RNA–Protein interactions for RNA: ENST00000372621.8

CTPS1-202, Transcript of CTP synthase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTPS1, Length 3,201 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTPS1-202ENST00000372621 EPS8L2Q9H6S3 715 aa12.29□□□□□ -0.44
CTPS1-202ENST00000372621 GPATCH2Q9NW75 528 aa12.29□□□□□ -0.44
CTPS1-202ENST00000372621 NDUFAF4Q9P032 175 aa12.29□□□□□ -0.44
CTPS1-202ENST00000372621 CORO2BQ9UQ03 480 aa12.29□□□□□ -0.44
CTPS1-202ENST00000372621 LYVE1Q9Y5Y7 322 aa12.29□□□□□ -0.44
CTPS1-202ENST00000372621 TMEM202A6NGA9 273 aa12.29□□□□□ -0.44
CTPS1-202ENST00000372621 BNIP3LO60238 219 aa12.29□□□□□ -0.44
CTPS1-202ENST00000372621 PPP5CP53041 499 aa12.29□□□□□ -0.44
CTPS1-202ENST00000372621 SELENOWP63302 87 aa12.29□□□□□ -0.44
CTPS1-202ENST00000372621 DNASE1L3Q13609 305 aa12.29□□□□□ -0.44
CTPS1-202ENST00000372621 CPTPQ5TA50 214 aa12.29□□□□□ -0.44
CTPS1-202ENST00000372621 PAGE2Q7Z2X7 111 aa12.29□□□□□ -0.44
CTPS1-202ENST00000372621 CHTF18Q8WVB6 975 aa12.29□□□□□ -0.44
CTPS1-202ENST00000372621 ASZ1Q8WWH4 475 aa12.29□□□□□ -0.44
CTPS1-202ENST00000372621 HERC2P3Q9BVR0 1158 aa12.29□□□□□ -0.44
CTPS1-202ENST00000372621 ADPRHL2Q9NX46 363 aa12.29□□□□□ -0.44
CTPS1-202ENST00000372621 VPS4AQ9UN37 437 aa12.29□□□□□ -0.44
CTPS1-202ENST00000372621 EXO1Q9UQ84 846 aaKnown RBP12.29□□□□□ -0.44
CTPS1-202ENST00000372621 SH3BP1Q9Y3L3 701 aa12.29□□□□□ -0.44
CTPS1-202ENST00000372621 HELZP42694 1942 aaKnown RBP12.29□□□□□ -0.44
CTPS1-202ENST00000372621 AQP9O43315 295 aa12.28□□□□□ -0.44
CTPS1-202ENST00000372621 POP4O95707 220 aaKnown RBP12.28□□□□□ -0.44
CTPS1-202ENST00000372621 VIPP01282 170 aa12.28□□□□□ -0.44
CTPS1-202ENST00000372621 CTSAP10619 480 aa12.28□□□□□ -0.44
CTPS1-202ENST00000372621 PPIBP23284 216 aaKnown RBP12.28□□□□□ -0.44
CTPS1-202ENST00000372621 C21orf33P30042 268 aaPredicted RBP12.28□□□□□ -0.44
CTPS1-202ENST00000372621 HNF4AP41235 474 aa12.28□□□□□ -0.44
CTPS1-202ENST00000372621 SLC19A1P41440 591 aa12.28□□□□□ -0.44
CTPS1-202ENST00000372621 ASMTP46597 345 aa12.28□□□□□ -0.44
CTPS1-202ENST00000372621 E2F2Q14209 437 aa12.28□□□□□ -0.44
CTPS1-202ENST00000372621 TBCEQ15813 527 aaPredicted RBP12.28□□□□□ -0.44
CTPS1-202ENST00000372621 DDX59Q5T1V6 619 aaKnown RBP eCLIP12.28□□□□□ -0.44
CTPS1-202ENST00000372621 GPR153Q6NV75 609 aa12.28□□□□□ -0.44
CTPS1-202ENST00000372621 CCDC103Q8IW40 242 aa12.28□□□□□ -0.44
CTPS1-202ENST00000372621 NPAS3Q8IXF0 933 aa12.28□□□□□ -0.44
CTPS1-202ENST00000372621 CMTM8Q8IZV2 173 aa12.28□□□□□ -0.44
CTPS1-202ENST00000372621 NAGSQ8N159 534 aa12.28□□□□□ -0.44
CTPS1-202ENST00000372621 C1orf52Q8N6N3 182 aaKnown RBP12.28□□□□□ -0.44
CTPS1-202ENST00000372621 OR4C15Q8NGM1 316 aa12.28□□□□□ -0.44
CTPS1-202ENST00000372621 PXYLP1Q8TE99 480 aa12.28□□□□□ -0.44
CTPS1-202ENST00000372621 CLP1Q92989 425 aaKnown RBP12.28□□□□□ -0.44
CTPS1-202ENST00000372621 SCAMP4Q969E2 229 aa12.28□□□□□ -0.44
CTPS1-202ENST00000372621 ZHX1-C8orf76Q96EF9 292 aa12.28□□□□□ -0.44
CTPS1-202ENST00000372621 KCNC2Q96PR1 638 aa12.28□□□□□ -0.44
CTPS1-202ENST00000372621 COPS4Q9BT78 406 aa12.28□□□□□ -0.44
CTPS1-202ENST00000372621 PCDH7O60245 1069 aa12.28□□□□□ -0.44
CTPS1-202ENST00000372621 AP2A2O94973 939 aa12.28□□□□□ -0.44
CTPS1-202ENST00000372621 CKMP06732 381 aa12.28□□□□□ -0.44
CTPS1-202ENST00000372621 GABRR2P28476 465 aa12.28□□□□□ -0.44
CTPS1-202ENST00000372621 EIF2DP41214 584 aaKnown RBP12.28□□□□□ -0.44
CTPS1-202ENST00000372621 TUBA1BP68363 451 aa12.28□□□□□ -0.44
CTPS1-202ENST00000372621 DDX39BQ13838 428 aaKnown RBP12.28□□□□□ -0.44
CTPS1-202ENST00000372621 NCCRP1Q6ZVX7 275 aaPredicted RBP12.28□□□□□ -0.44
CTPS1-202ENST00000372621 TUBA1AQ71U36 451 aa12.28□□□□□ -0.44
CTPS1-202ENST00000372621 SLC39A11Q8N1S5 342 aa12.28□□□□□ -0.44
CTPS1-202ENST00000372621 CHST14Q8NCH0 376 aa12.28□□□□□ -0.44
CTPS1-202ENST00000372621 AUTS2Q8WXX7 1259 aa12.28□□□□□ -0.44
CTPS1-202ENST00000372621 FEVQ99581 238 aa12.28□□□□□ -0.44
CTPS1-202ENST00000372621 CEP44Q9C0F1 390 aa12.28□□□□□ -0.44
CTPS1-202ENST00000372621 DCSTAMPQ9H295 470 aa12.28□□□□□ -0.44
CTPS1-202ENST00000372621 ZBTB20Q9HC78 741 aaPredicted RBP12.28□□□□□ -0.44
CTPS1-202ENST00000372621 SCHIP1Q9P0W5 487 aaPredicted RBP12.28□□□□□ -0.44
CTPS1-202ENST00000372621 STOX2Q9P2F5 926 aaPredicted RBP12.28□□□□□ -0.44
CTPS1-202ENST00000372621 RNASET2O00584 256 aaKnown RBP12.28□□□□□ -0.44
CTPS1-202ENST00000372621 GABRB1P18505 474 aa12.28□□□□□ -0.44
CTPS1-202ENST00000372621 CD40LGP29965 261 aa12.28□□□□□ -0.44
CTPS1-202ENST00000372621 AQP1P29972 269 aa12.28□□□□□ -0.44
CTPS1-202ENST00000372621 LIMK1P53667 647 aa12.28□□□□□ -0.44
CTPS1-202ENST00000372621 ELP6Q0PNE2 266 aa12.28□□□□□ -0.44
CTPS1-202ENST00000372621 CCSMST1Q4G0I0 132 aa12.28□□□□□ -0.44
CTPS1-202ENST00000372621 ANXA8L1Q5VT79 327 aa12.28□□□□□ -0.44
CTPS1-202ENST00000372621 ASTLQ6HA08 431 aaPredicted RBP12.28□□□□□ -0.44
CTPS1-202ENST00000372621 AGTRAPQ6RW13 159 aa12.28□□□□□ -0.44
CTPS1-202ENST00000372621 PLD3Q8IV08 490 aa12.28□□□□□ -0.44
CTPS1-202ENST00000372621 LACC1Q8IV20 430 aa12.28□□□□□ -0.44
CTPS1-202ENST00000372621 DNAJC22Q8N4W6 341 aa12.28□□□□□ -0.44
CTPS1-202ENST00000372621 CDC26Q8NHZ8 85 aa12.28□□□□□ -0.44
CTPS1-202ENST00000372621 SGK2Q9HBY8 427 aa12.28□□□□□ -0.44
CTPS1-202ENST00000372621 PNMA8BQ9ULN7 279 aaPredicted RBP12.28□□□□□ -0.44
CTPS1-202ENST00000372621 TRIM17Q9Y577 477 aa12.28□□□□□ -0.44
CTPS1-202ENST00000372621 METTL15A6NJ78 407 aa12.27□□□□□ -0.44
CTPS1-202ENST00000372621 NPC1O15118 1278 aa12.27□□□□□ -0.44
CTPS1-202ENST00000372621 MYO1DO94832 1006 aa12.27□□□□□ -0.44
CTPS1-202ENST00000372621 INHAP05111 366 aa12.27□□□□□ -0.44
CTPS1-202ENST00000372621 ANXA4P09525 319 aaPredicted RBP12.27□□□□□ -0.44
CTPS1-202ENST00000372621 DCDC1P59894 354 aa12.27□□□□□ -0.44
CTPS1-202ENST00000372621 PPIGQ13427 754 aaKnown RBP eCLIP12.27□□□□□ -0.441e-7■■□□□ 12.7
CTPS1-202ENST00000372621 TEAD4Q15561 434 aa12.27□□□□□ -0.44
CTPS1-202ENST00000372621 SYT16Q17RD7 645 aa12.27□□□□□ -0.44
CTPS1-202ENST00000372621 HSD11B1LQ7Z5J1 315 aa12.27□□□□□ -0.44
CTPS1-202ENST00000372621 TMC8Q8IU68 726 aa12.27□□□□□ -0.44
CTPS1-202ENST00000372621 GOT1L1Q8NHS2 421 aaPredicted RBP12.27□□□□□ -0.44
CTPS1-202ENST00000372621 PROX1Q92786 737 aa12.27□□□□□ -0.44
CTPS1-202ENST00000372621 GGHQ92820 318 aa12.27□□□□□ -0.44
CTPS1-202ENST00000372621 MMP27Q9H306 513 aa12.27□□□□□ -0.44
CTPS1-202ENST00000372621 SLCO3A1Q9UIG8 710 aa12.27□□□□□ -0.44
CTPS1-202ENST00000372621 ZNF451Q9Y4E5 1061 aa12.27□□□□□ -0.44
CTPS1-202ENST00000372621 PCDHGA2Q9Y5H1 932 aa12.27□□□□□ -0.44
CTPS1-202ENST00000372621 DOCK6Q96HP0 2047 aa12.27□□□□□ -0.45
CTPS1-202ENST00000372621 PRAMEF25A6NGN4 478 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms