RNA–Protein interactions for RNA: ENST00000374673.3

HSPG2-201, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 3

Gene HSPG2, Length 538 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-201ENST00000374673 GARNL3Q5VVW2 1013 aa14.32□□□□□ -0.12
HSPG2-201ENST00000374673 MED27Q6P2C8 311 aa14.32□□□□□ -0.12
HSPG2-201ENST00000374673 ZFAND4Q86XD8 727 aa14.32□□□□□ -0.12
HSPG2-201ENST00000374673 DTX1Q86Y01 620 aa14.32□□□□□ -0.12
HSPG2-201ENST00000374673 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP14.32□□□□□ -0.12
HSPG2-201ENST00000374673 ARHGEF39Q8N4T4 335 aa14.32□□□□□ -0.12
HSPG2-201ENST00000374673 SLC38A9Q8NBW4 561 aa14.32□□□□□ -0.12
HSPG2-201ENST00000374673 TRPV3Q8NET8 790 aa14.32□□□□□ -0.12
HSPG2-201ENST00000374673 OR4F6Q8NGB9 312 aa14.32□□□□□ -0.12
HSPG2-201ENST00000374673 NT5CQ8TCD5 201 aa14.32□□□□□ -0.12
HSPG2-201ENST00000374673 PROKR1Q8TCW9 393 aa14.32□□□□□ -0.12
HSPG2-201ENST00000374673 TRPC4APQ8TEL6 797 aa14.32□□□□□ -0.12
HSPG2-201ENST00000374673 SLC13A3Q8WWT9 602 aa14.32□□□□□ -0.12
HSPG2-201ENST00000374673 CLIP3Q96DZ5 547 aa14.32□□□□□ -0.12
HSPG2-201ENST00000374673 MOCOSQ96EN8 888 aa14.32□□□□□ -0.12
HSPG2-201ENST00000374673 ZNF382Q96SR6 550 aa14.32□□□□□ -0.12
HSPG2-201ENST00000374673 NDC1Q9BTX1 674 aa14.32□□□□□ -0.12
HSPG2-201ENST00000374673 MECRQ9BV79 373 aa14.32□□□□□ -0.12
HSPG2-201ENST00000374673 SLC7A5P2Q9GIP4 190 aa14.32□□□□□ -0.12
HSPG2-201ENST00000374673 RHBGQ9H310 441 aa14.32□□□□□ -0.12
HSPG2-201ENST00000374673 ACSS2Q9NR19 701 aa14.32□□□□□ -0.12
HSPG2-201ENST00000374673 CUTCQ9NTM9 273 aa14.32□□□□□ -0.12
HSPG2-201ENST00000374673 TRPS1Q9UHF7 1281 aa14.32□□□□□ -0.12
HSPG2-201ENST00000374673 ZNF490Q9ULM2 529 aaPredicted RBP14.32□□□□□ -0.12
HSPG2-201ENST00000374673 HYKKA2RU49 373 aa14.31□□□□□ -0.12
HSPG2-201ENST00000374673 TMEM8BA6NDV4 472 aa14.31□□□□□ -0.12
HSPG2-201ENST00000374673 ANKDD1BA6NHY2 528 aa14.31□□□□□ -0.12
HSPG2-201ENST00000374673 H0YIV9 168 aa14.31□□□□□ -0.12
HSPG2-201ENST00000374673 PPP6CO00743 305 aa14.31□□□□□ -0.12
HSPG2-201ENST00000374673 BIRC5O15392 142 aa14.31□□□□□ -0.12
HSPG2-201ENST00000374673 NDUFS4O43181 175 aa14.31□□□□□ -0.12
HSPG2-201ENST00000374673 ATP8B1O43520 1251 aa14.31□□□□□ -0.12
HSPG2-201ENST00000374673 TLX3O43711 291 aaPredicted RBP14.31□□□□□ -0.12
HSPG2-201ENST00000374673 RAD1O60671 282 aa14.31□□□□□ -0.12
HSPG2-201ENST00000374673 CLEC3AO75596 197 aa14.31□□□□□ -0.12
HSPG2-201ENST00000374673 TSPAN8P19075 237 aa14.31□□□□□ -0.12
HSPG2-201ENST00000374673 SERPINB1P30740 379 aa14.31□□□□□ -0.12
HSPG2-201ENST00000374673 SERPINB4P48594 390 aa14.31□□□□□ -0.12
HSPG2-201ENST00000374673 LCP2Q13094 533 aa14.31□□□□□ -0.12
HSPG2-201ENST00000374673 GPS2Q13227 327 aa14.31□□□□□ -0.12
HSPG2-201ENST00000374673 MUM1Q2TAK8 710 aa14.31□□□□□ -0.12
HSPG2-201ENST00000374673 ZNF385CQ66K41 422 aaPredicted RBP14.31□□□□□ -0.12
HSPG2-201ENST00000374673 C6orf15Q6UXA7 325 aaPredicted RBP14.31□□□□□ -0.12
HSPG2-201ENST00000374673 FRMD7Q6ZUT3 714 aa14.31□□□□□ -0.12
HSPG2-201ENST00000374673 TIPARPQ7Z3E1 657 aaKnown RBP14.31□□□□□ -0.12
HSPG2-201ENST00000374673 MILR1Q7Z6M3 343 aa14.31□□□□□ -0.12
HSPG2-201ENST00000374673 MYLK4Q86YV6 388 aaPredicted RBP14.31□□□□□ -0.12
HSPG2-201ENST00000374673 DSELQ8IZU8 1212 aa14.31□□□□□ -0.12
HSPG2-201ENST00000374673 NLGN4XQ8N0W4 816 aa14.31□□□□□ -0.12
HSPG2-201ENST00000374673 ESX1Q8N693 406 aa14.31□□□□□ -0.12
HSPG2-201ENST00000374673 CCNYL1Q8N7R7 359 aa14.31□□□□□ -0.12
HSPG2-201ENST00000374673 GALNT6Q8NCL4 622 aa14.31□□□□□ -0.12
HSPG2-201ENST00000374673 NLGN4YQ8NFZ3 816 aaPredicted RBP14.31□□□□□ -0.12
HSPG2-201ENST00000374673 CREB3L4Q8TEY5 395 aa14.31□□□□□ -0.12
HSPG2-201ENST00000374673 SREK1Q8WXA9 508 aaKnown RBP14.31□□□□□ -0.12
HSPG2-201ENST00000374673 REPS1Q96D71 796 aa14.31□□□□□ -0.12
HSPG2-201ENST00000374673 C10orf90Q96M02 699 aa14.31□□□□□ -0.12
HSPG2-201ENST00000374673 CDK15Q96Q40 435 aa14.31□□□□□ -0.12
HSPG2-201ENST00000374673 GATA5Q9BWX5 397 aaPredicted RBP14.31□□□□□ -0.12
HSPG2-201ENST00000374673 DRC3Q9H069 523 aa14.31□□□□□ -0.12
HSPG2-201ENST00000374673 ADGRE2Q9UHX3 823 aa14.31□□□□□ -0.12
HSPG2-201ENST00000374673 ZNF225Q9UK10 706 aa14.31□□□□□ -0.12
HSPG2-201ENST00000374673 RNF11Q9Y3C5 154 aa14.31□□□□□ -0.12
HSPG2-201ENST00000374673 PCDHGA11Q9Y5H2 935 aa14.31□□□□□ -0.12
HSPG2-201ENST00000374673 A0A1B0GTL3 188 aa14.3□□□□□ -0.12
HSPG2-201ENST00000374673 A0A1B0GX78 115 aa14.3□□□□□ -0.12
HSPG2-201ENST00000374673 H3BQF6 201 aa14.3□□□□□ -0.12
HSPG2-201ENST00000374673 DSCR3O14972 297 aa14.3□□□□□ -0.12
HSPG2-201ENST00000374673 NPHS1O60500 1241 aa14.3□□□□□ -0.12
HSPG2-201ENST00000374673 OR4F21O95013 312 aa14.3□□□□□ -0.12
HSPG2-201ENST00000374673 MED26O95402 600 aa14.3□□□□□ -0.12
HSPG2-201ENST00000374673 SERPINA6P08185 405 aa14.3□□□□□ -0.12
HSPG2-201ENST00000374673 ARL1P40616 181 aaPredicted RBP14.3□□□□□ -0.12
HSPG2-201ENST00000374673 PKNOX1P55347 436 aa14.3□□□□□ -0.12
HSPG2-201ENST00000374673 CYP4F2P78329 520 aa14.3□□□□□ -0.12
HSPG2-201ENST00000374673 RGS1Q08116 209 aa14.3□□□□□ -0.12
HSPG2-201ENST00000374673 HYAL2Q12891 473 aa14.3□□□□□ -0.12
HSPG2-201ENST00000374673 FAM53BQ14153 422 aa14.3□□□□□ -0.12
HSPG2-201ENST00000374673 CPSF6Q16630 551 aaKnown RBP eCLIP14.3□□□□□ -0.12
HSPG2-201ENST00000374673 NDUFA9Q16795 377 aa14.3□□□□□ -0.12
HSPG2-201ENST00000374673 CFAP157Q5JU67 520 aa14.3□□□□□ -0.12
HSPG2-201ENST00000374673 TMEM214Q6NUQ4 689 aaKnown RBP14.3□□□□□ -0.12
HSPG2-201ENST00000374673 LETMD1Q6P1Q0 360 aa14.3□□□□□ -0.12
HSPG2-201ENST00000374673 ZNF517Q6ZMY9 492 aaPredicted RBP14.3□□□□□ -0.12
HSPG2-201ENST00000374673 TTLL10Q6ZVT0 673 aa14.3□□□□□ -0.12
HSPG2-201ENST00000374673 VN1R5Q7Z5H4 357 aa14.3□□□□□ -0.12
HSPG2-201ENST00000374673 ANKRD42Q8N9B4 389 aa14.3□□□□□ -0.12
HSPG2-201ENST00000374673 ZNF248Q8NDW4 579 aa14.3□□□□□ -0.12
HSPG2-201ENST00000374673 OR7G3Q8NG95 312 aa14.3□□□□□ -0.12
HSPG2-201ENST00000374673 OR6Y1Q8NGX8 325 aa14.3□□□□□ -0.12
HSPG2-201ENST00000374673 WDR20Q8TBZ3 569 aa14.3□□□□□ -0.12
HSPG2-201ENST00000374673 AGAP11Q8TF27 550 aa14.3□□□□□ -0.12
HSPG2-201ENST00000374673 ZNF473Q8WTR7 871 aaKnown RBP14.3□□□□□ -0.12
HSPG2-201ENST00000374673 RNF31Q96EP0 1072 aa14.3□□□□□ -0.12
HSPG2-201ENST00000374673 MVB12AQ96EY5 273 aa14.3□□□□□ -0.12
HSPG2-201ENST00000374673 CNDP1Q96KN2 507 aa14.3□□□□□ -0.12
HSPG2-201ENST00000374673 GBP5Q96PP8 586 aa14.3□□□□□ -0.12
HSPG2-201ENST00000374673 DPH2Q9BQC3 489 aaPredicted RBP14.3□□□□□ -0.12
HSPG2-201ENST00000374673 TRMOQ9BU70 441 aa14.3□□□□□ -0.12
HSPG2-201ENST00000374673 SLC6A16Q9GZN6 736 aa14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms