2P60568 153 aa18.11■□□□□ 0.49
CBWD3-204ENST00000377349 TIAL1Q01085 375 aaKnown RBP eCLIP18.11■□□□□ 0.49
CBWD3-204ENST00000377349 PDIA2Q13087 525 aaKnown RBP18.11■□□□□ 0.49
CBWD3-204ENST00000377349 SP140Q13342 867 aa18.11■□□□□ 0.49
CBWD3-204ENST00000377349 FAM53BQ14153 422 aa18.11■□□□□ 0.49
CBWD3-204ENST00000377349 NDUFA9Q16795 377 aa18.11■□□□□ 0.49
CBWD3-204ENST00000377349 PHKG1Q16816 387 aa18.11■□□□□ 0.49
CBWD3-204ENST00000377349 TEDDM1Q5T9Z0 273 aa18.11■□□□□ 0.49
CBWD3-204ENST00000377349 KIAA0408Q6ZU52 694 aa18.11■□□□□ 0.49
CBWD3-204ENST00000377349 C17orf64Q86WR6 236 aa18.11■□□□□ 0.49
CBWD3-204ENST00000377349 CNTN4Q8IWV2 1026 aa18.11■□□□□ 0.49
CBWD3-204ENST00000377349 PYCR2Q96C36 320 aa18.11■□□□□ 0.49
CBWD3-204ENST00000377349 MKL2Q9ULH7 1088 aa18.11■□□□□ 0.49
CBWD3-204ENST00000377349 TXNDC9O14530 226 aa18.1■□□□□ 0.49
CBWD3-204ENST00000377349 WFS1O76024 890 aa18.1■□□□□ 0.49
CBWD3-204ENST00000377349 CDH1P12830 882 aa18.1■□□□□ 0.49
CBWD3-204ENST00000377349 AVPR1BP47901 424 aa18.1■□□□□ 0.49
CBWD3-204ENST00000377349 ART3Q13508 389 aa18.1■□□□□ 0.49
CBWD3-204ENST00000377349 GFRALQ6UXV0 394 aa18.1■□□□□ 0.49
CBWD3-204ENST00000377349 PRSS41Q7RTY9 318 aa18.1■□□□□ 0.49
CBWD3-204ENST00000377349 VN1R4Q7Z5H5 301 aa18.1■□□□□ 0.49
CBWD3-204ENST00000377349 FBXO36Q8NEA4 188 aa18.1■□□□□ 0.49
CBWD3-204ENST00000377349 OR9A4Q8NGU2 314 aa18.1■□□□□ 0.49
CBWD3-204ENST00000377349 CCDC120Q96HB5 630 aa18.1■□□□□ 0.49
CBWD3-204ENST00000377349 WDR83Q9BRX9 315 aaKnown RBP18.1■□□□□ 0.49
CBWD3-204ENST00000377349 VN1R1Q9GZP7 353 aa18.1■□□□□ 0.49
CBWD3-204ENST00000377349 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP18.1■□□□□ 0.49
CBWD3-204ENST00000377349 PCBD2Q9H0N5 130 aa18.1■□□□□ 0.49
CBWD3-204ENST00000377349 TMEM184CQ9NVA4 438 aa18.1■□□□□ 0.49
CBWD3-204ENST00000377349 SNX24Q9Y343 169 aa18.1■□□□□ 0.49
CBWD3-204ENST00000377349 HIVEP1P15822 2718 aa18.09■□□□□ 0.49
CBWD3-204ENST00000377349 OR5H15A6NDH6 313 aa18.09■□□□□ 0.49
CBWD3-204ENST00000377349 CCDC188H7C350 402 aa18.09■□□□□ 0.49
CBWD3-204ENST00000377349 SEC31AO94979 1220 aaKnown RBP18.09■□□□□ 0.49
CBWD3-204ENST00000377349 UNC5CO95185 931 aa18.09■□□□□ 0.49
CBWD3-204ENST00000377349 SERPIND1P05546 499 aa18.09■□□□□ 0.49
CBWD3-204ENST00000377349 GRK3P35626 688 aa18.09■□□□□ 0.49
CBWD3-204ENST00000377349 RPS15AP62244 130 aaKnown RBP18.09■□□□□ 0.49
CBWD3-204ENST00000377349 MEF2AQ02078 507 aaPredicted RBP18.09■□□□□ 0.49
CBWD3-204ENST00000377349 FASTKD3Q14CZ7 662 aaKnown RBP18.09■□□□□ 0.49
CBWD3-204ENST00000377349 FAM45BPQ6NSW5 357 aa18.09■□□□□ 0.49
CBWD3-204ENST00000377349 LANCL3Q6ZV70 420 aa18.09■□□□□ 0.49
CBWD3-204ENST00000377349 MCEMP1Q8IX19 187 aa18.09■□□□□ 0.49
CBWD3-204ENST00000377349 FAM45AQ8TCE6 357 aa18.09■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms