RNA–Protein interactions for RNA: ENST00000375315.6

C9orf3-203, Transcript of chromosome 9 open reading frame 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf3, Length 3,136 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-203ENST00000375315 DET1Q7L5Y6 550 aa11.76□□□□□ -0.53
C9orf3-203ENST00000375315 CYP4Z1Q86W10 505 aa11.76□□□□□ -0.53
C9orf3-203ENST00000375315 KRT73Q86Y46 540 aa11.76□□□□□ -0.53
C9orf3-203ENST00000375315 LINC00518Q8N0U6 118 aa11.76□□□□□ -0.53
C9orf3-203ENST00000375315 C12orf76Q8N812 135 aaPredicted RBP11.76□□□□□ -0.53
C9orf3-203ENST00000375315 ZNF675Q8TD23 568 aa11.76□□□□□ -0.53
C9orf3-203ENST00000375315 PTERQ96BW5 349 aa11.76□□□□□ -0.53
C9orf3-203ENST00000375315 ZNF419Q96HQ0 510 aaPredicted RBP11.76□□□□□ -0.53
C9orf3-203ENST00000375315 HYLS1Q96M11 299 aa11.76□□□□□ -0.53
C9orf3-203ENST00000375315 BRINP2Q9C0B6 783 aa11.76□□□□□ -0.53
C9orf3-203ENST00000375315 CATSPERBQ9H7T0 1116 aa11.76□□□□□ -0.53
C9orf3-203ENST00000375315 SP110Q9HB58 689 aa11.76□□□□□ -0.53
C9orf3-203ENST00000375315 INSL6Q9Y581 213 aa11.76□□□□□ -0.53
C9orf3-203ENST00000375315 ZFP37Q9Y6Q3 630 aaPredicted RBP11.76□□□□□ -0.53
C9orf3-203ENST00000375315 CCDC85CA6NKD9 419 aa11.75□□□□□ -0.53
C9orf3-203ENST00000375315 B3GALNT1O75752 331 aa11.75□□□□□ -0.53
C9orf3-203ENST00000375315 RAB25P57735 213 aa11.75□□□□□ -0.53
C9orf3-203ENST00000375315 LAMTOR1Q6IAA8 161 aa11.75□□□□□ -0.53
C9orf3-203ENST00000375315 PLET1Q6UQ28 207 aa11.75□□□□□ -0.53
C9orf3-203ENST00000375315 PTGR2Q8N8N7 351 aaPredicted RBP11.75□□□□□ -0.53
C9orf3-203ENST00000375315 OR8J3Q8NGG0 315 aa11.75□□□□□ -0.53
C9orf3-203ENST00000375315 RHBDF1Q96CC6 855 aa11.75□□□□□ -0.53
C9orf3-203ENST00000375315 PGAP3Q96FM1 320 aaPredicted RBP11.75□□□□□ -0.53
C9orf3-203ENST00000375315 ZNF583Q96ND8 569 aa11.75□□□□□ -0.53
C9orf3-203ENST00000375315 KCNA7Q96RP8 456 aa11.75□□□□□ -0.53
C9orf3-203ENST00000375315 OLA1Q9NTK5 396 aaKnown RBP11.75□□□□□ -0.53
C9orf3-203ENST00000375315 TMEM45AQ9NWC5 275 aa11.75□□□□□ -0.53
C9orf3-203ENST00000375315 NDRG4Q9ULP0 352 aaKnown RBP11.75□□□□□ -0.53
C9orf3-203ENST00000375315 KLK4Q9Y5K2 254 aa11.75□□□□□ -0.53
C9orf3-203ENST00000375315 CD3EAPO15446 510 aaKnown RBP11.75□□□□□ -0.53
C9orf3-203ENST00000375315 IGLV3-25P01717 112 aa11.75□□□□□ -0.53
C9orf3-203ENST00000375315 SLC10A7Q0GE19 358 aa11.75□□□□□ -0.53
C9orf3-203ENST00000375315 DLEU7Q6UYE1 221 aa11.75□□□□□ -0.53
C9orf3-203ENST00000375315 ZFAND4Q86XD8 727 aa11.75□□□□□ -0.53
C9orf3-203ENST00000375315 PHC2Q8IXK0 858 aa11.75□□□□□ -0.53
C9orf3-203ENST00000375315 OR52K2Q8NGK3 314 aa11.75□□□□□ -0.53
C9orf3-203ENST00000375315 AKAP1Q92667 903 aaKnown RBP eCLIP11.75□□□□□ -0.53
C9orf3-203ENST00000375315 COQ8BQ96D53 544 aa11.75□□□□□ -0.53
C9orf3-203ENST00000375315 REPS1Q96D71 796 aa11.75□□□□□ -0.53
C9orf3-203ENST00000375315 DCLRE1CQ96SD1 692 aaKnown RBP11.75□□□□□ -0.53
C9orf3-203ENST00000375315 TRIM62Q9BVG3 475 aa11.75□□□□□ -0.53
C9orf3-203ENST00000375315 IFT22Q9H7X7 185 aa11.75□□□□□ -0.53
C9orf3-203ENST00000375315 FARSBQ9NSD9 589 aaKnown RBP11.75□□□□□ -0.53
C9orf3-203ENST00000375315 F5H5T6 163 aa11.75□□□□□ -0.53
C9orf3-203ENST00000375315 CBX4O00257 560 aa11.75□□□□□ -0.53
C9orf3-203ENST00000375315 RFXAPO00287 272 aa11.75□□□□□ -0.53
C9orf3-203ENST00000375315 CCL22O00626 93 aa11.75□□□□□ -0.53
C9orf3-203ENST00000375315 PPP6CO00743 305 aa11.75□□□□□ -0.53
C9orf3-203ENST00000375315 GRM6O15303 877 aa11.75□□□□□ -0.53
C9orf3-203ENST00000375315 NCAM2O15394 837 aa11.75□□□□□ -0.53
C9orf3-203ENST00000375315 PBX2P40425 430 aa11.75□□□□□ -0.53
C9orf3-203ENST00000375315 RGS6P49758 472 aa11.75□□□□□ -0.53
C9orf3-203ENST00000375315 SCAPQ12770 1279 aa11.75□□□□□ -0.53
C9orf3-203ENST00000375315 GPR19Q15760 415 aa11.75□□□□□ -0.53
C9orf3-203ENST00000375315 SLC35F1Q5T1Q4 408 aa11.75□□□□□ -0.53
C9orf3-203ENST00000375315 KIAA1614Q5VZ46 1190 aa11.75□□□□□ -0.53
C9orf3-203ENST00000375315 DDX53Q86TM3 631 aaKnown RBP11.75□□□□□ -0.53
C9orf3-203ENST00000375315 COMMD7Q86VX2 200 aa11.75□□□□□ -0.53
C9orf3-203ENST00000375315 ARHGAP12Q8IWW6 846 aa11.75□□□□□ -0.53
C9orf3-203ENST00000375315 CARNMT1Q8N4J0 409 aa11.75□□□□□ -0.53
C9orf3-203ENST00000375315 KREMEN2Q8NCW0 462 aa11.75□□□□□ -0.53
C9orf3-203ENST00000375315 POP5Q969H6 163 aaKnown RBP11.75□□□□□ -0.53
C9orf3-203ENST00000375315 AP2M1Q96CW1 435 aa11.75□□□□□ -0.53
C9orf3-203ENST00000375315 MCCC1Q96RQ3 725 aaPredicted RBP11.75□□□□□ -0.53
C9orf3-203ENST00000375315 VAT1Q99536 393 aa11.75□□□□□ -0.53
C9orf3-203ENST00000375315 ZYG11BQ9C0D3 744 aa11.75□□□□□ -0.53
C9orf3-203ENST00000375315 SRRQ9GZT4 340 aa11.75□□□□□ -0.53
C9orf3-203ENST00000375315 GABARAPL1Q9H0R8 117 aa11.75□□□□□ -0.53
C9orf3-203ENST00000375315 IGFLR1Q9H665 355 aa11.75□□□□□ -0.53
C9orf3-203ENST00000375315 TRIM45Q9H8W5 580 aaPredicted RBP11.75□□□□□ -0.53
C9orf3-203ENST00000375315 ABCB8Q9NUT2 735 aa11.75□□□□□ -0.53
C9orf3-203ENST00000375315 V9GYH0 126 aa11.75□□□□□ -0.53
C9orf3-203ENST00000375315 TSC2P49815 1807 aa11.74□□□□□ -0.53
C9orf3-203ENST00000375315 A0A096LPI6 279 aa11.74□□□□□ -0.53
C9orf3-203ENST00000375315 A0A0B4J293 547 aa11.74□□□□□ -0.53
C9orf3-203ENST00000375315 CXCR6O00574 342 aa11.74□□□□□ -0.53
C9orf3-203ENST00000375315 CSF2P04141 144 aa11.74□□□□□ -0.53
C9orf3-203ENST00000375315 TACR2P21452 398 aa11.74□□□□□ -0.53
C9orf3-203ENST00000375315 RPS3P23396 243 aaKnown RBP eCLIP11.74□□□□□ -0.53
C9orf3-203ENST00000375315 C21orf33P30042 268 aaPredicted RBP11.74□□□□□ -0.53
C9orf3-203ENST00000375315 ZNF33BQ06732 778 aa11.74□□□□□ -0.53
C9orf3-203ENST00000375315 PWP1Q13610 501 aa11.74□□□□□ -0.53
C9orf3-203ENST00000375315 RIN1Q13671 783 aa11.74□□□□□ -0.53
C9orf3-203ENST00000375315 GNA13Q14344 377 aa11.74□□□□□ -0.53
C9orf3-203ENST00000375315 TATDN3Q17R31 274 aa11.74□□□□□ -0.53
C9orf3-203ENST00000375315 ZMAT1Q5H9K5 638 aa11.74□□□□□ -0.53
C9orf3-203ENST00000375315 RNF130Q86XS8 419 aa11.74□□□□□ -0.53
C9orf3-203ENST00000375315 VANGL1Q8TAA9 524 aaPredicted RBP11.74□□□□□ -0.53
C9orf3-203ENST00000375315 KLHL6Q8WZ60 621 aa11.74□□□□□ -0.53
C9orf3-203ENST00000375315 HERVK_113Q902F9 699 aa11.74□□□□□ -0.53
C9orf3-203ENST00000375315 TCEAL4Q96EI5 215 aa11.74□□□□□ -0.53
C9orf3-203ENST00000375315 RNF31Q96EP0 1072 aa11.74□□□□□ -0.53
C9orf3-203ENST00000375315 THUMPD3Q9BV44 507 aaKnown RBP11.74□□□□□ -0.53
C9orf3-203ENST00000375315 C11orf54Q9H0W9 315 aaPredicted RBP11.74□□□□□ -0.53
C9orf3-203ENST00000375315 SPNS1Q9H2V7 528 aa11.74□□□□□ -0.53
C9orf3-203ENST00000375315 TMEM245Q9H330 911 aa11.74□□□□□ -0.53
C9orf3-203ENST00000375315 ELF5Q9UKW6 265 aaPredicted RBP11.74□□□□□ -0.53
C9orf3-203ENST00000375315 BACE2Q9Y5Z0 518 aa11.74□□□□□ -0.53
C9orf3-203ENST00000375315 ELOVL7A1L3X0 281 aa11.74□□□□□ -0.53
C9orf3-203ENST00000375315 ATG13O75143 517 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms