RNA–Protein interactions for RNA: ENST00000376259.6

TNFRSF1B-201, Transcript of TNF receptor superfamily member 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF1B, Length 3,683 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1B-201ENST00000376259 RELTQ969Z4 430 aa13.89□□□□□ -0.19
TNFRSF1B-201ENST00000376259 CIDECQ96AQ7 238 aaPredicted RBP13.89□□□□□ -0.19
TNFRSF1B-201ENST00000376259 DEFB118Q96PH6 123 aa13.89□□□□□ -0.19
TNFRSF1B-201ENST00000376259 TM9SF3Q9HD45 589 aa13.89□□□□□ -0.19
TNFRSF1B-201ENST00000376259 PPT2Q9UMR5 302 aa13.89□□□□□ -0.19
TNFRSF1B-201ENST00000376259 PCDHGA10Q9Y5H3 936 aa13.89□□□□□ -0.19
TNFRSF1B-201ENST00000376259 CTDSP2O14595 271 aa13.89□□□□□ -0.19
TNFRSF1B-201ENST00000376259 SLC28A2O43868 658 aa13.89□□□□□ -0.19
TNFRSF1B-201ENST00000376259 SEC14L2O76054 403 aa13.89□□□□□ -0.19
TNFRSF1B-201ENST00000376259 RPLP0P05388 317 aaKnown RBP13.89□□□□□ -0.19
TNFRSF1B-201ENST00000376259 SLC10A3P09131 477 aa13.89□□□□□ -0.19
TNFRSF1B-201ENST00000376259 TSPAN19P0C672 248 aa13.89□□□□□ -0.19
TNFRSF1B-201ENST00000376259 PIM1P11309 404 aaPredicted RBP13.89□□□□□ -0.19
TNFRSF1B-201ENST00000376259 RPS7P62081 194 aaKnown RBP13.89□□□□□ -0.19
TNFRSF1B-201ENST00000376259 MBTPS1Q14703 1052 aa13.89□□□□□ -0.19
TNFRSF1B-201ENST00000376259 PYDC2Q56P42 97 aa13.89□□□□□ -0.19
TNFRSF1B-201ENST00000376259 XAF1Q6GPH4 301 aa13.89□□□□□ -0.19
TNFRSF1B-201ENST00000376259 LIN28BQ6ZN17 250 aaKnown RBP eCLIP13.89□□□□□ -0.19
TNFRSF1B-201ENST00000376259 OTOP2Q7RTS6 562 aa13.89□□□□□ -0.19
TNFRSF1B-201ENST00000376259 ANKRD13BQ86YJ7 626 aa13.89□□□□□ -0.19
TNFRSF1B-201ENST00000376259 ZNF461Q8TAF7 563 aa13.89□□□□□ -0.19
TNFRSF1B-201ENST00000376259 ZNF675Q8TD23 568 aa13.89□□□□□ -0.19
TNFRSF1B-201ENST00000376259 PEX13Q92968 403 aa13.89□□□□□ -0.19
TNFRSF1B-201ENST00000376259 PLD4Q96BZ4 506 aa13.89□□□□□ -0.19
TNFRSF1B-201ENST00000376259 ALPK1Q96QP1 1244 aa13.89□□□□□ -0.19
TNFRSF1B-201ENST00000376259 MRPL9Q9BYD2 267 aaKnown RBP13.89□□□□□ -0.19
TNFRSF1B-201ENST00000376259 ATP6V1HQ9UI12 483 aa13.89□□□□□ -0.19
TNFRSF1B-201ENST00000376259 MAP1BP46821 2468 aaKnown RBP13.89□□□□□ -0.19
TNFRSF1B-201ENST00000376259 ARID1AO14497 2285 aa13.89□□□□□ -0.19
TNFRSF1B-201ENST00000376259 TRBV23OR9-2A0A075B6M9 112 aa13.88□□□□□ -0.19
TNFRSF1B-201ENST00000376259 PCDH8O95206 1070 aa13.88□□□□□ -0.19
TNFRSF1B-201ENST00000376259 NPPAP01160 153 aa13.88□□□□□ -0.19
TNFRSF1B-201ENST00000376259 BCHEP06276 602 aa13.88□□□□□ -0.19
TNFRSF1B-201ENST00000376259 NR2F1P10589 423 aa13.88□□□□□ -0.19
TNFRSF1B-201ENST00000376259 ATP1B2P14415 290 aaPredicted RBP13.88□□□□□ -0.19
TNFRSF1B-201ENST00000376259 DDX5P17844 614 aaKnown RBP13.88□□□□□ -0.19
TNFRSF1B-201ENST00000376259 GPR1P46091 355 aa13.88□□□□□ -0.19
TNFRSF1B-201ENST00000376259 FKBP1BP68106 108 aa13.88□□□□□ -0.19
TNFRSF1B-201ENST00000376259 SRSF11Q05519 484 aaKnown RBP13.88□□□□□ -0.19
TNFRSF1B-201ENST00000376259 IFI44LQ53G44 452 aa13.88□□□□□ -0.19
TNFRSF1B-201ENST00000376259 GCNT6Q5T4J0 391 aa13.88□□□□□ -0.19
TNFRSF1B-201ENST00000376259 ATG9BQ674R7 924 aa13.88□□□□□ -0.19
TNFRSF1B-201ENST00000376259 CCBE1Q6UXH8 406 aaPredicted RBP13.88□□□□□ -0.19
TNFRSF1B-201ENST00000376259 BCDIN3DQ7Z5W3 292 aaKnown RBP13.88□□□□□ -0.19
TNFRSF1B-201ENST00000376259 LSRQ86X29 649 aaPredicted RBP13.88□□□□□ -0.19
TNFRSF1B-201ENST00000376259 DPP10Q8N608 796 aa13.88□□□□□ -0.19
TNFRSF1B-201ENST00000376259 DPF3Q92784 378 aa13.88□□□□□ -0.19
TNFRSF1B-201ENST00000376259 TANKQ92844 425 aa13.88□□□□□ -0.19
TNFRSF1B-201ENST00000376259 KLK6Q92876 244 aa13.88□□□□□ -0.19
TNFRSF1B-201ENST00000376259 POLR2J2Q9GZM3 115 aaKnown RBP13.88□□□□□ -0.19
TNFRSF1B-201ENST00000376259 EHD1Q9H4M9 534 aa13.88□□□□□ -0.19
TNFRSF1B-201ENST00000376259 RUVBL1Q9Y265 456 aaKnown RBP13.88□□□□□ -0.19
TNFRSF1B-201ENST00000376259 IGLV3-10A0A075B6K4 115 aa13.88□□□□□ -0.19
TNFRSF1B-201ENST00000376259 TRBC2A0A5B9 178 aa13.88□□□□□ -0.19
TNFRSF1B-201ENST00000376259 AOC2O75106 756 aa13.88□□□□□ -0.19
TNFRSF1B-201ENST00000376259 OXSR1O95747 527 aaPredicted RBP13.88□□□□□ -0.19
TNFRSF1B-201ENST00000376259 FHP07954 510 aa13.88□□□□□ -0.19
TNFRSF1B-201ENST00000376259 POLR2EP19388 210 aaKnown RBP13.88□□□□□ -0.19
TNFRSF1B-201ENST00000376259 TCEA1P23193 301 aaKnown RBP13.88□□□□□ -0.19
TNFRSF1B-201ENST00000376259 CLK3P49761 638 aaKnown RBP13.88□□□□□ -0.19
TNFRSF1B-201ENST00000376259 POLR2LP62875 67 aaKnown RBP13.88□□□□□ -0.19
TNFRSF1B-201ENST00000376259 ZNF691Q5VV52 312 aa13.88□□□□□ -0.19
TNFRSF1B-201ENST00000376259 ZNF57Q68EA5 555 aaPredicted RBP13.88□□□□□ -0.19
TNFRSF1B-201ENST00000376259 PHF21AQ96BD5 680 aa13.88□□□□□ -0.19
TNFRSF1B-201ENST00000376259 SIAEQ9HAT2 523 aa13.88□□□□□ -0.19
TNFRSF1B-201ENST00000376259 CACYBPQ9HB71 228 aaKnown RBP13.88□□□□□ -0.19
TNFRSF1B-201ENST00000376259 Q9Y3F1 56 aa13.88□□□□□ -0.19
TNFRSF1B-201ENST00000376259 FAM25AB3EWG3 89 aa13.88□□□□□ -0.19
TNFRSF1B-201ENST00000376259 FAM25CB3EWG5 89 aa13.88□□□□□ -0.19
TNFRSF1B-201ENST00000376259 FAM25GB3EWG6 89 aa13.88□□□□□ -0.19
TNFRSF1B-201ENST00000376259 ARNTLO00327 626 aa13.88□□□□□ -0.19
TNFRSF1B-201ENST00000376259 C7P10643 843 aa13.88□□□□□ -0.19
TNFRSF1B-201ENST00000376259 SSTR4P31391 388 aa13.88□□□□□ -0.19
TNFRSF1B-201ENST00000376259 PPP2R2BQ00005 443 aa13.88□□□□□ -0.19
TNFRSF1B-201ENST00000376259 TARDBPQ13148 414 aaKnown RBP eCLIP13.88□□□□□ -0.192e-6■■■■□ 19.5
TNFRSF1B-201ENST00000376259 C1DQ13901 141 aaKnown RBP13.88□□□□□ -0.19
TNFRSF1B-201ENST00000376259 RPS26P11Q5JNZ5 115 aaPredicted RBP13.88□□□□□ -0.19
TNFRSF1B-201ENST00000376259 CXorf57Q6NSI4 855 aaKnown RBP13.88□□□□□ -0.19
TNFRSF1B-201ENST00000376259 TRIM40Q6P9F5 258 aa13.88□□□□□ -0.19
TNFRSF1B-201ENST00000376259 TPRG1Q6ZUI0 275 aa13.88□□□□□ -0.19
TNFRSF1B-201ENST00000376259 SHFQ7M4L6 423 aa13.88□□□□□ -0.19
TNFRSF1B-201ENST00000376259 DIRAS2Q96HU8 199 aa13.88□□□□□ -0.19
TNFRSF1B-201ENST00000376259 PKMYT1Q99640 499 aa13.88□□□□□ -0.19
TNFRSF1B-201ENST00000376259 RLIMQ9NVW2 624 aa13.88□□□□□ -0.19
TNFRSF1B-201ENST00000376259 IL37Q9NZH6 218 aa13.88□□□□□ -0.19
TNFRSF1B-201ENST00000376259 COMMD3Q9UBI1 195 aa13.88□□□□□ -0.19
TNFRSF1B-201ENST00000376259 WBP11Q9Y2W2 641 aaKnown RBP13.88□□□□□ -0.19
TNFRSF1B-201ENST00000376259 PCDHGA12O60330 932 aa13.87□□□□□ -0.19
TNFRSF1B-201ENST00000376259 TNFRSF21O75509 655 aa13.87□□□□□ -0.19
TNFRSF1B-201ENST00000376259 HLA-EP13747 358 aa13.87□□□□□ -0.19
TNFRSF1B-201ENST00000376259 HOXD10P28358 340 aa13.87□□□□□ -0.19
TNFRSF1B-201ENST00000376259 CTGFP29279 349 aa13.87□□□□□ -0.19
TNFRSF1B-201ENST00000376259 LIPAP38571 399 aa13.87□□□□□ -0.19
TNFRSF1B-201ENST00000376259 PPIGQ13427 754 aaKnown RBP eCLIP13.87□□□□□ -0.19
TNFRSF1B-201ENST00000376259 UBE2UQ5VVX9 321 aa13.87□□□□□ -0.19
TNFRSF1B-201ENST00000376259 NPAS3Q8IXF0 933 aa13.87□□□□□ -0.19
TNFRSF1B-201ENST00000376259 ATL1Q8WXF7 558 aa13.87□□□□□ -0.19
TNFRSF1B-201ENST00000376259 ZNF558Q96NG5 402 aa13.87□□□□□ -0.19
TNFRSF1B-201ENST00000376259 FAM129BQ96TA1 746 aa13.87□□□□□ -0.19
TNFRSF1B-201ENST00000376259 CLMPQ9H6B4 373 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms