RNA–Protein interactions for RNA: ENST00000374876.4

CCDC40-202, Transcript of coiled-coil domain containing 40, humanhuman

TSL 1 (best) BASIC

Gene CCDC40, Length 2,010 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-202ENST00000374876 SLC31A1O15431 190 aa14.98□□□□□ -0.01
CCDC40-202ENST00000374876 PRSS23O95084 383 aa14.98□□□□□ -0.01
CCDC40-202ENST00000374876 RETP07949 1114 aa14.98□□□□□ -0.01
CCDC40-202ENST00000374876 PCSK2P16519 638 aa14.98□□□□□ -0.01
CCDC40-202ENST00000374876 SDC1P18827 310 aa14.98□□□□□ -0.01
CCDC40-202ENST00000374876 CALRP27797 417 aaKnown RBP14.98□□□□□ -0.01
CCDC40-202ENST00000374876 ALDH3A2P51648 485 aa14.98□□□□□ -0.01
CCDC40-202ENST00000374876 ARSFP54793 590 aa14.98□□□□□ -0.01
CCDC40-202ENST00000374876 ESRRGP62508 458 aa14.98□□□□□ -0.01
CCDC40-202ENST00000374876 ZNF284Q2VY69 593 aa14.98□□□□□ -0.01
CCDC40-202ENST00000374876 SYTL3Q4VX76 610 aa14.98□□□□□ -0.01
CCDC40-202ENST00000374876 WDR45BQ5MNZ6 344 aa14.98□□□□□ -0.01
CCDC40-202ENST00000374876 MICU2Q8IYU8 434 aa14.98□□□□□ -0.01
CCDC40-202ENST00000374876 ALDH16A1Q8IZ83 802 aa14.98□□□□□ -0.01
CCDC40-202ENST00000374876 CLEC4FQ8N1N0 589 aa14.98□□□□□ -0.01
CCDC40-202ENST00000374876 FAM86B1Q8N7N1 296 aa14.98□□□□□ -0.01
CCDC40-202ENST00000374876 DDHD1Q8NEL9 900 aa14.98□□□□□ -0.01
CCDC40-202ENST00000374876 TMIGD2Q96BF3 282 aa14.98□□□□□ -0.01
CCDC40-202ENST00000374876 SDCCAG3Q96C92 435 aa14.98□□□□□ -0.01
CCDC40-202ENST00000374876 SLC47A1Q96FL8 570 aa14.98□□□□□ -0.01
CCDC40-202ENST00000374876 APIPQ96GX9 242 aa14.98□□□□□ -0.01
CCDC40-202ENST00000374876 LOXL4Q96JB6 756 aa14.98□□□□□ -0.01
CCDC40-202ENST00000374876 APOLD1Q96LR9 279 aa14.98□□□□□ -0.01
CCDC40-202ENST00000374876 SLC6A13Q9NSD5 602 aa14.98□□□□□ -0.01
CCDC40-202ENST00000374876 NCDNQ9UBB6 729 aa14.98□□□□□ -0.01
CCDC40-202ENST00000374876 RSL24D1Q9UHA3 163 aaKnown RBP14.98□□□□□ -0.01
CCDC40-202ENST00000374876 GMEB2Q9UKD1 530 aa14.98□□□□□ -0.01
CCDC40-202ENST00000374876 PILRBQ9UKJ0 227 aa14.98□□□□□ -0.01
CCDC40-202ENST00000374876 MAN2B2Q9Y2E5 1009 aa14.98□□□□□ -0.01
CCDC40-202ENST00000374876 PCDHGA11Q9Y5H2 935 aa14.98□□□□□ -0.01
CCDC40-202ENST00000374876 PATE3B3GLJ2 98 aa14.97□□□□□ -0.01
CCDC40-202ENST00000374876 H0YAE9 185 aa14.97□□□□□ -0.01
CCDC40-202ENST00000374876 UPK1AO00322 258 aa14.97□□□□□ -0.01
CCDC40-202ENST00000374876 QSOX1O00391 747 aa14.97□□□□□ -0.01
CCDC40-202ENST00000374876 WNT9AO14904 365 aa14.97□□□□□ -0.01
CCDC40-202ENST00000374876 TSPAN6O43657 245 aa14.97□□□□□ -0.01
CCDC40-202ENST00000374876 SGTAO43765 313 aa14.97□□□□□ -0.01
CCDC40-202ENST00000374876 SLCO2B1O94956 709 aa14.97□□□□□ -0.01
CCDC40-202ENST00000374876 EPN2O95208 641 aa14.97□□□□□ -0.01
CCDC40-202ENST00000374876 PAK4O96013 591 aaPredicted RBP14.97□□□□□ -0.01
CCDC40-202ENST00000374876 JUPP14923 745 aa14.97□□□□□ -0.01
CCDC40-202ENST00000374876 TACR1P25103 407 aa14.97□□□□□ -0.01
CCDC40-202ENST00000374876 CCR5P51681 352 aa14.97□□□□□ -0.01
CCDC40-202ENST00000374876 PHC1P78364 1004 aa14.97□□□□□ -0.01
CCDC40-202ENST00000374876 IRF8Q02556 426 aa14.97□□□□□ -0.01
CCDC40-202ENST00000374876 SPEM2Q0P670 501 aa14.97□□□□□ -0.01
CCDC40-202ENST00000374876 ABRQ12979 859 aa14.97□□□□□ -0.01
CCDC40-202ENST00000374876 DAG1Q14118 895 aa14.97□□□□□ -0.01
CCDC40-202ENST00000374876 LRIF1Q5T3J3 769 aa14.97□□□□□ -0.01
CCDC40-202ENST00000374876 ZNF648Q5T619 568 aaPredicted RBP14.97□□□□□ -0.01
CCDC40-202ENST00000374876 HENMT1Q5T8I9 393 aaKnown RBP14.97□□□□□ -0.01
CCDC40-202ENST00000374876 ERAP2Q6P179 960 aa14.97□□□□□ -0.01
CCDC40-202ENST00000374876 STK32CQ86UX6 486 aa14.97□□□□□ -0.01
CCDC40-202ENST00000374876 ANKRD46Q86W74 232 aa14.97□□□□□ -0.01
CCDC40-202ENST00000374876 HORMAD1Q86X24 394 aa14.97□□□□□ -0.01
CCDC40-202ENST00000374876 ZDHHC13Q8IUH4 622 aa14.97□□□□□ -0.01
CCDC40-202ENST00000374876 RAVER1Q8IY67 606 aaKnown RBP14.97□□□□□ -0.01
CCDC40-202ENST00000374876 DNASE2BQ8WZ79 361 aa14.97□□□□□ -0.01
CCDC40-202ENST00000374876 TESCQ96BS2 214 aa14.97□□□□□ -0.01
CCDC40-202ENST00000374876 FBXL8Q96CD0 374 aa14.97□□□□□ -0.01
CCDC40-202ENST00000374876 FAM120BQ96EK7 910 aaKnown RBP14.97□□□□□ -0.01
CCDC40-202ENST00000374876 MYOCQ99972 504 aa14.97□□□□□ -0.01
CCDC40-202ENST00000374876 ORAI3Q9BRQ5 295 aa14.97□□□□□ -0.01
CCDC40-202ENST00000374876 PCED1AQ9H1Q7 454 aa14.97□□□□□ -0.01
CCDC40-202ENST00000374876 SOX17Q9H6I2 414 aaPredicted RBP14.97□□□□□ -0.01
CCDC40-202ENST00000374876 CARS2Q9HA77 564 aaKnown RBP14.97□□□□□ -0.01
CCDC40-202ENST00000374876 SERHLQ9NQF3 203 aa14.97□□□□□ -0.01
CCDC40-202ENST00000374876 DNAJB9Q9UBS3 223 aa14.97□□□□□ -0.01
CCDC40-202ENST00000374876 COQ6Q9Y2Z9 468 aa14.97□□□□□ -0.01
CCDC40-202ENST00000374876 DNAH14Q0VDD8 3507 aa14.97□□□□□ -0.01
CCDC40-202ENST00000374876 A0A1W2PPC4 97 aa14.97□□□□□ -0.01
CCDC40-202ENST00000374876 FADS2P1A8MWK0 482 aa14.97□□□□□ -0.01
CCDC40-202ENST00000374876 FAM220BPB1ANY3 271 aa14.97□□□□□ -0.01
CCDC40-202ENST00000374876 LRATO95237 230 aa14.97□□□□□ -0.01
CCDC40-202ENST00000374876 CST1P01037 141 aa14.97□□□□□ -0.01
CCDC40-202ENST00000374876 GSNP06396 782 aa14.97□□□□□ -0.01
CCDC40-202ENST00000374876 GSTM1P09488 218 aa14.97□□□□□ -0.01
CCDC40-202ENST00000374876 MPLP40238 635 aa14.97□□□□□ -0.01
CCDC40-202ENST00000374876 PFN3P60673 137 aa14.97□□□□□ -0.01
CCDC40-202ENST00000374876 RPS21P63220 83 aaKnown RBP14.97□□□□□ -0.01
CCDC40-202ENST00000374876 ADARB1P78563 741 aaKnown RBP14.97□□□□□ -0.01
CCDC40-202ENST00000374876 GSTM4Q03013 218 aa14.97□□□□□ -0.01
CCDC40-202ENST00000374876 FGL2Q14314 439 aa14.97□□□□□ -0.01
CCDC40-202ENST00000374876 RBBP5Q15291 538 aaKnown RBP14.97□□□□□ -0.01
CCDC40-202ENST00000374876 TRIM69Q86WT6 500 aa14.97□□□□□ -0.01
CCDC40-202ENST00000374876 SYT12Q8IV01 421 aa14.97□□□□□ -0.01
CCDC40-202ENST00000374876 OR52E4Q8NGH9 312 aa14.97□□□□□ -0.01
CCDC40-202ENST00000374876 AURKBQ96GD4 344 aaPredicted RBP14.97□□□□□ -0.01
CCDC40-202ENST00000374876 CPPED1Q9BRF8 314 aaPredicted RBP14.97□□□□□ -0.01
CCDC40-202ENST00000374876 INPP5KQ9BT40 448 aa14.97□□□□□ -0.01
CCDC40-202ENST00000374876 FZD3Q9NPG1 666 aa14.97□□□□□ -0.01
CCDC40-202ENST00000374876 CA5BQ9Y2D0 317 aa14.97□□□□□ -0.01
CCDC40-202ENST00000374876 EP300Q09472 2414 aaPredicted RBP14.96□□□□□ -0.01
CCDC40-202ENST00000374876 RALGAPA1Q6GYQ0 2036 aa14.96□□□□□ -0.01
CCDC40-202ENST00000374876 TNRC6BQ9UPQ9 1833 aaKnown RBP14.96□□□□□ -0.01
CCDC40-202ENST00000374876 NPIPB8E9PQR5 432 aa14.96□□□□□ -0.01
CCDC40-202ENST00000374876 G3V2T6 193 aa14.96□□□□□ -0.01
CCDC40-202ENST00000374876 GNGT2O14610 69 aa14.96□□□□□ -0.01
CCDC40-202ENST00000374876 LATO43561 262 aa14.96□□□□□ -0.01
CCDC40-202ENST00000374876 PRAMEF4O60810 478 aa14.96□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms