RNA–Protein interactions for RNA: ENST00000375290.6

PTCH1-204, Transcript of patched 1, humanhuman

TSL 2

Gene PTCH1, Length 10,631 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-204ENST00000375290 UQCRC2P22695 453 aa9.89□□□□□ -0.83
PTCH1-204ENST00000375290 PRKAG1P54619 331 aa9.89□□□□□ -0.83
PTCH1-204ENST00000375290 NCS1P62166 190 aa9.89□□□□□ -0.83
PTCH1-204ENST00000375290 CDK6Q00534 326 aa9.89□□□□□ -0.83
PTCH1-204ENST00000375290 SNTA1Q13424 505 aa9.89□□□□□ -0.83
PTCH1-204ENST00000375290 ZNF169Q14929 603 aaPredicted RBP9.89□□□□□ -0.83
PTCH1-204ENST00000375290 LRRC66Q68CR7 880 aa9.89□□□□□ -0.83
PTCH1-204ENST00000375290 XKR5Q6UX68 686 aa9.89□□□□□ -0.83
PTCH1-204ENST00000375290 C3P1Q6ZMU1 363 aa9.89□□□□□ -0.83
PTCH1-204ENST00000375290 NLRP8Q86W28 1048 aa9.89□□□□□ -0.83
PTCH1-204ENST00000375290 OR52J3Q8NH60 311 aa9.89□□□□□ -0.83
PTCH1-204ENST00000375290 SLC35F5Q8WV83 523 aa9.89□□□□□ -0.83
PTCH1-204ENST00000375290 GTPBP3Q969Y2 492 aaKnown RBP9.89□□□□□ -0.83
PTCH1-204ENST00000375290 CD244Q9BZW8 370 aa9.89□□□□□ -0.83
PTCH1-204ENST00000375290 ABHD14A-ACY1A0A1B0GW23 586 aa9.89□□□□□ -0.83
PTCH1-204ENST00000375290 RFPL3O75679 317 aa9.89□□□□□ -0.83
PTCH1-204ENST00000375290 TACR2P21452 398 aa9.89□□□□□ -0.83
PTCH1-204ENST00000375290 RPS3P23396 243 aaKnown RBP eCLIP9.89□□□□□ -0.83
PTCH1-204ENST00000375290 AFF1P51825 1210 aaKnown RBP9.89□□□□□ -0.83
PTCH1-204ENST00000375290 TSTQ16762 297 aaKnown RBP9.89□□□□□ -0.83
PTCH1-204ENST00000375290 ABHD13Q7L211 337 aa9.89□□□□□ -0.83
PTCH1-204ENST00000375290 LRIG1Q96JA1 1093 aa9.89□□□□□ -0.83
PTCH1-204ENST00000375290 ZNF436Q9C0F3 470 aaPredicted RBP9.89□□□□□ -0.83
PTCH1-204ENST00000375290 SPON1Q9HCB6 807 aa9.89□□□□□ -0.83
PTCH1-204ENST00000375290 ZNF334Q9HCZ1 680 aaPredicted RBP9.89□□□□□ -0.83
PTCH1-204ENST00000375290 FANCFQ9NPI8 374 aa9.89□□□□□ -0.83
PTCH1-204ENST00000375290 ENAMQ9NRM1 1142 aa9.89□□□□□ -0.83
PTCH1-204ENST00000375290 LGR5O75473 907 aa9.89□□□□□ -0.83
PTCH1-204ENST00000375290 CDK2P24941 298 aa9.89□□□□□ -0.83
PTCH1-204ENST00000375290 RING1Q06587 406 aa9.89□□□□□ -0.83
PTCH1-204ENST00000375290 SPHARQ15513 63 aa9.89□□□□□ -0.83
PTCH1-204ENST00000375290 PHTF2Q8N3S3 785 aa9.89□□□□□ -0.83
PTCH1-204ENST00000375290 NECAB3Q96P71 396 aaPredicted RBP9.89□□□□□ -0.83
PTCH1-204ENST00000375290 NIPAL2Q9H841 368 aa9.89□□□□□ -0.83
PTCH1-204ENST00000375290 AGAP5A6NIR3 686 aa9.89□□□□□ -0.83
PTCH1-204ENST00000375290 OR1I1O60431 355 aa9.89□□□□□ -0.83
PTCH1-204ENST00000375290 ECI2O75521 394 aa9.89□□□□□ -0.83
PTCH1-204ENST00000375290 CLDN10P78369 228 aa9.89□□□□□ -0.83
PTCH1-204ENST00000375290 ILF3Q12906 894 aaKnown RBP eCLIP9.89□□□□□ -0.83
PTCH1-204ENST00000375290 BTBD16Q32M84 506 aa9.89□□□□□ -0.83
PTCH1-204ENST00000375290 ZBED3Q96IU2 234 aaPredicted RBP9.89□□□□□ -0.83
PTCH1-204ENST00000375290 CORO1BQ9BR76 489 aa9.89□□□□□ -0.83
PTCH1-204ENST00000375290 CENPOQ9BU64 300 aa9.89□□□□□ -0.83
PTCH1-204ENST00000375290 PITHD1Q9GZP4 211 aaPredicted RBP9.89□□□□□ -0.83
PTCH1-204ENST00000375290 MKRN2Q9H000 416 aaKnown RBP9.89□□□□□ -0.83
PTCH1-204ENST00000375290 PTPRHQ9HD43 1115 aa9.89□□□□□ -0.83
PTCH1-204ENST00000375290 NLE1Q9NVX2 485 aaPredicted RBP9.89□□□□□ -0.83
PTCH1-204ENST00000375290 TIMM22Q9Y584 194 aa9.89□□□□□ -0.83
PTCH1-204ENST00000375290 ALDOAP04075 364 aaKnown RBP9.89□□□□□ -0.83
PTCH1-204ENST00000375290 NCK1P16333 377 aa9.89□□□□□ -0.83
PTCH1-204ENST00000375290 CD6P30203 668 aa9.89□□□□□ -0.83
PTCH1-204ENST00000375290 GNALP38405 381 aa9.89□□□□□ -0.83
PTCH1-204ENST00000375290 SOX10P56693 466 aa9.89□□□□□ -0.83
PTCH1-204ENST00000375290 CREB3L2Q70SY1 520 aa9.89□□□□□ -0.83
PTCH1-204ENST00000375290 PGBD3Q8N328 593 aa9.89□□□□□ -0.83
PTCH1-204ENST00000375290 C1orf52Q8N6N3 182 aaKnown RBP9.89□□□□□ -0.83
PTCH1-204ENST00000375290 FAM156AQ8NDB6 213 aa9.89□□□□□ -0.83
PTCH1-204ENST00000375290 RNF121Q9H920 327 aa9.89□□□□□ -0.83
PTCH1-204ENST00000375290 FAM86C1Q9NVL1 165 aa9.89□□□□□ -0.83
PTCH1-204ENST00000375290 CLEC4AQ9UMR7 237 aa9.89□□□□□ -0.83
PTCH1-204ENST00000375290 NAALAD2Q9Y3Q0 740 aa9.89□□□□□ -0.83
PTCH1-204ENST00000375290 PCP4L1A6NKN8 68 aa9.88□□□□□ -0.83
PTCH1-204ENST00000375290 IL1AP01583 271 aa9.88□□□□□ -0.83
PTCH1-204ENST00000375290 SMIM10L2AP0DMW4 78 aa9.88□□□□□ -0.83
PTCH1-204ENST00000375290 SMIM10L2BP0DMW5 78 aa9.88□□□□□ -0.83
PTCH1-204ENST00000375290 SLC6A6P31641 620 aa9.88□□□□□ -0.83
PTCH1-204ENST00000375290 C6orf136Q5SQH8 315 aa9.88□□□□□ -0.83
PTCH1-204ENST00000375290 ZFAND4Q86XD8 727 aa9.88□□□□□ -0.83
PTCH1-204ENST00000375290 DDX1Q92499 740 aaKnown RBP9.88□□□□□ -0.83
PTCH1-204ENST00000375290 DMRTB1Q96MA1 342 aa9.88□□□□□ -0.83
PTCH1-204ENST00000375290 EIF2B4Q9UI10 523 aaKnown RBP9.88□□□□□ -0.83
PTCH1-204ENST00000375290 RDH16O75452 317 aa9.88□□□□□ -0.83
PTCH1-204ENST00000375290 HDCP19113 662 aa9.88□□□□□ -0.83
PTCH1-204ENST00000375290 FMO3P31513 532 aa9.88□□□□□ -0.83
PTCH1-204ENST00000375290 ABCG1P45844 678 aa9.88□□□□□ -0.83
PTCH1-204ENST00000375290 RPL6Q02878 288 aaKnown RBP9.88□□□□□ -0.83
PTCH1-204ENST00000375290 KDM1BQ8NB78 822 aa9.88□□□□□ -0.83
PTCH1-204ENST00000375290 PAPD5Q8NDF8 572 aaKnown RBP9.88□□□□□ -0.83
PTCH1-204ENST00000375290 TTPALQ9BTX7 342 aa9.88□□□□□ -0.83
PTCH1-204ENST00000375290 HPF1Q9NWY4 346 aa9.88□□□□□ -0.83
PTCH1-204ENST00000375290 LAMA4Q16363 1823 aa9.88□□□□□ -0.83
PTCH1-204ENST00000375290 ISM1B1AKI9 464 aa9.88□□□□□ -0.83
PTCH1-204ENST00000375290 SNAPINO95295 136 aa9.88□□□□□ -0.83
PTCH1-204ENST00000375290 CSNK2A2P19784 350 aaPredicted RBP9.88□□□□□ -0.83
PTCH1-204ENST00000375290 SLC43A2Q8N370 569 aa9.88□□□□□ -0.83
PTCH1-204ENST00000375290 ABHD11Q8NFV4 315 aa9.88□□□□□ -0.83
PTCH1-204ENST00000375290 LILRB4Q8NHJ6 448 aa9.88□□□□□ -0.83
PTCH1-204ENST00000375290 ART5Q96L15 291 aa9.88□□□□□ -0.83
PTCH1-204ENST00000375290 BHLHE41Q9C0J9 482 aaPredicted RBP9.88□□□□□ -0.83
PTCH1-204ENST00000375290 KLHL42Q9P2K6 505 aa9.88□□□□□ -0.83
PTCH1-204ENST00000375290 MAFFQ9ULX9 164 aa9.88□□□□□ -0.83
PTCH1-204ENST00000375290 GIMAP1-GIMAP5A0A087WTJ2 511 aa9.88□□□□□ -0.83
PTCH1-204ENST00000375290 TRBC2A0A5B9 178 aa9.88□□□□□ -0.83
PTCH1-204ENST00000375290 CDRT1O95170 752 aa9.88□□□□□ -0.83
PTCH1-204ENST00000375290 MAP3K8P41279 467 aa9.88□□□□□ -0.83
PTCH1-204ENST00000375290 SLC3A1Q07837 685 aa9.88□□□□□ -0.83
PTCH1-204ENST00000375290 NIPAL4Q0D2K0 466 aa9.88□□□□□ -0.83
PTCH1-204ENST00000375290 RAB40BQ12829 278 aa9.88□□□□□ -0.83
PTCH1-204ENST00000375290 SLC36A3Q495N2 470 aa9.88□□□□□ -0.83
PTCH1-204ENST00000375290 CDKN2AIPNLQ96HQ2 116 aa9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms