RNA–Protein interactions for RNA: ENST00000376854.5

C9orf40-201, Transcript of chromosome 9 open reading frame 40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf40, Length 2,327 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf40-201ENST00000376854 RPL3LQ92901 407 aaKnown RBP24.4■■□□□ 1.5
C9orf40-201ENST00000376854 LGALS12Q96DT0 336 aa24.4■■□□□ 1.5
C9orf40-201ENST00000376854 PAK6Q9NQU5 681 aaPredicted RBP24.4■■□□□ 1.5
C9orf40-201ENST00000376854 CORO2BQ9UQ03 480 aa24.4■■□□□ 1.5
C9orf40-201ENST00000376854 PCDHGA6Q9Y5G7 932 aa24.4■■□□□ 1.5
C9orf40-201ENST00000376854 A0A1W2PQ67 120 aa24.39■■□□□ 1.5
C9orf40-201ENST00000376854 PSIP1O75475 530 aaKnown RBP24.39■■□□□ 1.5
C9orf40-201ENST00000376854 CD36P16671 472 aa24.39■■□□□ 1.5
C9orf40-201ENST00000376854 HNF4AP41235 474 aa24.39■■□□□ 1.5
C9orf40-201ENST00000376854 ASMTP46597 345 aa24.39■■□□□ 1.5
C9orf40-201ENST00000376854 GAB1Q13480 694 aa24.39■■□□□ 1.5
C9orf40-201ENST00000376854 HIST2H2ACQ16777 129 aaPredicted RBP24.39■■□□□ 1.5
C9orf40-201ENST00000376854 ASTLQ6HA08 431 aaPredicted RBP24.39■■□□□ 1.5
C9orf40-201ENST00000376854 NPAS3Q8IXF0 933 aa24.39■■□□□ 1.5
C9orf40-201ENST00000376854 HRASLS5Q96KN8 279 aa24.39■■□□□ 1.5
C9orf40-201ENST00000376854 SIGLEC11Q96RL6 698 aa24.39■■□□□ 1.5
C9orf40-201ENST00000376854 CEP44Q9C0F1 390 aa24.39■■□□□ 1.5
C9orf40-201ENST00000376854 BRF2Q9HAW0 419 aa24.39■■□□□ 1.5
C9orf40-201ENST00000376854 SPG21Q9NZD8 308 aa24.39■■□□□ 1.5
C9orf40-201ENST00000376854 STOX2Q9P2F5 926 aaPredicted RBP24.39■■□□□ 1.5
C9orf40-201ENST00000376854 PCDHGB3Q9Y5G1 929 aa24.39■■□□□ 1.5
C9orf40-201ENST00000376854 A0A1W2PRU2 124 aa24.39■■□□□ 1.49
C9orf40-201ENST00000376854 E9PQ18 207 aa24.39■■□□□ 1.49
C9orf40-201ENST00000376854 AP2A2O94973 939 aa24.39■■□□□ 1.49
C9orf40-201ENST00000376854 HSD3B1P14060 373 aa24.39■■□□□ 1.49
C9orf40-201ENST00000376854 PPIBP23284 216 aaKnown RBP24.39■■□□□ 1.49
C9orf40-201ENST00000376854 HSD3B2P26439 372 aa24.39■■□□□ 1.49
C9orf40-201ENST00000376854 TPP2P29144 1249 aaPredicted RBP24.39■■□□□ 1.49
C9orf40-201ENST00000376854 TGFBR2P37173 567 aa24.39■■□□□ 1.49
C9orf40-201ENST00000376854 DDX59Q5T1V6 619 aaKnown RBP eCLIP24.39■■□□□ 1.49
C9orf40-201ENST00000376854 GPR153Q6NV75 609 aa24.39■■□□□ 1.49
C9orf40-201ENST00000376854 ATL1Q8WXF7 558 aa24.39■■□□□ 1.49
C9orf40-201ENST00000376854 DNASE1L2Q92874 299 aa24.39■■□□□ 1.49
C9orf40-201ENST00000376854 FOXJ1Q92949 421 aa24.39■■□□□ 1.49
C9orf40-201ENST00000376854 METTL2AQ96IZ6 378 aaKnown RBP24.39■■□□□ 1.49
C9orf40-201ENST00000376854 OR4K3Q96R72 315 aa24.39■■□□□ 1.49
C9orf40-201ENST00000376854 DOHHQ9BU89 302 aa24.39■■□□□ 1.49
C9orf40-201ENST00000376854 BTBD2Q9BX70 525 aa24.39■■□□□ 1.49
C9orf40-201ENST00000376854 GABARAPL3Q9BY60 117 aa24.39■■□□□ 1.49
C9orf40-201ENST00000376854 PCGF2P35227 344 aa24.38■■□□□ 1.49
C9orf40-201ENST00000376854 CCSMST1Q4G0I0 132 aa24.38■■□□□ 1.49
C9orf40-201ENST00000376854 SYTL3Q4VX76 610 aa24.38■■□□□ 1.49
C9orf40-201ENST00000376854 ANXA8L1Q5VT79 327 aa24.38■■□□□ 1.49
C9orf40-201ENST00000376854 Q6ZVL8 140 aa24.38■■□□□ 1.49
C9orf40-201ENST00000376854 DDX53Q86TM3 631 aaKnown RBP24.38■■□□□ 1.49
C9orf40-201ENST00000376854 PLD3Q8IV08 490 aa24.38■■□□□ 1.49
C9orf40-201ENST00000376854 P3H2Q8IVL5 708 aa24.38■■□□□ 1.49
C9orf40-201ENST00000376854 KCNC2Q96PR1 638 aa24.38■■□□□ 1.49
C9orf40-201ENST00000376854 PADI2Q9Y2J8 665 aa24.38■■□□□ 1.49
C9orf40-201ENST00000376854 PDE4DIPQ5VU43 2346 aa24.38■■□□□ 1.49
C9orf40-201ENST00000376854 ZBBXA8MT70 800 aa24.38■■□□□ 1.49
C9orf40-201ENST00000376854 ZNF30P17039 623 aa24.38■■□□□ 1.49
C9orf40-201ENST00000376854 GSSP48637 474 aa24.38■■□□□ 1.49
C9orf40-201ENST00000376854 CSNK2BP67870 215 aa24.38■■□□□ 1.49
C9orf40-201ENST00000376854 FADDQ13158 208 aa24.38■■□□□ 1.49
C9orf40-201ENST00000376854 FAM124AQ86V42 546 aa24.38■■□□□ 1.49
C9orf40-201ENST00000376854 TMC8Q8IU68 726 aa24.38■■□□□ 1.49
C9orf40-201ENST00000376854 NAGSQ8N159 534 aa24.38■■□□□ 1.49
C9orf40-201ENST00000376854 GPR156Q8NFN8 814 aa24.38■■□□□ 1.49
C9orf40-201ENST00000376854 RC3H2Q9HBD1 1191 aaKnown RBP24.38■■□□□ 1.49
C9orf40-201ENST00000376854 RNF6Q9Y252 685 aa24.38■■□□□ 1.49
C9orf40-201ENST00000376854 MGAT4DA6NG13 374 aa24.37■■□□□ 1.49
C9orf40-201ENST00000376854 CLDN24A6NM45 220 aa24.37■■□□□ 1.49
C9orf40-201ENST00000376854 ADAM23O75077 832 aa24.37■■□□□ 1.49
C9orf40-201ENST00000376854 IDSP22304 550 aa24.37■■□□□ 1.49
C9orf40-201ENST00000376854 TGFBR1P36897 503 aa24.37■■□□□ 1.49
C9orf40-201ENST00000376854 ETV3P41162 512 aa24.37■■□□□ 1.49
C9orf40-201ENST00000376854 UBE2UQ5VVX9 321 aa24.37■■□□□ 1.49
C9orf40-201ENST00000376854 Q6ZPB1 254 aaPredicted RBP24.37■■□□□ 1.49
C9orf40-201ENST00000376854 CAMKMTQ7Z624 323 aa24.37■■□□□ 1.49
C9orf40-201ENST00000376854 SPPL2AQ8TCT8 520 aa24.37■■□□□ 1.49
C9orf40-201ENST00000376854 SLIRPQ9GZT3 109 aaKnown RBP24.37■■□□□ 1.49
C9orf40-201ENST00000376854 EPS8L2Q9H6S3 715 aa24.37■■□□□ 1.49
C9orf40-201ENST00000376854 SH3BP4Q9P0V3 963 aa24.37■■□□□ 1.49
C9orf40-201ENST00000376854 PNMA8BQ9ULN7 279 aaPredicted RBP24.37■■□□□ 1.49
C9orf40-201ENST00000376854 ZNF451Q9Y4E5 1061 aa24.37■■□□□ 1.49
C9orf40-201ENST00000376854 KIAA1671Q9BY89 1806 aa24.37■■□□□ 1.49
C9orf40-201ENST00000376854 TMEM229AB2RXF0 380 aa24.36■■□□□ 1.49
C9orf40-201ENST00000376854 TGM5O43548 720 aa24.36■■□□□ 1.49
C9orf40-201ENST00000376854 VIPP01282 170 aa24.36■■□□□ 1.49
C9orf40-201ENST00000376854 ABCB1P08183 1280 aaPredicted RBP24.36■■□□□ 1.49
C9orf40-201ENST00000376854 CYP2A6P11509 494 aaPredicted RBP24.36■■□□□ 1.49
C9orf40-201ENST00000376854 PREPP48147 710 aa24.36■■□□□ 1.49
C9orf40-201ENST00000376854 RAVER1Q8IY67 606 aaKnown RBP24.36■■□□□ 1.49
C9orf40-201ENST00000376854 MINDY2Q8NBR6 621 aa24.36■■□□□ 1.49
C9orf40-201ENST00000376854 C11orf65Q8NCR3 313 aa24.36■■□□□ 1.49
C9orf40-201ENST00000376854 OR4A15Q8NGL6 344 aa24.36■■□□□ 1.49
C9orf40-201ENST00000376854 COPS4Q9BT78 406 aa24.36■■□□□ 1.49
C9orf40-201ENST00000376854 ITPAQ9BY32 194 aa24.36■■□□□ 1.49
C9orf40-201ENST00000376854 RNF208Q9H0X6 261 aa24.36■■□□□ 1.49
C9orf40-201ENST00000376854 ATAD3AQ9NVI7 634 aa24.36■■□□□ 1.49
C9orf40-201ENST00000376854 OGDHLQ9ULD0 1010 aa24.36■■□□□ 1.49
C9orf40-201ENST00000376854 PAIP2BQ9ULR5 123 aaKnown RBP24.36■■□□□ 1.49
C9orf40-201ENST00000376854 TESMINQ9Y4I5 508 aa24.36■■□□□ 1.49
C9orf40-201ENST00000376854 GNG14A0A1W2PPG7 69 aa24.36■■□□□ 1.49
C9orf40-201ENST00000376854 TTC34A8MYJ7 566 aa24.36■■□□□ 1.49
C9orf40-201ENST00000376854 EFCAB9A8MZ26 197 aa24.36■■□□□ 1.49
C9orf40-201ENST00000376854 TSPAN6O43657 245 aa24.36■■□□□ 1.49
C9orf40-201ENST00000376854 VIPR1P32241 457 aa24.36■■□□□ 1.49
C9orf40-201ENST00000376854 BDKRB1P46663 353 aa24.36■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms